RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	GPP2	P40106	250 aa	Known RBP	5.71	□□□□□ -1.5
ECM1	YAL059W	YIL108W	P40483	696 aa	Known RBP	5.71	□□□□□ -1.5
ECM1	YAL059W	HDA1	P53973	706 aa		5.71	□□□□□ -1.5
ECM1	YAL059W	KCS1	Q12494	1050 aa		5.71	□□□□□ -1.5
ECM1	YAL059W	RPS9A	O13516	197 aa	Known RBP	5.7	□□□□□ -1.5
ECM1	YAL059W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
ECM1	YAL059W	PHO81	P17442	1178 aa		5.7	□□□□□ -1.5
ECM1	YAL059W	PRP19	P32523	503 aa	Known RBP	5.7	□□□□□ -1.5
ECM1	YAL059W	SPC29	P33419	253 aa		5.7	□□□□□ -1.5
ECM1	YAL059W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
ECM1	YAL059W	GIP4	P39732	760 aa		5.7	□□□□□ -1.5
ECM1	YAL059W	NCS6	P53088	359 aa		5.7	□□□□□ -1.5
ECM1	YAL059W	MCM6	P53091	1017 aa	Known RBP	5.7	□□□□□ -1.5
ECM1	YAL059W	YGR016W	P53209	190 aa		5.7	□□□□□ -1.5
ECM1	YAL059W	PRP3	Q03338	469 aa	Predicted RBP	5.7	□□□□□ -1.5
ECM1	YAL059W	SPN1	Q06505	410 aa	Predicted RBP	5.7	□□□□□ -1.5
ECM1	YAL059W	PSR1	Q07800	427 aa		5.7	□□□□□ -1.5
ECM1	YAL059W	UPC2	Q12151	913 aa		5.7	□□□□□ -1.5
ECM1	YAL059W	DAL7	P21826	554 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	RAD53	P22216	821 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	YCR015C	P25616	317 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	ECM32	P32644	1121 aa	Known RBP	5.69	□□□□□ -1.5
ECM1	YAL059W	NIT2	P47016	307 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	YJR096W	P47137	282 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	TAD1	P53065	400 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	MET13	P53128	600 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	DAM1	P53267	343 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	PKH1	Q03407	766 aa		5.69	□□□□□ -1.5
ECM1	YAL059W	YTM1	Q12024	460 aa	Predicted RBP	5.69	□□□□□ -1.5
ECM1	YAL059W	CLF1	Q12309	687 aa	Predicted RBP	5.69	□□□□□ -1.5
ECM1	YAL059W	FBP1	P09201	348 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	PFK1	P16861	987 aa	Known RBP	5.68	□□□□□ -1.5
ECM1	YAL059W	SED4	P25365	1065 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	STE14	P32584	239 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	BEM3	P32873	1128 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	SHM2	P37291	469 aa	Known RBP	5.68	□□□□□ -1.5
ECM1	YAL059W	RKM3	P38222	552 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	VPS8	P39702	1274 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	SGM1	P47166	707 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	MNN10	P50108	393 aa	Known RBP	5.68	□□□□□ -1.5
ECM1	YAL059W	ATP22	P50273	684 aa	Predicted RBP	5.68	□□□□□ -1.5
ECM1	YAL059W	PUS2	P53167	370 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	BTN2	P53286	410 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	NOG2	P53742	486 aa	Known RBP	5.68	□□□□□ -1.5
ECM1	YAL059W	GTR1	Q00582	310 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	MET7	Q08645	548 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	HSP42	Q12329	375 aa		5.68	□□□□□ -1.5
ECM1	YAL059W	RAD18	P10862	487 aa		5.67	□□□□□ -1.5
ECM1	YAL059W	KRR1	P25586	316 aa	Predicted RBP	5.67	□□□□□ -1.5
ECM1	YAL059W	RXT2	P38255	430 aa		5.67	□□□□□ -1.5
ECM1	YAL059W	CTF8	P38877	133 aa		5.67	□□□□□ -1.5
ECM1	YAL059W	SDP1	P40479	209 aa		5.67	□□□□□ -1.5
ECM1	YAL059W	EXG2	P52911	562 aa		5.67	□□□□□ -1.5
ECM1	YAL059W	NPY1	P53164	384 aa		5.67	□□□□□ -1.5
ECM1	YAL059W	MEP3	P53390	489 aa		5.67	□□□□□ -1.5
ECM1	YAL059W	ATP25	Q03153	612 aa		5.67	□□□□□ -1.5
ECM1	YAL059W	LRS4	Q04087	347 aa	Known RBP	5.67	□□□□□ -1.5
ECM1	YAL059W	YCL002C	P25565	263 aa		5.66	□□□□□ -1.5
ECM1	YAL059W	CYS3	P31373	394 aa	Known RBP	5.66	□□□□□ -1.5
ECM1	YAL059W	STO1	P34160	861 aa	Known RBP	5.66	□□□□□ -1.5
ECM1	YAL059W	OAF1	P39720	1047 aa	Predicted RBP	5.66	□□□□□ -1.5
ECM1	YAL059W	ERR3	P42222	437 aa		5.66	□□□□□ -1.5
ECM1	YAL059W	TRS130	Q03660	1102 aa		5.66	□□□□□ -1.5
ECM1	YAL059W	SDH5	Q08230	162 aa		5.66	□□□□□ -1.5
ECM1	YAL059W	HAL9	Q12180	1030 aa		5.66	□□□□□ -1.5
ECM1	YAL059W	RMP1	Q12530	201 aa		5.66	□□□□□ -1.5
ECM1	YAL059W	CDC9	P04819	755 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	SRD1	P09007	221 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	MRP7	P12687	371 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	SFL1	P20134	766 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	RER1	P25560	188 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	YEL1	P34225	687 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	NOP4	P37838	685 aa	Known RBP	5.65	□□□□□ -1.5
ECM1	YAL059W	BCD1	P38772	366 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	CKB2	P38930	258 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	GPD2	P41911	440 aa	Known RBP	5.65	□□□□□ -1.5
ECM1	YAL059W	VTI1	Q04338	217 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	YDR514C	Q04408	483 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	GUD1	Q07729	489 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	YOR022C	Q12204	715 aa		5.65	□□□□□ -1.5
ECM1	YAL059W	SSM4	P40318	1319 aa		5.65	□□□□□ -1.51
ECM1	YAL059W	FUR1	P18562	216 aa	Known RBP	5.64	□□□□□ -1.51
ECM1	YAL059W	KAR4	P25583	335 aa		5.64	□□□□□ -1.51
ECM1	YAL059W	AAD3	P25612	363 aa		5.64	□□□□□ -1.51
ECM1	YAL059W	PER1	P25625	357 aa		5.64	□□□□□ -1.51
ECM1	YAL059W	PCL2	P25693	308 aa		5.64	□□□□□ -1.51
ECM1	YAL059W	YKL100C	P34248	587 aa		5.64	□□□□□ -1.51
ECM1	YAL059W	BIT2	P38346	545 aa		5.64	□□□□□ -1.51
ECM1	YAL059W	DUS1	P53759	423 aa	Known RBP	5.64	□□□□□ -1.51
ECM1	YAL059W	NSE5	Q03718	556 aa		5.64	□□□□□ -1.51
ECM1	YAL059W	ENT1	Q12518	454 aa		5.64	□□□□□ -1.51
ECM1	YAL059W	PRC1	P00729	532 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	MSS18	P08593	268 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	TPM1	P17536	199 aa	Known RBP	5.63	□□□□□ -1.51
ECM1	YAL059W	SAN1	P22470	610 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	HCM1	P25364	564 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	SEC21	P32074	935 aa	Known RBP	5.63	□□□□□ -1.51
ECM1	YAL059W	DAL3	P32459	195 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	DCG1	P32460	244 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	SAP190	P36123	1033 aa		5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms