RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 HMG20BQ9P0W2 317 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 PLS1Q14651 629 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 TNIP1Q15025 636 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 ERFEQ4G0M1 354 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 KDRP35968 1356 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 GYG1P46976 350 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 WDR66Q8TBY9 1149 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 ARMT1Q9H993 441 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 AATFQ9NY61 560 aaKnown RBP eCLIP18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.53
PPFIA1-222ENST00000532504 SH2B1Q9NRF2 756 aaPredicted RBP18.33■□□□□ 0.53
PPFIA1-222ENST00000532504 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
PPFIA1-222ENST00000532504 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.52
PPFIA1-222ENST00000532504 CCDC129Q6ZRS4 1044 aa18.33■□□□□ 0.52
PPFIA1-222ENST00000532504 GNAT2P19087 354 aa18.33■□□□□ 0.52
PPFIA1-222ENST00000532504 RAB3GAP1Q15042 981 aa18.33■□□□□ 0.52
PPFIA1-222ENST00000532504 CPSF1Q10570 1443 aaKnown RBP18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 IPO7O95373 1038 aaKnown RBP18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 VPS72Q15906 364 aa18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 MADDQ8WXG6 1647 aa18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 PTPRUQ92729 1446 aa18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 SCLT1Q96NL6 688 aa18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 CNNM2Q9H8M5 875 aa18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 BMP2KQ9NSY1 1161 aaPredicted RBP18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 ORC3Q9UBD5 711 aaPredicted RBP18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 CFAP45Q9UL16 551 aa18.32■□□□□ 0.52
PPFIA1-222ENST00000532504 PSDA5PKW4 1024 aaPredicted RBP18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 MFSD14BQ5SR56 506 aa18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 CRB1P82279 1406 aa18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 ZAP70P43403 619 aa18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 BRPF1P55201 1214 aaPredicted RBP18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 NFKBIBQ15653 356 aa18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 NAT10Q9H0A0 1025 aaKnown RBP18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 TXNRD1Q16881 649 aa18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 SPATA5Q8NB90 893 aa18.31■□□□□ 0.52
PPFIA1-222ENST00000532504 DLGAP5Q15398 846 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 NECAB1Q8N987 351 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 SEC31BQ9NQW1 1179 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 ZBTB43O43298 467 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 DPY19L2Q6NUT2 758 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 KIAA0825Q8IV33 1275 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 H7C1D1 291 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 CHRNDQ07001 517 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 TTF2Q9UNY4 1162 aaKnown RBP18.3■□□□□ 0.52
PPFIA1-222ENST00000532504 BCAMP50895 628 aa18.29■□□□□ 0.52
PPFIA1-222ENST00000532504 SMIM5Q71RC9 77 aa18.29■□□□□ 0.52
PPFIA1-222ENST00000532504 TRPM1Q7Z4N2 1603 aa18.29■□□□□ 0.52
PPFIA1-222ENST00000532504 MATR3P43243 847 aaKnown RBP eCLIP18.29■□□□□ 0.522e-7■■■□□ 18.4
PPFIA1-222ENST00000532504 HMGN5P82970 282 aaKnown RBP18.29■□□□□ 0.52
PPFIA1-222ENST00000532504 ZNF526Q8TF50 670 aaPredicted RBP18.29■□□□□ 0.52
PPFIA1-222ENST00000532504 PRC1O43663 620 aa18.29■□□□□ 0.52
PPFIA1-222ENST00000532504 RPS6KA4O75676 772 aa18.29■□□□□ 0.52
PPFIA1-222ENST00000532504 PPEF1O14829 653 aaPredicted RBP18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 PRDM1O75626 825 aa18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 OFD1O75665 1012 aa18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 MBD3O95983 291 aa18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 SCNN1DP51172 638 aa18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 ZYXQ15942 572 aaKnown RBP18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 PUS3Q9BZE2 481 aaKnown RBP18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 MAST3O60307 1309 aa18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 CCDC171Q6TFL3 1326 aa18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 CEP131Q9UPN4 1083 aa18.28■□□□□ 0.52
PPFIA1-222ENST00000532504 MAPKAPK5Q8IW41 473 aa18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 CCDC12Q8WUD4 166 aaPredicted RBP18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 NLRP10Q86W26 655 aa18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 PDILTQ8N807 584 aa18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 ATP2B4P23634 1241 aa18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 TTLL5Q6EMB2 1281 aa18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 Q6ZUG5 572 aa18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 HEATR3Q7Z4Q2 680 aa18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 EHMT1Q9H9B1 1298 aa18.27■□□□□ 0.52
PPFIA1-222ENST00000532504 TRAK2O60296 914 aa18.27■□□□□ 0.51
PPFIA1-222ENST00000532504 RTN1Q16799 776 aa18.27■□□□□ 0.51
PPFIA1-222ENST00000532504 HLFQ16534 295 aa18.26■□□□□ 0.51
PPFIA1-222ENST00000532504 PICK1Q9NRD5 415 aa18.26■□□□□ 0.51
PPFIA1-222ENST00000532504 MAGEC2Q9UBF1 373 aaPredicted RBP18.26■□□□□ 0.51
PPFIA1-222ENST00000532504 CCDC178Q5BJE1 867 aa18.26■□□□□ 0.51
PPFIA1-222ENST00000532504 PRM3Q9NNZ6 103 aa18.26■□□□□ 0.51
PPFIA1-222ENST00000532504 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
PPFIA1-222ENST00000532504 TNMDQ9H2S6 317 aa18.26■□□□□ 0.51
PPFIA1-222ENST00000532504 SPATA31A1Q5TZJ5 1347 aa18.26■□□□□ 0.51
PPFIA1-222ENST00000532504 RXRAP19793 462 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 GJB2P29033 226 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 CEP57L1Q8IYX8 460 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 SAMM50Q9Y512 469 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 OVOS2A0A0G2JMS6 1433 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 OVOS2A0A0J9YW53 1432 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 OVOS2Q6IE36 1432 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 CHMLP26374 656 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 TMTC2Q8N394 836 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 SUSD4Q5VX71 490 aa18.25■□□□□ 0.51
PPFIA1-222ENST00000532504 TBC1D22AQ8WUA7 517 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms