RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 CYLDQ9NQC7 956 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 CD2APQ9Y5K6 639 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 C5P01031 1676 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 RTL1A6NKG5 1358 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 MAP2P11137 1827 aaKnown RBP7.43□□□□□ -1.22
SNHG1-207ENST00000537965 TATP17735 454 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-207ENST00000537965 SMARCC1Q92922 1105 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-207ENST00000537965 DNMT3LQ9UJW3 386 aa7.42□□□□□ -1.22
SNHG1-207ENST00000537965 MAP3K19Q56UN5 1328 aa7.42□□□□□ -1.22
SNHG1-207ENST00000537965 NSD3Q9BZ95 1437 aa7.42□□□□□ -1.22
SNHG1-207ENST00000537965 UBR3Q6ZT12 1888 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 PTGIRP43119 386 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 KCNQ4P56696 695 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 CDCA8Q53HL2 280 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 CC2D2BQ6DHV5 1058 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 COL23A1Q86Y22 540 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-207ENST00000537965 NLGN2Q8NFZ4 835 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-207ENST00000537965 PCDHB11Q9Y5F2 797 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 PCDH11XQ9BZA7 1347 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 PCDH11YQ9BZA8 1340 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 TONSLQ96HA7 1378 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 KIF20BQ96Q89 1820 aa7.41□□□□□ -1.22
SNHG1-207ENST00000537965 CTSOP43234 321 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-207ENST00000537965 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.4□□□□□ -1.22
SNHG1-207ENST00000537965 PHTF2Q8N3S3 785 aa7.4□□□□□ -1.22
SNHG1-207ENST00000537965 INSM2Q96T92 566 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-207ENST00000537965 NSD2O96028 1365 aa7.4□□□□□ -1.22
SNHG1-207ENST00000537965 KIF24Q5T7B8 1368 aa7.4□□□□□ -1.22
SNHG1-207ENST00000537965 ST20-MTHFSA0A0A6YYL1 179 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 FIGNL2A6NMB9 653 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 ATP5J2-PTCD1G3V325 749 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 YBX3P16989 372 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNHG1-207ENST00000537965 SOX11P35716 441 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 SCTRP47872 440 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 TMF1P82094 1093 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 NBPF6Q5VWK0 638 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 POM121Q96HA1 1249 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 NBPF4Q96M43 638 aa7.39□□□□□ -1.23
SNHG1-207ENST00000537965 CCDC85AQ96PX6 553 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-207ENST00000537965 C4BP0C0L5 1744 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 MEGF6O75095 1541 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 INSRP06213 1382 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 PALLDQ8WX93 1383 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 H3BM21 787 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 FYB1O15117 783 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 RAD21O60216 631 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 TRAK2O60296 914 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 MSL1Q68DK7 614 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 MPRIPQ6WCQ1 1025 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 TESK2Q96S53 571 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 POLMQ9NP87 494 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-207ENST00000537965 SPG7Q9UQ90 795 aa7.38□□□□□ -1.23
SNHG1-207ENST00000537965 ATP10DQ9P241 1426 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 FLT4P35916 1363 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 HSPA6P17066 643 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 SSFA2P28290 1259 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 VEGFBP49765 207 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 SEMA3FQ13275 785 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 RRS1Q15050 365 aaKnown RBP7.37□□□□□ -1.23
SNHG1-207ENST00000537965 SLFNL1Q499Z3 407 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 CYP2U1Q7Z449 544 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 WWC1Q8IX03 1113 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 RNF217Q8TC41 542 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 OSBPL3Q9H4L5 887 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 PKD1L3Q7Z443 1732 aa7.37□□□□□ -1.23
SNHG1-207ENST00000537965 KIF13BQ9NQT8 1826 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 A0A1W2PRU2 124 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 FBLN1P23142 703 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 TSGA10IPQ3SY00 556 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 HSP90AB2PQ58FF8 381 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 FOXD4L5Q5VV16 416 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-207ENST00000537965 RNF135Q8IUD6 432 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 USHBP1Q8N6Y0 703 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 IRF7Q92985 503 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 GGNBP2Q9H3C7 697 aa7.36□□□□□ -1.23
SNHG1-207ENST00000537965 IGSF1Q8N6C5 1336 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 LOC102724428A0A0B4J2F2 783 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 CYP27B1O15528 508 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 WIPF1O43516 503 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 PPFIA3O75145 1194 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 RNF144AP50876 292 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-207ENST00000537965 SIK1P57059 783 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 PTSQ03393 145 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 TMOD3Q9NYL9 352 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 DOLKQ9UPQ8 538 aa7.35□□□□□ -1.23
SNHG1-207ENST00000537965 ARFGEF1Q9Y6D6 1849 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 N4BP2Q86UW6 1770 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-207ENST00000537965 MYCP01106 439 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-207ENST00000537965 GPC1P35052 558 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 TGFB2P61812 414 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 USP4Q13107 963 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 IFNL2Q8IZJ0 200 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 NLGN1Q8N2Q7 840 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 PIGBQ92521 554 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 ALG2Q9H553 416 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 TOGARAM1Q9Y4F4 1720 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 ZNF831Q5JPB2 1677 aa7.34□□□□□ -1.23
SNHG1-207ENST00000537965 ADCY9O60503 1353 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms