RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 ZNF587Q96SQ5 575 aaPredicted RBP11.57□□□□□ -0.56
LMO3-212ENST00000535535 DMGDHQ9UI17 866 aaKnown RBP11.57□□□□□ -0.56
LMO3-212ENST00000535535 MED14O60244 1454 aa11.57□□□□□ -0.56
LMO3-212ENST00000535535 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
LMO3-212ENST00000535535 BHMTQ93088 406 aa11.57□□□□□ -0.56
LMO3-212ENST00000535535 MBD5Q9P267 1494 aa11.56□□□□□ -0.56
LMO3-212ENST00000535535 TNRQ92752 1358 aa11.56□□□□□ -0.56
LMO3-212ENST00000535535 SPATA31C1P0DKV0 1188 aa11.56□□□□□ -0.56
LMO3-212ENST00000535535 WEE1P30291 646 aa11.56□□□□□ -0.56
LMO3-212ENST00000535535 MICALL1Q8N3F8 863 aa11.56□□□□□ -0.56
LMO3-212ENST00000535535 PODXL2Q9NZ53 605 aa11.56□□□□□ -0.56
LMO3-212ENST00000535535 CFDP1Q9UEE9 299 aaPredicted RBP11.56□□□□□ -0.56
LMO3-212ENST00000535535 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
LMO3-212ENST00000535535 UGGT1Q9NYU2 1555 aa11.55□□□□□ -0.56
LMO3-212ENST00000535535 CCNB3Q8WWL7 1395 aa11.55□□□□□ -0.56
LMO3-212ENST00000535535 C8orf86Q6ZUL3 223 aa11.55□□□□□ -0.56
LMO3-212ENST00000535535 RTEL1-TNFRSF6BF6WH68 1400 aa11.55□□□□□ -0.56
LMO3-212ENST00000535535 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
LMO3-212ENST00000535535 NLRP1Q9C000 1473 aa11.54□□□□□ -0.56
LMO3-212ENST00000535535 K7ELQ4 463 aaPredicted RBP11.54□□□□□ -0.56
LMO3-212ENST00000535535 GRNP28799 593 aaKnown RBP11.54□□□□□ -0.56
LMO3-212ENST00000535535 C20orf204Q6ZNR8 217 aa11.54□□□□□ -0.56
LMO3-212ENST00000535535 QTRT2Q9H974 415 aaKnown RBP11.54□□□□□ -0.56
LMO3-212ENST00000535535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.53□□□□□ -0.56
LMO3-212ENST00000535535 NPHP4O75161 1426 aaPredicted RBP11.53□□□□□ -0.56
LMO3-212ENST00000535535 FOXO3O43524 673 aa11.53□□□□□ -0.56
LMO3-212ENST00000535535 NID1P14543 1247 aa11.53□□□□□ -0.56
LMO3-212ENST00000535535 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
LMO3-212ENST00000535535 LRRC7Q96NW7 1537 aa11.53□□□□□ -0.56
LMO3-212ENST00000535535 DHX29Q7Z478 1369 aaKnown RBP11.53□□□□□ -0.56
LMO3-212ENST00000535535 GSX2Q9BZM3 304 aa11.52□□□□□ -0.56
LMO3-212ENST00000535535 KLK14Q9P0G3 267 aa11.52□□□□□ -0.56
LMO3-212ENST00000535535 SPDYE3A6NKU9 549 aa11.51□□□□□ -0.57
LMO3-212ENST00000535535 FURINP09958 794 aa11.51□□□□□ -0.57
LMO3-212ENST00000535535 ANKLE2Q86XL3 938 aa11.51□□□□□ -0.57
LMO3-212ENST00000535535 EHBP1L1Q8N3D4 1523 aa11.51□□□□□ -0.57
LMO3-212ENST00000535535 UBE2OQ9C0C9 1292 aaKnown RBP11.51□□□□□ -0.57
LMO3-212ENST00000535535 SLC6A14Q9UN76 642 aa11.51□□□□□ -0.57
LMO3-212ENST00000535535 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
LMO3-212ENST00000535535 MIA2Q96PC5 1412 aa11.5□□□□□ -0.57
LMO3-212ENST00000535535 UBR1Q8IWV7 1749 aa11.5□□□□□ -0.57
LMO3-212ENST00000535535 INPP5BP32019 993 aa11.5□□□□□ -0.57
LMO3-212ENST00000535535 FAM200AQ8TCP9 573 aa11.5□□□□□ -0.57
LMO3-212ENST00000535535 MYO19Q96H55 970 aa11.5□□□□□ -0.57
LMO3-212ENST00000535535 CCDC141Q6ZP82 1450 aa11.49□□□□□ -0.57
LMO3-212ENST00000535535 CFAP65Q6ZU64 1925 aaKnown RBP11.49□□□□□ -0.57
LMO3-212ENST00000535535 IDH3AP50213 366 aa11.49□□□□□ -0.57
LMO3-212ENST00000535535 DGKZQ13574 1117 aa11.49□□□□□ -0.57
LMO3-212ENST00000535535 PRRT3Q5FWE3 981 aa11.49□□□□□ -0.57
LMO3-212ENST00000535535 THEMISQ8N1K5 641 aaPredicted RBP11.49□□□□□ -0.57
LMO3-212ENST00000535535 UBE2Q2Q8WVN8 375 aa11.49□□□□□ -0.57
LMO3-212ENST00000535535 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
LMO3-212ENST00000535535 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
LMO3-212ENST00000535535 TBC1D8BQ0IIM8 1120 aa11.48□□□□□ -0.57
LMO3-212ENST00000535535 CCINQ13939 588 aa11.48□□□□□ -0.57
LMO3-212ENST00000535535 CDCA8Q53HL2 280 aa11.48□□□□□ -0.57
LMO3-212ENST00000535535 NAGPAQ9UK23 515 aa11.48□□□□□ -0.57
LMO3-212ENST00000535535 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
LMO3-212ENST00000535535 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
LMO3-212ENST00000535535 KIF3BO15066 747 aa11.47□□□□□ -0.57
LMO3-212ENST00000535535 NFKB1P19838 968 aa11.47□□□□□ -0.57
LMO3-212ENST00000535535 DNAJB12Q9NXW2 375 aaKnown RBP11.47□□□□□ -0.57
LMO3-212ENST00000535535 CEP152O94986 1710 aa11.47□□□□□ -0.57
LMO3-212ENST00000535535 ABCC3O15438 1527 aa11.46□□□□□ -0.57
LMO3-212ENST00000535535 EPB42P16452 691 aa11.46□□□□□ -0.57
LMO3-212ENST00000535535 CAMSAP2Q08AD1 1489 aa11.46□□□□□ -0.57
LMO3-212ENST00000535535 ARHGEF5Q12774 1597 aa11.46□□□□□ -0.57
LMO3-212ENST00000535535 CEP162Q5TB80 1403 aa11.46□□□□□ -0.57
LMO3-212ENST00000535535 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.57
LMO3-212ENST00000535535 RGS17Q9UGC6 210 aaPredicted RBP11.46□□□□□ -0.57
LMO3-212ENST00000535535 WASHC2CQ9Y4E1 1318 aa11.46□□□□□ -0.57
LMO3-212ENST00000535535 LILRB5O75023 590 aa11.45□□□□□ -0.58
LMO3-212ENST00000535535 RFX1P22670 979 aa11.45□□□□□ -0.58
LMO3-212ENST00000535535 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
LMO3-212ENST00000535535 ZMIZ1Q9ULJ6 1067 aa11.45□□□□□ -0.58
LMO3-212ENST00000535535 MROH1Q8NDA8 1641 aa11.45□□□□□ -0.58
LMO3-212ENST00000535535 ARSDP51689 593 aa11.44□□□□□ -0.58
LMO3-212ENST00000535535 VTI1AQ96AJ9 217 aa11.44□□□□□ -0.58
LMO3-212ENST00000535535 IGFLR1Q9H665 355 aa11.44□□□□□ -0.58
LMO3-212ENST00000535535 SETD1AO15047 1707 aaKnown RBP11.44□□□□□ -0.58
LMO3-212ENST00000535535 ERVK-7P63135 1459 aa11.44□□□□□ -0.58
LMO3-212ENST00000535535 CENPBP07199 599 aaPredicted RBP11.44□□□□□ -0.58
LMO3-212ENST00000535535 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
LMO3-212ENST00000535535 SWI5Q1ZZU3 235 aa11.44□□□□□ -0.58
LMO3-212ENST00000535535 C11orf91Q3C1V1 193 aa11.44□□□□□ -0.58
LMO3-212ENST00000535535 LRFN2Q9ULH4 789 aa11.44□□□□□ -0.58
LMO3-212ENST00000535535 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
LMO3-212ENST00000535535 GATA4P43694 442 aa11.43□□□□□ -0.58
LMO3-212ENST00000535535 ELOAQ14241 798 aaKnown RBP11.43□□□□□ -0.58
LMO3-212ENST00000535535 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
LMO3-212ENST00000535535 SCAF11Q99590 1463 aaKnown RBP11.42□□□□□ -0.58
LMO3-212ENST00000535535 MAST1Q9Y2H9 1570 aa11.42□□□□□ -0.58
LMO3-212ENST00000535535 MICAL2O94851 1124 aa11.42□□□□□ -0.58
LMO3-212ENST00000535535 MAP3K6O95382 1288 aa11.42□□□□□ -0.58
LMO3-212ENST00000535535 TRIM28Q13263 835 aaKnown RBP11.42□□□□□ -0.58
LMO3-212ENST00000535535 DOC2BQ14184 412 aa11.42□□□□□ -0.58
LMO3-212ENST00000535535 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
LMO3-212ENST00000535535 C11orf16Q9NQ32 467 aa11.42□□□□□ -0.58
LMO3-212ENST00000535535 ZFATQ9P243 1243 aa11.42□□□□□ -0.58
LMO3-212ENST00000535535 SLIT1O75093 1534 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms