RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TUBB2BQ9BVA1 445 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 PI4KAP2A4QPH2 592 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 ATP8B2P98198 1209 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 PI4KAP1Q8N8J0 262 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 PAG1Q9NWQ8 432 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 CHPF2Q9P2E5 772 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 KRT86O43790 486 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 Q6ZUG5 572 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 CCDC144CPQ8IYA2 1237 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 SKILP12757 684 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 AKAP4Q5JQC9 854 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 ACEP12821 1306 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 ARHGEF5Q12774 1597 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 SYT1P21579 422 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 TRIM14Q14142 442 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 MSL1Q68DK7 614 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 KRT28Q7Z3Y7 464 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 APBB1IPQ7Z5R6 666 aaPredicted RBP5.19□□□□□ -1.58
CHD9-221ENST00000615216 UTP14AQ9BVJ6 771 aaKnown RBP5.19□□□□□ -1.58
CHD9-221ENST00000615216 IQCGQ9H095 443 aaKnown RBP5.19□□□□□ -1.58
CHD9-221ENST00000615216 SSX2IPQ9Y2D8 614 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 SAMM50Q9Y512 469 aa5.19□□□□□ -1.58
CHD9-221ENST00000615216 SETD1BQ9UPS6 1966 aaKnown RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 IDEP14735 1019 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 DNA2P51530 1060 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 RAB3GAP1Q15042 981 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 NBPF6Q5VWK0 638 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 KSR2Q6VAB6 950 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 NBPF5PQ86XG9 351 aaPredicted RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 RRP36Q96EU6 259 aaKnown RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 NBPF4Q96M43 638 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 RBM8AQ9Y5S9 174 aaKnown RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 GTF2F1P35269 517 aaKnown RBP eCLIP5.18□□□□□ -1.58
CHD9-221ENST00000615216 ASXL2Q76L83 1435 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 SAMD9Q5K651 1589 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 HCLS1P14317 486 aaPredicted RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 SMC5Q8IY18 1101 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 C6orf50Q9HD87 102 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 SLC4A4Q9Y6R1 1079 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 TYRO3Q06418 890 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 ATP2B3Q16720 1220 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 HEATR3Q7Z4Q2 680 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 CADPS2Q86UW7 1296 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 TFIP11Q9UBB9 837 aaKnown RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 ELP1O95163 1332 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 IGHDP01880 384 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 CLCN1P35523 988 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 NOLC1Q14978 699 aaKnown RBP eCLIP5.18□□□□□ -1.58
CHD9-221ENST00000615216 CERS3Q8IU89 383 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 PUF60Q9UHX1 559 aaKnown RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 ATP10BO94823 1461 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 MAGEB6P1A0A0J9YX57 407 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 TRIM75PA6NK02 468 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 CCDC82Q8N4S0 544 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 SPAG5Q96R06 1193 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.18□□□□□ -1.58
CHD9-221ENST00000615216 COMMD10Q9Y6G5 202 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 V9GYY5 206 aaPredicted RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 ABCC2Q92887 1545 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 C6orf229H3BNL8 230 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 SPTLC2O15270 562 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 HAND2P61296 217 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 ASIC1P78348 528 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 TTLL12Q14166 644 aaPredicted RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 CNGA4Q8IV77 575 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 IMPG2Q9BZV3 1241 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 ZBTB3Q9H5J0 574 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 HDAC9Q9UKV0 1011 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 ATP2A2P16615 1042 aaKnown RBP5.18□□□□□ -1.58
CHD9-221ENST00000615216 ATP5DP30049 168 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 VAV2P52735 878 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 NAPAP54920 295 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 CLUL1Q15846 466 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 CCDC14Q49A88 953 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 GIMAP6Q6P9H5 292 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 RUFY3Q7L099 469 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 NEK11Q8NG66 645 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 CFAP57Q96MR6 1250 aa5.18□□□□□ -1.58
CHD9-221ENST00000615216 RNF113AO15541 343 aaKnown RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 SLU7O95391 586 aaKnown RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 GNA11P29992 359 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 RFC4P35249 363 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 IDI1Q13907 227 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 NAP1L3Q99457 506 aaPredicted RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 AOPEPQ8N6M6 819 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 TMX1Q9H3N1 280 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 BABAM1Q9NWV8 329 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 CYP7A1P22680 504 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 GPTP24298 496 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 KIF5AQ12840 1032 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 KDM5DQ9BY66 1539 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 CLASP1Q7Z460 1538 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 ANKRD2Q9GZV1 360 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 GDPD2Q9HCC8 539 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 HELLSQ9NRZ9 838 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 ADGRL2O95490 1459 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 TRAPPC8Q9Y2L5 1435 aa5.17□□□□□ -1.58
CHD9-221ENST00000615216 NAA16Q6N069 864 aaPredicted RBP5.17□□□□□ -1.58
CHD9-221ENST00000615216 TICAM2Q86XR7 235 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms