RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 GOLGA8BA8MQT2 603 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 TCERG1LQ5VWI1 586 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 LRRC43Q8N309 656 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 SMARCC2Q8TAQ2 1214 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC42Q96M95 316 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 CAPS2Q9BXY5 557 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 PPANQ9NQ55 473 aaKnown RBP12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 WDR97A6NE52 1622 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 ZNF75DP51815 510 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC122Q5T0U0 273 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 TXNDC2Q86VQ3 553 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 IFT20Q8IY31 132 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 KCNG4Q8TDN1 519 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 NGLY1Q96IV0 654 aa12.32□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC92Q53HC0 331 aaPredicted RBP12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 CFAP157Q5JU67 520 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 ATP2A2P16615 1042 aaKnown RBP12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC65Q8IXS2 484 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 AKR1B15C9JRZ8 316 aaPredicted RBP12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 ZNF76P36508 570 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 GSTA5Q7RTV2 222 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 MTUS1Q9ULD2 1270 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 AKAP2Q9Y2D5 859 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 PPFIA3O75145 1194 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 POLE2P56282 527 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 ATP2B2Q01814 1243 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 BCAS4Q8TDM0 211 aa12.31□□□□□ -0.44
KCNMA1-259ENST00000639406 RAPGEF2Q9Y4G8 1499 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 GOLGA8KD6RF30 607 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 CREB3O43889 395 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 PPARDQ03181 441 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 E2F5Q15329 346 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 MPHOSPH8Q99549 860 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 SNAPC4Q5SXM2 1469 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC26Q8TAB7 109 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 RANBP1P43487 201 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 AFMP43652 599 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 CETN1Q12798 172 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 DUSP27Q5VZP5 1158 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 NECAB1Q8N987 351 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 COMMD10Q9Y6G5 202 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 CCT5P48643 541 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 RASSF2P50749 326 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 SF3A3Q12874 501 aaKnown RBP eCLIP12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 TAOK1Q7L7X3 1001 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 SPAG5Q96R06 1193 aa12.3□□□□□ -0.44
KCNMA1-259ENST00000639406 CLTAP09496 248 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 TMEM266Q2M3C6 531 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 ERCC6LQ2NKX8 1250 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 CNGA4Q8IV77 575 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC144CPQ8IYA2 1237 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 XAB2Q9HCS7 855 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 GNL3LQ9NVN8 582 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 PPP1R9AQ9ULJ8 1098 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 SLC12A7Q9Y666 1083 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 GOLGA8AA7E2F4 631 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 UBXN1Q04323 297 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 TTF2Q9UNY4 1162 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 CEP104O60308 925 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 TEX2Q8IWB9 1127 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 FAM71BQ8TC56 605 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 TBC1D5Q92609 795 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 RAB34Q9BZG1 259 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 ANKRD30BQ9BXX2 1392 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 VPS41P49754 854 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 EXOC1Q9NV70 894 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 ALDH1L2Q3SY69 923 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 SND1Q7KZF4 910 aaKnown RBP eCLIP12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 TSC22D3Q99576 134 aa12.29□□□□□ -0.44
KCNMA1-259ENST00000639406 HNRNPH2P55795 449 aaKnown RBP12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 CALCOCO2Q13137 446 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 CXorf38Q8TB03 319 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 BEGAINQ9BUH8 593 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 FAN1Q9Y2M0 1017 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 RAD50Q92878 1312 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 BICDL2A1A5D9 508 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 NLRP5P59047 1200 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 NUCB1Q02818 461 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 TRPC3Q13507 836 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 HSP90AA5PQ58FG0 334 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 SSH1Q8WYL5 1049 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 USP5P45974 858 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 SAAL1Q96ER3 474 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 THEGQ9P2T0 379 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 IMPACTQ9P2X3 320 aa12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
KCNMA1-259ENST00000639406 SESN3P58005 492 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms