RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 ATP2B3Q16720 1220 aa26.85■■□□□ 1.89
SRRM1-222ENST00000596378 ROBO1Q9Y6N7 1651 aa26.84■■□□□ 1.89
SRRM1-222ENST00000596378 A0A0G2JS52 829 aa26.84■■□□□ 1.89
SRRM1-222ENST00000596378 PPFIA3O75145 1194 aa26.84■■□□□ 1.89
SRRM1-222ENST00000596378 FOSBP53539 338 aa26.84■■□□□ 1.89
SRRM1-222ENST00000596378 NWD2Q9ULI1 1742 aa26.83■■□□□ 1.89
SRRM1-222ENST00000596378 PFKFB2O60825 505 aa26.83■■□□□ 1.89
SRRM1-222ENST00000596378 PDIA4P13667 645 aaKnown RBP26.83■■□□□ 1.89
SRRM1-222ENST00000596378 HAND2P61296 217 aa26.83■■□□□ 1.89
SRRM1-222ENST00000596378 CCT2P78371 535 aaKnown RBP26.83■■□□□ 1.89
SRRM1-222ENST00000596378 NAP1L2Q9ULW6 460 aaPredicted RBP26.83■■□□□ 1.89
SRRM1-222ENST00000596378 MYH3P11055 1940 aa26.83■■□□□ 1.89
SRRM1-222ENST00000596378 PUS7LQ9H0K6 701 aaKnown RBP26.83■■□□□ 1.89
SRRM1-222ENST00000596378 CNNM1Q9NRU3 951 aa26.83■■□□□ 1.89
SRRM1-222ENST00000596378 UBN2Q6ZU65 1347 aa26.82■■□□□ 1.88
SRRM1-222ENST00000596378 LETM1O95202 739 aaPredicted RBP26.82■■□□□ 1.88
SRRM1-222ENST00000596378 TICAM2Q86XR7 235 aa26.82■■□□□ 1.88
SRRM1-222ENST00000596378 DZIP3Q86Y13 1208 aaKnown RBP26.82■■□□□ 1.88
SRRM1-222ENST00000596378 NCOA5Q9HCD5 579 aaKnown RBP26.82■■□□□ 1.88
SRRM1-222ENST00000596378 DOT1LQ8TEK3 1739 aa26.82■■□□□ 1.88
SRRM1-222ENST00000596378 PLCH1Q4KWH8 1693 aa26.82■■□□□ 1.88
SRRM1-222ENST00000596378 ANKRD18BA2A2Z9 1011 aa26.82■■□□□ 1.88
SRRM1-222ENST00000596378 CTDNEP1O95476 244 aa26.82■■□□□ 1.88
SRRM1-222ENST00000596378 LIG1P18858 919 aa26.82■■□□□ 1.88
SRRM1-222ENST00000596378 MSNP26038 577 aaKnown RBP26.82■■□□□ 1.88
SRRM1-222ENST00000596378 MCAMP43121 646 aa26.82■■□□□ 1.88
SRRM1-222ENST00000596378 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.82■■□□□ 1.88
SRRM1-222ENST00000596378 NSUN7Q8NE18 718 aaKnown RBP26.81■■□□□ 1.88
SRRM1-222ENST00000596378 NAP1L5Q96NT1 182 aaPredicted RBP26.81■■□□□ 1.88
SRRM1-222ENST00000596378 H3BQV1 296 aa26.81■■□□□ 1.88
SRRM1-222ENST00000596378 HS1BP3Q53T59 392 aa26.81■■□□□ 1.88
SRRM1-222ENST00000596378 IFFO2Q5TF58 517 aa26.81■■□□□ 1.88
SRRM1-222ENST00000596378 FAM184AQ8NB25 1140 aa26.81■■□□□ 1.88
SRRM1-222ENST00000596378 SMARCC2Q8TAQ2 1214 aa26.81■■□□□ 1.88
SRRM1-222ENST00000596378 SPATA32Q96LK8 384 aa26.81■■□□□ 1.88
SRRM1-222ENST00000596378 FUCA2Q9BTY2 467 aa26.81■■□□□ 1.88
SRRM1-222ENST00000596378 GPHNQ9NQX3 736 aaPredicted RBP26.81■■□□□ 1.88
SRRM1-222ENST00000596378 RESTQ13127 1097 aa26.8■■□□□ 1.88
SRRM1-222ENST00000596378 ELP1O95163 1332 aa26.8■■□□□ 1.88
SRRM1-222ENST00000596378 LEO1Q8WVC0 666 aaPredicted RBP26.79■■□□□ 1.88
SRRM1-222ENST00000596378 AGXT2Q9BYV1 514 aa26.79■■□□□ 1.88
SRRM1-222ENST00000596378 AKAP11Q9UKA4 1901 aa26.79■■□□□ 1.88
SRRM1-222ENST00000596378 USP25Q9UHP3 1055 aa26.79■■□□□ 1.88
SRRM1-222ENST00000596378 NOL7Q9UMY1 257 aaKnown RBP26.79■■□□□ 1.88
SRRM1-222ENST00000596378 WNK3Q9BYP7 1800 aa26.79■■□□□ 1.88
SRRM1-222ENST00000596378 MYH7P12883 1935 aa26.79■■□□□ 1.88
SRRM1-222ENST00000596378 SLIT2O94813 1529 aa26.78■■□□□ 1.88
SRRM1-222ENST00000596378 PTPDC1A2A3K4 754 aa26.78■■□□□ 1.88
SRRM1-222ENST00000596378 VGLL2Q8N8G2 317 aa26.78■■□□□ 1.88
SRRM1-222ENST00000596378 ADAMTS2O95450 1211 aa26.78■■□□□ 1.88
SRRM1-222ENST00000596378 SCAND2PQ9GZW5 306 aaPredicted RBP26.78■■□□□ 1.88
SRRM1-222ENST00000596378 FAM177BA6PVY3 158 aa26.77■■□□□ 1.88
SRRM1-222ENST00000596378 FGAP02671 866 aa26.77■■□□□ 1.88
SRRM1-222ENST00000596378 ZFYP08048 801 aaPredicted RBP26.77■■□□□ 1.88
SRRM1-222ENST00000596378 CAMK4Q16566 473 aa26.77■■□□□ 1.88
SRRM1-222ENST00000596378 LRRFIP1Q32MZ4 808 aaKnown RBP26.77■■□□□ 1.88
SRRM1-222ENST00000596378 APPBP2Q92624 585 aa26.77■■□□□ 1.88
SRRM1-222ENST00000596378 ACSBG1Q96GR2 724 aa26.77■■□□□ 1.88
SRRM1-222ENST00000596378 MYO5AQ9Y4I1 1855 aaKnown RBP26.77■■□□□ 1.88
SRRM1-222ENST00000596378 IL6STP40189 918 aaPredicted RBP26.77■■□□□ 1.88
SRRM1-222ENST00000596378 PDE8AO60658 829 aa26.76■■□□□ 1.87
SRRM1-222ENST00000596378 PDIA3P30101 505 aaKnown RBP26.76■■□□□ 1.87
SRRM1-222ENST00000596378 HELBQ8NG08 1087 aaPredicted RBP26.76■■□□□ 1.87
SRRM1-222ENST00000596378 LLPHQ9BRT6 129 aaKnown RBP26.76■■□□□ 1.87
SRRM1-222ENST00000596378 GPAA1O43292 621 aa26.75■■□□□ 1.87
SRRM1-222ENST00000596378 MPNDQ8N594 471 aa26.75■■□□□ 1.87
SRRM1-222ENST00000596378 IMMTQ16891 758 aaKnown RBP26.74■■□□□ 1.87
SRRM1-222ENST00000596378 ZNF34Q8IZ26 560 aa26.74■■□□□ 1.87
SRRM1-222ENST00000596378 COL22A1Q8NFW1 1626 aaPredicted RBP26.74■■□□□ 1.87
SRRM1-222ENST00000596378 GOLGA6L4A6NEF3 574 aa26.74■■□□□ 1.87
SRRM1-222ENST00000596378 ERVV-1B6SEH8 477 aa26.74■■□□□ 1.87
SRRM1-222ENST00000596378 PDE8BO95263 885 aa26.74■■□□□ 1.87
SRRM1-222ENST00000596378 CEBPZQ03701 1054 aaKnown RBP26.74■■□□□ 1.87
SRRM1-222ENST00000596378 PGBD1Q96JS3 809 aa26.74■■□□□ 1.87
SRRM1-222ENST00000596378 DACT1Q9NYF0 836 aa26.74■■□□□ 1.87
SRRM1-222ENST00000596378 CCDC39Q9UFE4 941 aa26.74■■□□□ 1.87
SRRM1-222ENST00000596378 PHKA1P46020 1223 aa26.73■■□□□ 1.87
SRRM1-222ENST00000596378 UVSSAQ2YD98 709 aa26.73■■□□□ 1.87
SRRM1-222ENST00000596378 PIH1D3Q9NQM4 214 aaKnown RBP26.73■■□□□ 1.87
SRRM1-222ENST00000596378 CTNNA3Q9UI47 895 aa26.73■■□□□ 1.87
SRRM1-222ENST00000596378 ABCC12Q96J65 1359 aa26.73■■□□□ 1.87
SRRM1-222ENST00000596378 NUP62CLQ9H1M0 184 aa26.73■■□□□ 1.87
SRRM1-222ENST00000596378 ZKSCAN5Q9Y2L8 839 aa26.73■■□□□ 1.87
SRRM1-222ENST00000596378 SLC9C2Q5TAH2 1124 aa26.72■■□□□ 1.87
SRRM1-222ENST00000596378 FTOQ9C0B1 505 aaKnown RBP eCLIP26.72■■□□□ 1.87
SRRM1-222ENST00000596378 SNAP23O00161 211 aa26.72■■□□□ 1.87
SRRM1-222ENST00000596378 PTMAP06454 111 aaKnown RBP26.72■■□□□ 1.87
SRRM1-222ENST00000596378 GUCY1B3Q02153 619 aa26.72■■□□□ 1.87
SRRM1-222ENST00000596378 SUSD4Q5VX71 490 aa26.72■■□□□ 1.87
SRRM1-222ENST00000596378 SALL1Q9NSC2 1324 aa26.72■■□□□ 1.87
SRRM1-222ENST00000596378 IDH1O75874 414 aaKnown RBP26.71■■□□□ 1.87
SRRM1-222ENST00000596378 CCDC102BQ68D86 513 aa26.71■■□□□ 1.87
SRRM1-222ENST00000596378 INTS5Q6P9B9 1019 aaKnown RBP26.71■■□□□ 1.87
SRRM1-222ENST00000596378 ZNF274Q96GC6 653 aaPredicted RBP26.71■■□□□ 1.87
SRRM1-222ENST00000596378 AHDC1Q5TGY3 1603 aaPredicted RBP26.71■■□□□ 1.87
SRRM1-222ENST00000596378 ADD2P35612 726 aa26.71■■□□□ 1.87
SRRM1-222ENST00000596378 EIF5P55010 431 aaKnown RBP26.71■■□□□ 1.87
SRRM1-222ENST00000596378 DDB1Q16531 1140 aa26.71■■□□□ 1.87
SRRM1-222ENST00000596378 RAB11FIP4Q86YS3 637 aa26.71■■□□□ 1.87
SRRM1-222ENST00000596378 CKAP2LQ8IYA6 745 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms