RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	KTR4	P38131	464 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	MAL31	P38156	614 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	FUI1	P38196	639 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	CHS7	P38843	316 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	PIP2	P52960	996 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	SPC105	P53148	917 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	PTA1	Q01329	785 aa	Predicted RBP	2.77	□□□□□ -1.97
NCL1	YBL024W	PEX19	Q07418	342 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	PRP4	P20053	465 aa	Known RBP	2.76	□□□□□ -1.97
NCL1	YBL024W	SWE1	P32944	819 aa		2.76	□□□□□ -1.97
NCL1	YBL024W	VPS24	P36095	224 aa	Known RBP	2.76	□□□□□ -1.97
NCL1	YBL024W	BEM4	P39011	633 aa		2.76	□□□□□ -1.97
NCL1	YBL024W	MTR3	P48240	250 aa	Predicted RBP	2.76	□□□□□ -1.97
NCL1	YBL024W	SLD3	P53135	668 aa		2.76	□□□□□ -1.97
NCL1	YBL024W	MUS81	Q04149	632 aa	Predicted RBP	2.76	□□□□□ -1.97
NCL1	YBL024W	SWI6	P09959	803 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	PWP2	P25635	923 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	YKU70	P32807	602 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	AKL1	P38080	1108 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	SUL1	P38359	859 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	PFA3	P42836	336 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	RSC8	P43609	557 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	UBA2	P52488	636 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	TRP4	P07285	380 aa	Predicted RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	MET3	P08536	511 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	TUB3	P09734	445 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	GLN4	P13188	809 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	HCA4	P20448	770 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	ERG4	P25340	473 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	KCC4	P25389	1037 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	SEC21	P32074	935 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	YHR202W	P38887	602 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	RRP8	P38961	392 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	PZF1	P39933	429 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	IES5	P40060	125 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	EMP65	P40085	556 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	VHR1	P40522	640 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	ASI2	P53895	289 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	NOP15	P53927	220 aa	Predicted RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	SLU7	Q02775	382 aa	Known RBP	2.75	□□□□□ -1.97
NCL1	YBL024W	YLR407W	Q06070	228 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	PEX15	Q08215	383 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	LAS17	Q12446	633 aa		2.75	□□□□□ -1.97
NCL1	YBL024W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
NCL1	YBL024W	CDC26	P14724	124 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	TRX2	P22803	104 aa	Known RBP	2.74	□□□□□ -1.97
NCL1	YBL024W	PTP2	P29461	750 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	NGG1	P32494	702 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	OAR1	P35731	278 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	TRZ1	P36159	838 aa	Predicted RBP	2.74	□□□□□ -1.97
NCL1	YBL024W	BFA1	P47113	574 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	RNR4	P49723	345 aa	Known RBP	2.74	□□□□□ -1.97
NCL1	YBL024W	UBX4	P54730	416 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	ORC4	P54791	529 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	GPD1	Q00055	391 aa	Known RBP	2.74	□□□□□ -1.97
NCL1	YBL024W	RNT1	Q02555	471 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	ATG16	Q03818	150 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	BUD21	Q08492	214 aa	Predicted RBP	2.74	□□□□□ -1.97
NCL1	YBL024W	TRM11	Q12463	433 aa		2.74	□□□□□ -1.97
NCL1	YBL024W	PGI1	P12709	554 aa	Known RBP	2.73	□□□□□ -1.97
NCL1	YBL024W	IMG2	P25642	146 aa	Predicted RBP	2.73	□□□□□ -1.97
NCL1	YBL024W	YKR075C	P36155	307 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	VID28	P40547	921 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	SET2	P46995	733 aa	Known RBP	2.73	□□□□□ -1.97
NCL1	YBL024W	SLI1	P53304	468 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	TIM44	Q01852	431 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	YPS7	Q06325	596 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	YLR040C	Q07988	224 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	YOL073C	Q08232	322 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	APA1	P16550	321 aa	Known RBP	2.73	□□□□□ -1.97
NCL1	YBL024W	ADE2	P21264	571 aa	Known RBP	2.73	□□□□□ -1.97
NCL1	YBL024W	YKL133C	P36066	463 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	GID8	P40208	455 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	HIS6	P40545	261 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	YGR021W	P53212	290 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	PKH1	Q03407	766 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	DLT1	Q04216	342 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	ECM16	Q04217	1267 aa	Known RBP	2.73	□□□□□ -1.97
NCL1	YBL024W	MLC2	Q06580	163 aa		2.73	□□□□□ -1.97
NCL1	YBL024W	RRP6	Q12149	733 aa	Known RBP	2.73	□□□□□ -1.97
NCL1	YBL024W	YLR415C	O13578	112 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	RPS17A	P02407	136 aa	Known RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	RPS17B	P14127	136 aa	Known RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	HXT4	P32467	576 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	MOH1	P38191	138 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	APN2	P38207	520 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	YHL041W	P38730	149 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	EAF5	P39995	279 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	IES1	P43579	692 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	BUL1	P48524	976 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	PRP31	P49704	494 aa	Predicted RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	SUB1	P54000	292 aa	Known RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	CEG1	Q01159	459 aa	Predicted RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	ARG5,6	Q01217	863 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	YMR210W	Q03649	449 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	OMS1	Q06668	471 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	ISA1	Q07821	250 aa	Predicted RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	NGL1	Q08213	363 aa	Known RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	CWC2	Q12046	339 aa	Predicted RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	ALG7	P07286	448 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms