RNA–Protein interactions for RNA: ENST00000569709.5

RNPS1-225, Transcript of RNA binding protein with serine rich domain 1, human

TSL 4

Gene RNPS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-225	ENST00000569709	APAF1	O14727	1248 aa		13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	DDX58	O95786	925 aa	Known RBP	13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	ATP2B4	P23634	1241 aa		13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	CTSW	P56202	376 aa		13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	SOX10	P56693	466 aa		13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	FKBP1B	P68106	108 aa		13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	ERICH6B	Q5W0A0	696 aa		13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	REM2	Q8IYK8	340 aa	Predicted RBP	13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	CDC5L	Q99459	802 aa	Known RBP	13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	SCAF8	Q9UPN6	1271 aa	Known RBP	13.7	□□□□□ -0.22
RNPS1-225	ENST00000569709	CENPF	P49454	3210 aa		13.69	□□□□□ -0.22
RNPS1-225	ENST00000569709	CCDC30	Q5VVM6	783 aa		13.69	□□□□□ -0.22
RNPS1-225	ENST00000569709	PODN	Q7Z5L7	613 aa		13.69	□□□□□ -0.22
RNPS1-225	ENST00000569709	C8orf58	Q8NAV2	365 aa		13.69	□□□□□ -0.22
RNPS1-225	ENST00000569709	MAP3K2	Q9Y2U5	619 aa		13.69	□□□□□ -0.22
RNPS1-225	ENST00000569709	MED23	Q9ULK4	1368 aa		13.69	□□□□□ -0.22
RNPS1-225	ENST00000569709	HTT	P42858	3142 aa		13.68	□□□□□ -0.22
RNPS1-225	ENST00000569709	WTIP	A6NIX2	430 aa	Predicted RBP	13.68	□□□□□ -0.22
RNPS1-225	ENST00000569709	MOB2	Q70IA6	237 aa		13.68	□□□□□ -0.22
RNPS1-225	ENST00000569709	CTU1	Q7Z7A3	348 aa	Known RBP	13.68	□□□□□ -0.22
RNPS1-225	ENST00000569709	CDCA7L	Q96GN5	454 aa		13.68	□□□□□ -0.22
RNPS1-225	ENST00000569709	MKI67	P46013	3256 aa	Known RBP	13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	IGKV5-2	P06315	115 aa		13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	NBPF9	Q3BBW0	867 aa		13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	PRAMEF18	Q5VWM3	479 aa		13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	FBXW7	Q969H0	707 aa		13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	MXD3	Q9BW11	206 aa		13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	CHMP4A	Q9BY43	222 aa		13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	GREM2	Q9H772	168 aa		13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	BSDC1	Q9NW68	430 aa	Predicted RBP	13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	MINPP1	Q9UNW1	487 aa		13.67	□□□□□ -0.22
RNPS1-225	ENST00000569709	PI4KAP2	A4QPH2	592 aa		13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	UBE2Q2L	H0YL09	131 aa		13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	CCT4	P50991	539 aa	Known RBP	13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	TTLL12	Q14166	644 aa	Predicted RBP	13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	DACT2	Q5SW24	774 aa		13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	KSR2	Q6VAB6	950 aa		13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	OGFOD1	Q8N543	542 aa		13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	PI4KAP1	Q8N8J0	262 aa		13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	TTLL11	Q8NHH1	800 aa		13.66	□□□□□ -0.22
RNPS1-225	ENST00000569709	NEXN	Q0ZGT2	675 aa		13.65	□□□□□ -0.22
RNPS1-225	ENST00000569709	TSPYL6	Q8N831	410 aa		13.65	□□□□□ -0.22
RNPS1-225	ENST00000569709	PPP4R2	Q9NY27	417 aa		13.65	□□□□□ -0.22
RNPS1-225	ENST00000569709	RCAN3	Q9UKA8	241 aa		13.65	□□□□□ -0.22
RNPS1-225	ENST00000569709	MYO3B	Q8WXR4	1341 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	WNT10B	O00744	389 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	TBC1D8	O95759	1140 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	NF2	P35240	595 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	CWF19L2	Q2TBE0	894 aa	Known RBP	13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	STRIP1	Q5VSL9	837 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	STK31	Q9BXU1	1019 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	COA1	Q9GZY4	146 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	HDAC9	Q9UKV0	1011 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	HPS5	Q9UPZ3	1129 aa		13.64	□□□□□ -0.23
RNPS1-225	ENST00000569709	BRCA2	P51587	3418 aa		13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	NEURL1B	A8MQ27	555 aa		13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	SASH1	O94885	1247 aa		13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	IGHMBP2	P38935	993 aa	Known RBP	13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	RRP1	P56182	461 aa	Known RBP	13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	MKRN3	Q13064	507 aa	Known RBP	13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	PKN2	Q16513	984 aa	Known RBP	13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	UBE3B	Q7Z3V4	1068 aa		13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	TXNRD3	Q86VQ6	643 aa		13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	TSR2	Q969E8	191 aa	Known RBP	13.63	□□□□□ -0.23
RNPS1-225	ENST00000569709	LEMD3	Q9Y2U8	911 aa		13.62	□□□□□ -0.23
RNPS1-225	ENST00000569709	ECM29	Q5VYK3	1845 aa		13.62	□□□□□ -0.23
RNPS1-225	ENST00000569709	ZNF804B	A4D1E1	1349 aa		13.62	□□□□□ -0.23
RNPS1-225	ENST00000569709	ZNF521	Q96K83	1311 aa		13.62	□□□□□ -0.23
RNPS1-225	ENST00000569709	CACNA1F	O60840	1977 aa		13.62	□□□□□ -0.23
RNPS1-225	ENST00000569709		A0A1B0GUL6	1792 aa		13.61	□□□□□ -0.23
RNPS1-225	ENST00000569709	KLRK1	P26718	216 aa		13.61	□□□□□ -0.23
RNPS1-225	ENST00000569709	TM4SF4	P48230	202 aa		13.61	□□□□□ -0.23
RNPS1-225	ENST00000569709	PRKG1	Q13976	671 aa		13.61	□□□□□ -0.23
RNPS1-225	ENST00000569709	TTLL5	Q6EMB2	1281 aa		13.61	□□□□□ -0.23
RNPS1-225	ENST00000569709	ARMC9	Q7Z3E5	817 aa		13.61	□□□□□ -0.23
RNPS1-225	ENST00000569709	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.61	□□□□□ -0.23
RNPS1-225	ENST00000569709	KIAA0825	Q8IV33	1275 aa		13.61	□□□□□ -0.23
RNPS1-225	ENST00000569709		H7C1W4	665 aa		13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	GPR25	O00155	361 aa		13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	ITGA6	P23229	1130 aa		13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	MMP14	P50281	582 aa		13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	PTPN12	Q05209	780 aa	Known RBP	13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	SREBF2	Q12772	1141 aa		13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	G2E3	Q7L622	706 aa		13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	MPHOSPH8	Q99549	860 aa		13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	ANKRD2	Q9GZV1	360 aa		13.6	□□□□□ -0.23
RNPS1-225	ENST00000569709	SLC4A2	P04920	1241 aa		13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	KCNJ4	P48050	445 aa		13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	GTF2I	P78347	998 aa		13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	GCKR	Q14397	625 aa		13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	TWISTNB	Q3B726	338 aa	Predicted RBP	13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	NOM1	Q5C9Z4	860 aa	Known RBP	13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	PRPF38B	Q5VTL8	546 aa	Known RBP	13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	PLA2G12B	Q9BX93	195 aa		13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	PCDH10	Q9P2E7	1040 aa		13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	COL1A1	P02452	1464 aa	Predicted RBP	13.59	□□□□□ -0.23
RNPS1-225	ENST00000569709	LAMB1	P07942	1786 aa		13.58	□□□□□ -0.23
RNPS1-225	ENST00000569709	ZBED3	Q96IU2	234 aa	Predicted RBP	13.58	□□□□□ -0.24
RNPS1-225	ENST00000569709	MYH16	Q9H6N6	1097 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms