RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 CWC25Q9NXE8 425 aaPredicted RBP18.42■□□□□ 0.54
IRF9-210ENST00000560542 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
IRF9-210ENST00000560542 ZNF646O15015 1829 aaPredicted RBP18.4■□□□□ 0.54
IRF9-210ENST00000560542 LDLRAD1Q5T700 205 aa18.4■□□□□ 0.54
IRF9-210ENST00000560542 PRAMEF18Q5VWM3 479 aa18.4■□□□□ 0.54
IRF9-210ENST00000560542 SPRYD7Q5W111 196 aa18.4■□□□□ 0.54
IRF9-210ENST00000560542 MYD88Q99836 296 aa18.4■□□□□ 0.54
IRF9-210ENST00000560542 CHMP4AQ9BY43 222 aa18.4■□□□□ 0.54
IRF9-210ENST00000560542 COA1Q9GZY4 146 aa18.4■□□□□ 0.54
IRF9-210ENST00000560542 BSDC1Q9NW68 430 aaPredicted RBP18.4■□□□□ 0.54
IRF9-210ENST00000560542 MANSC4A6NHS7 340 aaPredicted RBP18.39■□□□□ 0.53
IRF9-210ENST00000560542 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
IRF9-210ENST00000560542 CTSWP56202 376 aa18.39■□□□□ 0.53
IRF9-210ENST00000560542 PTPN12Q05209 780 aaKnown RBP18.39■□□□□ 0.53
IRF9-210ENST00000560542 SCAF8Q9UPN6 1271 aaKnown RBP18.39■□□□□ 0.53
IRF9-210ENST00000560542 LAMB1P07942 1786 aa18.38■□□□□ 0.53
IRF9-210ENST00000560542 RBBP6Q7Z6E9 1792 aaKnown RBP18.38■□□□□ 0.53
IRF9-210ENST00000560542 UNCXA6NJT0 531 aa18.38■□□□□ 0.53
IRF9-210ENST00000560542 ZBTB48P10074 688 aaPredicted RBP18.38■□□□□ 0.53
IRF9-210ENST00000560542 MKRN3Q13064 507 aaKnown RBP18.38■□□□□ 0.53
IRF9-210ENST00000560542 HABP4Q5JVS0 413 aaKnown RBP18.38■□□□□ 0.53
IRF9-210ENST00000560542 METTL22Q9BUU2 404 aaPredicted RBP18.38■□□□□ 0.53
IRF9-210ENST00000560542 MINPP1Q9UNW1 487 aa18.38■□□□□ 0.53
IRF9-210ENST00000560542 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
IRF9-210ENST00000560542 MAP3K11Q16584 847 aa18.37■□□□□ 0.53
IRF9-210ENST00000560542 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
IRF9-210ENST00000560542 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
IRF9-210ENST00000560542 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
IRF9-210ENST00000560542 IFNL1Q8IU54 200 aa18.36■□□□□ 0.53
IRF9-210ENST00000560542 ZBED3Q96IU2 234 aaPredicted RBP18.36■□□□□ 0.53
IRF9-210ENST00000560542 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
IRF9-210ENST00000560542 R3HDMLQ9H3Y0 253 aa18.36■□□□□ 0.53
IRF9-210ENST00000560542 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
IRF9-210ENST00000560542 TRIM17Q9Y577 477 aa18.36■□□□□ 0.53
IRF9-210ENST00000560542 PPP2R3BQ9Y5P8 575 aa18.36■□□□□ 0.53
IRF9-210ENST00000560542 SASH1O94885 1247 aa18.35■□□□□ 0.53
IRF9-210ENST00000560542 ZNF853P0CG23 659 aa18.35■□□□□ 0.53
IRF9-210ENST00000560542 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
IRF9-210ENST00000560542 OTOP1Q7RTM1 612 aa18.35■□□□□ 0.53
IRF9-210ENST00000560542 TTLL11Q8NHH1 800 aa18.35■□□□□ 0.53
IRF9-210ENST00000560542 ANGEL1Q9UNK9 670 aaKnown RBP18.35■□□□□ 0.53
IRF9-210ENST00000560542 MYH3P11055 1940 aa18.35■□□□□ 0.53
IRF9-210ENST00000560542 HTTP42858 3142 aa18.34■□□□□ 0.53
IRF9-210ENST00000560542 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
IRF9-210ENST00000560542 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
IRF9-210ENST00000560542 TTLL5Q6EMB2 1281 aa18.34■□□□□ 0.53
IRF9-210ENST00000560542 FBXW7Q969H0 707 aa18.34■□□□□ 0.53
IRF9-210ENST00000560542 ERO1AQ96HE7 468 aa18.34■□□□□ 0.53
IRF9-210ENST00000560542 MXD3Q9BW11 206 aa18.34■□□□□ 0.53
IRF9-210ENST00000560542 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
IRF9-210ENST00000560542 KIAA0100Q14667 2235 aaKnown RBP18.33■□□□□ 0.53
IRF9-210ENST00000560542 PPP1R12BO60237 982 aaPredicted RBP18.33■□□□□ 0.52
IRF9-210ENST00000560542 SLC10A4Q96EP9 437 aa18.33■□□□□ 0.52
IRF9-210ENST00000560542 GNAI1P63096 354 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 PRKG1Q13976 671 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 OTUD7BQ6GQQ9 843 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 KIAA0825Q8IV33 1275 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 MTMR14Q8NCE2 650 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 ARMC5Q96C12 935 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 ANKRD2Q9GZV1 360 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 DEFB129Q9H1M3 183 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 GREM2Q9H772 168 aa18.32■□□□□ 0.52
IRF9-210ENST00000560542 ZNF804BA4D1E1 1349 aa18.31■□□□□ 0.52
IRF9-210ENST00000560542 POTEFA5A3E0 1075 aa18.31■□□□□ 0.52
IRF9-210ENST00000560542 WTIPA6NIX2 430 aaPredicted RBP18.31■□□□□ 0.52
IRF9-210ENST00000560542 IGHMBP2P38935 993 aaKnown RBP18.31■□□□□ 0.52
IRF9-210ENST00000560542 CCDC30Q5VVM6 783 aa18.31■□□□□ 0.52
IRF9-210ENST00000560542 JARID2Q92833 1246 aaPredicted RBP18.31■□□□□ 0.52
IRF9-210ENST00000560542 WNK4Q96J92 1243 aa18.31■□□□□ 0.52
IRF9-210ENST00000560542 PTPN22Q9Y2R2 807 aa18.31■□□□□ 0.52
IRF9-210ENST00000560542 MAP3K2Q9Y2U5 619 aa18.31■□□□□ 0.52
IRF9-210ENST00000560542 MKI67P46013 3256 aaKnown RBP18.31■□□□□ 0.52
IRF9-210ENST00000560542 SPEF2Q9C093 1822 aa18.3■□□□□ 0.52
IRF9-210ENST00000560542 IGF2BP3O00425 579 aaKnown RBP eCLIP18.3■□□□□ 0.52
IRF9-210ENST00000560542 NEXNQ0ZGT2 675 aa18.3■□□□□ 0.52
IRF9-210ENST00000560542 DLGAP5Q15398 846 aa18.3■□□□□ 0.52
IRF9-210ENST00000560542 TXNRD3Q86VQ6 643 aa18.3■□□□□ 0.52
IRF9-210ENST00000560542 SSC5DA1L4H1 1573 aa18.3■□□□□ 0.52
IRF9-210ENST00000560542 ECM29Q5VYK3 1845 aa18.29■□□□□ 0.52
IRF9-210ENST00000560542 IGKV5-2P06315 115 aa18.29■□□□□ 0.52
IRF9-210ENST00000560542 SUPT20HL1Q3ZLR7 823 aa18.29■□□□□ 0.52
IRF9-210ENST00000560542 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
IRF9-210ENST00000560542 MYO1BO43795 1136 aa18.28■□□□□ 0.52
IRF9-210ENST00000560542 GTF2IP78347 998 aa18.28■□□□□ 0.52
IRF9-210ENST00000560542 ADAMTS8Q9UP79 889 aa18.28■□□□□ 0.52
IRF9-210ENST00000560542 TESPA1A2RU30 521 aaPredicted RBP18.27■□□□□ 0.52
IRF9-210ENST00000560542 IREB2P48200 963 aaKnown RBP18.27■□□□□ 0.52
IRF9-210ENST00000560542 CRHR2Q13324 411 aa18.27■□□□□ 0.52
IRF9-210ENST00000560542 PLA2G12BQ9BX93 195 aa18.27■□□□□ 0.52
IRF9-210ENST00000560542 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
IRF9-210ENST00000560542 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
IRF9-210ENST00000560542 ELL2O00472 640 aaPredicted RBP18.26■□□□□ 0.51
IRF9-210ENST00000560542 FXR1P51114 621 aaKnown RBP eCLIP18.26■□□□□ 0.51
IRF9-210ENST00000560542 FKBP1AP62942 108 aaKnown RBP18.26■□□□□ 0.51
IRF9-210ENST00000560542 SP3Q02447 781 aa18.26■□□□□ 0.51
IRF9-210ENST00000560542 ARHGEF6Q15052 776 aa18.26■□□□□ 0.51
IRF9-210ENST00000560542 C15orf52Q6ZUT6 534 aaKnown RBP18.26■□□□□ 0.51
IRF9-210ENST00000560542 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
IRF9-210ENST00000560542 CLMNQ96JQ2 1002 aa18.26■□□□□ 0.51
IRF9-210ENST00000560542 MPHOSPH8Q99549 860 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms