RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 AMOTL2Q9Y2J4 779 aa8.02□□□□□ -1.13
SMAD4-203ENST00000585448 SHROOM4Q9ULL8 1493 aa8.01□□□□□ -1.13
SMAD4-203ENST00000585448 EDN3P14138 238 aa8.01□□□□□ -1.13
SMAD4-203ENST00000585448 EIF2AK2P19525 551 aaKnown RBP8.01□□□□□ -1.13
SMAD4-203ENST00000585448 CANXP27824 592 aaKnown RBP8.01□□□□□ -1.13
SMAD4-203ENST00000585448 AFF1P51825 1210 aaKnown RBP8.01□□□□□ -1.13
SMAD4-203ENST00000585448 CNGB1Q14028 1251 aaPredicted RBP8.01□□□□□ -1.13
SMAD4-203ENST00000585448 COL19A1Q14993 1142 aa8.01□□□□□ -1.13
SMAD4-203ENST00000585448 PLD4Q96BZ4 506 aa8.01□□□□□ -1.13
SMAD4-203ENST00000585448 JPH1Q9HDC5 661 aaPredicted RBP8.01□□□□□ -1.13
SMAD4-203ENST00000585448 FOXD3Q9UJU5 478 aaPredicted RBP8.01□□□□□ -1.13
SMAD4-203ENST00000585448 CNTNAP5Q8WYK1 1306 aa8.01□□□□□ -1.13
SMAD4-203ENST00000585448 SPDYE3A6NKU9 549 aa8□□□□□ -1.13
SMAD4-203ENST00000585448 MLLT1Q03111 559 aaPredicted RBP8□□□□□ -1.13
SMAD4-203ENST00000585448 GALNT12Q8IXK2 581 aa8□□□□□ -1.13
SMAD4-203ENST00000585448 SMG9Q9H0W8 520 aaKnown RBP8□□□□□ -1.13
SMAD4-203ENST00000585448 PDCL3Q9H2J4 239 aa8□□□□□ -1.13
SMAD4-203ENST00000585448 PPP4R2Q9NY27 417 aa8□□□□□ -1.13
SMAD4-203ENST00000585448 PRDM4Q9UKN5 801 aa8□□□□□ -1.13
SMAD4-203ENST00000585448 J3QW42 95 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 NFKBIEO00221 500 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 EREGO14944 169 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 CPNE3O75131 537 aaKnown RBP7.99□□□□□ -1.13
SMAD4-203ENST00000585448 GSK3AP49840 483 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 FMR1Q06787 632 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMAD4-203ENST00000585448 HFE2Q6ZVN8 426 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 NCAPG2Q86XI2 1143 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 DTWD1Q8N5C7 304 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 TRIM11Q96F44 468 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 PBX4Q9BYU1 374 aa7.99□□□□□ -1.13
SMAD4-203ENST00000585448 HSP90B1P14625 803 aaKnown RBP7.98□□□□□ -1.13
SMAD4-203ENST00000585448 ERCC3P19447 782 aa7.98□□□□□ -1.13
SMAD4-203ENST00000585448 MSL1Q68DK7 614 aa7.98□□□□□ -1.13
SMAD4-203ENST00000585448 DZANK1Q9NVP4 752 aa7.98□□□□□ -1.13
SMAD4-203ENST00000585448 KANSL3Q9P2N6 904 aa7.98□□□□□ -1.13
SMAD4-203ENST00000585448 ARID4BQ4LE39 1312 aaPredicted RBP7.98□□□□□ -1.13
SMAD4-203ENST00000585448 ZBTB7CA1YPR0 619 aa7.97□□□□□ -1.13
SMAD4-203ENST00000585448 SMNDC1O75940 238 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMAD4-203ENST00000585448 TEX2Q8IWB9 1127 aa7.97□□□□□ -1.13
SMAD4-203ENST00000585448 TMEM102Q8N9M5 508 aaPredicted RBP7.97□□□□□ -1.13
SMAD4-203ENST00000585448 TMC1Q8TDI8 760 aa7.97□□□□□ -1.13
SMAD4-203ENST00000585448 NUDT8Q8WV74 236 aa7.97□□□□□ -1.13
SMAD4-203ENST00000585448 CSRNP1Q96S65 589 aa7.97□□□□□ -1.13
SMAD4-203ENST00000585448 NIF3L1Q9GZT8 377 aa7.97□□□□□ -1.13
SMAD4-203ENST00000585448 SRA1Q9HD15 236 aaKnown RBP7.97□□□□□ -1.13
SMAD4-203ENST00000585448 EIF1AYO14602 144 aaKnown RBP7.96□□□□□ -1.14
SMAD4-203ENST00000585448 ORC1Q13415 861 aa7.96□□□□□ -1.14
SMAD4-203ENST00000585448 PEAR1Q5VY43 1037 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-203ENST00000585448 DNAJC14Q6Y2X3 702 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-203ENST00000585448 C8orf86Q6ZUL3 223 aa7.96□□□□□ -1.14
SMAD4-203ENST00000585448 BHLHE41Q9C0J9 482 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-203ENST00000585448 ADAM19Q9H013 955 aa7.96□□□□□ -1.14
SMAD4-203ENST00000585448 MUC3BQ9H195 1237 aa7.96□□□□□ -1.14
SMAD4-203ENST00000585448 BAG6P46379 1132 aa7.95□□□□□ -1.14
SMAD4-203ENST00000585448 ATP11AP98196 1134 aa7.95□□□□□ -1.14
SMAD4-203ENST00000585448 PLCB3Q01970 1234 aa7.95□□□□□ -1.14
SMAD4-203ENST00000585448 ENOX2Q16206 610 aaKnown RBP7.95□□□□□ -1.14
SMAD4-203ENST00000585448 KIAA0319Q5VV43 1072 aa7.95□□□□□ -1.14
SMAD4-203ENST00000585448 FTSJ3Q8IY81 847 aaKnown RBP7.95□□□□□ -1.14
SMAD4-203ENST00000585448 FBF1Q8TES7 1133 aa7.95□□□□□ -1.14
SMAD4-203ENST00000585448 PLVAPQ9BX97 442 aa7.95□□□□□ -1.14
SMAD4-203ENST00000585448 GZF1Q9H116 711 aaPredicted RBP7.95□□□□□ -1.14
SMAD4-203ENST00000585448 RASSF4Q9H2L5 321 aa7.95□□□□□ -1.14
SMAD4-203ENST00000585448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.95□□□□□ -1.14
SMAD4-203ENST00000585448 EEA1Q15075 1411 aa7.95□□□□□ -1.14
SMAD4-203ENST00000585448 CCER2I3L3R5 266 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 TPM2P07951 284 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 SPATA31C1P0DKV0 1188 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 COL8A1P27658 744 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 CCDC27Q2M243 656 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 WFDC8Q8IUA0 241 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 MAP4K3Q8IVH8 894 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 MAP7D2Q96T17 732 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 ZKSCAN3Q9BRR0 538 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 SUV39H2Q9H5I1 410 aa7.94□□□□□ -1.14
SMAD4-203ENST00000585448 IRS1P35568 1242 aa7.93□□□□□ -1.14
SMAD4-203ENST00000585448 RASSF7Q02833 373 aa7.93□□□□□ -1.14
SMAD4-203ENST00000585448 CEP135Q66GS9 1140 aa7.93□□□□□ -1.14
SMAD4-203ENST00000585448 DCAF11Q8TEB1 546 aa7.93□□□□□ -1.14
SMAD4-203ENST00000585448 NXPE3Q969Y0 559 aa7.93□□□□□ -1.14
SMAD4-203ENST00000585448 CCDC74AQ96AQ1 378 aa7.93□□□□□ -1.14
SMAD4-203ENST00000585448 POP1Q99575 1024 aaKnown RBP7.93□□□□□ -1.14
SMAD4-203ENST00000585448 OSMRQ99650 979 aa7.93□□□□□ -1.14
SMAD4-203ENST00000585448 TRIM33Q9UPN9 1127 aa7.93□□□□□ -1.14
SMAD4-203ENST00000585448 WRNQ14191 1432 aaPredicted RBP eCLIP7.93□□□□□ -1.14
SMAD4-203ENST00000585448 PDE2AO00408 941 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-203ENST00000585448 PTPRAP18433 802 aa7.92□□□□□ -1.14
SMAD4-203ENST00000585448 PRPF40BQ6NWY9 871 aaKnown RBP7.92□□□□□ -1.14
SMAD4-203ENST00000585448 CCNJLQ8IV13 435 aa7.92□□□□□ -1.14
SMAD4-203ENST00000585448 DHX37Q8IY37 1157 aaKnown RBP7.92□□□□□ -1.14
SMAD4-203ENST00000585448 SMAP1Q8IYB5 467 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-203ENST00000585448 PNNQ9H307 717 aaKnown RBP7.92□□□□□ -1.14
SMAD4-203ENST00000585448 A0A0A0MRY4 1105 aa7.91□□□□□ -1.14
SMAD4-203ENST00000585448 A0A1W2PP55 124 aa7.91□□□□□ -1.14
SMAD4-203ENST00000585448 ELNP15502 786 aa7.91□□□□□ -1.14
SMAD4-203ENST00000585448 PRRT3Q5FWE3 981 aa7.91□□□□□ -1.14
SMAD4-203ENST00000585448 USPL1Q5W0Q7 1092 aa7.91□□□□□ -1.14
SMAD4-203ENST00000585448 FMR1NBQ8N0W7 255 aaPredicted RBP7.91□□□□□ -1.14
SMAD4-203ENST00000585448 WNT8BQ93098 351 aa7.91□□□□□ -1.14
SMAD4-203ENST00000585448 DCAF5Q96JK2 942 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms