RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 RASGRF1Q13972 1273 aa18.4■□□□□ 0.54
COPS7B-224ENST00000620578 CRY2Q49AN0 593 aa18.4■□□□□ 0.54
COPS7B-224ENST00000620578 SPRYD3Q8NCJ5 442 aa18.4■□□□□ 0.54
COPS7B-224ENST00000620578 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
COPS7B-224ENST00000620578 GRAPQ13588 217 aa18.4■□□□□ 0.54
COPS7B-224ENST00000620578 GRAPLQ8TC17 118 aaPredicted RBP18.4■□□□□ 0.54
COPS7B-224ENST00000620578 HMG20BQ9P0W2 317 aa18.4■□□□□ 0.54
COPS7B-224ENST00000620578 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
COPS7B-224ENST00000620578 PIH1D3Q9NQM4 214 aaKnown RBP18.39■□□□□ 0.53
COPS7B-224ENST00000620578 ANKIB1Q9P2G1 1089 aa18.39■□□□□ 0.53
COPS7B-224ENST00000620578 ZNF219Q9P2Y4 722 aaPredicted RBP18.39■□□□□ 0.53
COPS7B-224ENST00000620578 CHRNA5P30532 468 aa18.39■□□□□ 0.53
COPS7B-224ENST00000620578 REC8O95072 547 aa18.38■□□□□ 0.53
COPS7B-224ENST00000620578 COL9A3Q14050 684 aaPredicted RBP18.38■□□□□ 0.53
COPS7B-224ENST00000620578 LSG1Q9H089 658 aaKnown RBP18.38■□□□□ 0.53
COPS7B-224ENST00000620578 NSFL1CQ9UNZ2 370 aaKnown RBP18.38■□□□□ 0.53
COPS7B-224ENST00000620578 ZBTB7AO95365 584 aa18.38■□□□□ 0.53
COPS7B-224ENST00000620578 FAM84BQ96KN1 310 aaPredicted RBP18.38■□□□□ 0.53
COPS7B-224ENST00000620578 MYO5AQ9Y4I1 1855 aaKnown RBP18.37■□□□□ 0.53
COPS7B-224ENST00000620578 KCNJ4P48050 445 aa18.37■□□□□ 0.53
COPS7B-224ENST00000620578 AKAP11Q9UKA4 1901 aa18.37■□□□□ 0.53
COPS7B-224ENST00000620578 VPS53Q5VIR6 699 aa18.37■□□□□ 0.53
COPS7B-224ENST00000620578 TAF6LQ9Y6J9 622 aa18.37■□□□□ 0.53
COPS7B-224ENST00000620578 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
COPS7B-224ENST00000620578 SRGNP10124 158 aa18.36■□□□□ 0.53
COPS7B-224ENST00000620578 GPSM2P81274 684 aa18.36■□□□□ 0.53
COPS7B-224ENST00000620578 ZNF622Q969S3 477 aaKnown RBP eCLIP18.36■□□□□ 0.53
COPS7B-224ENST00000620578 BRIP1Q9BX63 1249 aa18.36■□□□□ 0.53
COPS7B-224ENST00000620578 RASEFQ8IZ41 740 aa18.35■□□□□ 0.53
COPS7B-224ENST00000620578 SPATA5Q8NB90 893 aa18.35■□□□□ 0.53
COPS7B-224ENST00000620578 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
COPS7B-224ENST00000620578 ANKRD31Q8N7Z5 1873 aa18.35■□□□□ 0.53
COPS7B-224ENST00000620578 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
COPS7B-224ENST00000620578 OSBP2Q969R2 916 aa18.35■□□□□ 0.53
COPS7B-224ENST00000620578 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
COPS7B-224ENST00000620578 ARID4AP29374 1257 aaPredicted RBP18.34■□□□□ 0.53
COPS7B-224ENST00000620578 RBM17Q96I25 401 aaKnown RBP18.34■□□□□ 0.53
COPS7B-224ENST00000620578 ZNF804BA4D1E1 1349 aa18.34■□□□□ 0.53
COPS7B-224ENST00000620578 KLRG2A4D1S0 409 aaPredicted RBP18.33■□□□□ 0.53
COPS7B-224ENST00000620578 PSDA5PKW4 1024 aaPredicted RBP18.33■□□□□ 0.53
COPS7B-224ENST00000620578 CPA1P15085 419 aa18.33■□□□□ 0.53
COPS7B-224ENST00000620578 UBE4AQ14139 1066 aa18.33■□□□□ 0.53
COPS7B-224ENST00000620578 R3HDM1Q15032 1099 aaKnown RBP18.33■□□□□ 0.53
COPS7B-224ENST00000620578 WASHC4Q2M389 1173 aa18.33■□□□□ 0.53
COPS7B-224ENST00000620578 VPS37DQ86XT2 251 aa18.33■□□□□ 0.53
COPS7B-224ENST00000620578 PUS7LQ9H0K6 701 aaKnown RBP18.33■□□□□ 0.53
COPS7B-224ENST00000620578 M0R2C6 588 aa18.33■□□□□ 0.52
COPS7B-224ENST00000620578 ABCF2Q9UG63 623 aa18.33■□□□□ 0.52
COPS7B-224ENST00000620578 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
COPS7B-224ENST00000620578 UPF3BQ9BZI7 483 aaKnown RBP18.32■□□□□ 0.52
COPS7B-224ENST00000620578 POLLQ9UGP5 575 aa18.32■□□□□ 0.52
COPS7B-224ENST00000620578 RGPD3A6NKT7 1758 aaPredicted RBP18.32■□□□□ 0.52
COPS7B-224ENST00000620578 RGPD4Q7Z3J3 1758 aa18.32■□□□□ 0.52
COPS7B-224ENST00000620578 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
COPS7B-224ENST00000620578 SLC9C2Q5TAH2 1124 aa18.32■□□□□ 0.52
COPS7B-224ENST00000620578 PRPF40BQ6NWY9 871 aaKnown RBP18.32■□□□□ 0.52
COPS7B-224ENST00000620578 COL1A1P02452 1464 aaPredicted RBP18.31■□□□□ 0.52
COPS7B-224ENST00000620578 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
COPS7B-224ENST00000620578 C2CD5Q86YS7 1000 aa18.31■□□□□ 0.52
COPS7B-224ENST00000620578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.31■□□□□ 0.52
COPS7B-224ENST00000620578 UPF1Q92900 1129 aaKnown RBP eCLIP18.31■□□□□ 0.521e-6■■□□□ 13.9
COPS7B-224ENST00000620578 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
COPS7B-224ENST00000620578 CHAF1AQ13111 956 aaPredicted RBP18.31■□□□□ 0.52
COPS7B-224ENST00000620578 RUFY2Q8WXA3 655 aa18.31■□□□□ 0.52
COPS7B-224ENST00000620578 LARP6Q9BRS8 491 aaKnown RBP18.31■□□□□ 0.52
COPS7B-224ENST00000620578 RAD50Q92878 1312 aa18.31■□□□□ 0.52
COPS7B-224ENST00000620578 UFL1O94874 794 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
COPS7B-224ENST00000620578 MCMDC2Q4G0Z9 681 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 NOL8Q76FK4 1167 aaKnown RBP18.3■□□□□ 0.52
COPS7B-224ENST00000620578 MAST3O60307 1309 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 RIMBP2O15034 1052 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 UQCRFS1P1P0C7P4 283 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 ADCK5Q3MIX3 580 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 CAVIN4Q5BKX8 364 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 ZMYM1Q5SVZ6 1142 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 ANKRD2Q9GZV1 360 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 RBM8AQ9Y5S9 174 aaKnown RBP18.3■□□□□ 0.52
COPS7B-224ENST00000620578 A0A1B0GUL6 1792 aa18.3■□□□□ 0.52
COPS7B-224ENST00000620578 FBXO33Q7Z6M2 555 aa18.29■□□□□ 0.52
COPS7B-224ENST00000620578 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
COPS7B-224ENST00000620578 MED23Q9ULK4 1368 aa18.29■□□□□ 0.52
COPS7B-224ENST00000620578 PPEF1O14829 653 aaPredicted RBP18.29■□□□□ 0.52
COPS7B-224ENST00000620578 HIBADHP31937 336 aaKnown RBP18.29■□□□□ 0.52
COPS7B-224ENST00000620578 HSPA4P34932 840 aa18.29■□□□□ 0.52
COPS7B-224ENST00000620578 ZNF512BQ96KM6 892 aaPredicted RBP18.29■□□□□ 0.52
COPS7B-224ENST00000620578 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
COPS7B-224ENST00000620578 C6orf229H3BNL8 230 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 DTNBO60941 627 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 BBOX1O75936 387 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 PDE6BP35913 854 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 ZNF532Q9HCE3 1301 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 IRS2Q9Y4H2 1338 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 XDHP47989 1333 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 HIP1O00291 1037 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 TTLL5Q6EMB2 1281 aa18.28■□□□□ 0.52
COPS7B-224ENST00000620578 MAP4K1Q92918 833 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms