RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 HPS5Q9UPZ3 1129 aa27.19■■□□□ 1.94
CHKA-206ENST00000531341 TXNRD3Q86VQ6 643 aa27.18■■□□□ 1.94
CHKA-206ENST00000531341 ZNF296Q8WUU4 475 aaPredicted RBP27.18■■□□□ 1.94
CHKA-206ENST00000531341 PI4KAP2A4QPH2 592 aa27.16■■□□□ 1.94
CHKA-206ENST00000531341 WNT10BO00744 389 aa27.16■■□□□ 1.94
CHKA-206ENST00000531341 MKRN3Q13064 507 aaKnown RBP27.16■■□□□ 1.94
CHKA-206ENST00000531341 PI4KAP1Q8N8J0 262 aa27.16■■□□□ 1.94
CHKA-206ENST00000531341 FBXW7Q969H0 707 aa27.16■■□□□ 1.94
CHKA-206ENST00000531341 CDC5LQ99459 802 aaKnown RBP27.16■■□□□ 1.94
CHKA-206ENST00000531341 BSDC1Q9NW68 430 aaPredicted RBP27.16■■□□□ 1.94
CHKA-206ENST00000531341 MED23Q9ULK4 1368 aa27.16■■□□□ 1.94
CHKA-206ENST00000531341 DDX58O95786 925 aaKnown RBP27.15■■□□□ 1.94
CHKA-206ENST00000531341 CCT4P50991 539 aaKnown RBP27.15■■□□□ 1.94
CHKA-206ENST00000531341 TM4SF4P48230 202 aa27.14■■□□□ 1.94
CHKA-206ENST00000531341 TTLL12Q14166 644 aaPredicted RBP27.14■■□□□ 1.94
CHKA-206ENST00000531341 CWF19L2Q2TBE0 894 aaKnown RBP27.14■■□□□ 1.94
CHKA-206ENST00000531341 CCDC30Q5VVM6 783 aa27.14■■□□□ 1.94
CHKA-206ENST00000531341 KSR2Q6VAB6 950 aa27.14■■□□□ 1.94
CHKA-206ENST00000531341 ZNF646O15015 1829 aaPredicted RBP27.13■■□□□ 1.93
CHKA-206ENST00000531341 SASH1O94885 1247 aa27.13■■□□□ 1.93
CHKA-206ENST00000531341 KLRK1P26718 216 aa27.13■■□□□ 1.93
CHKA-206ENST00000531341 HDAC9Q9UKV0 1011 aa27.13■■□□□ 1.93
CHKA-206ENST00000531341 PDE4DIPQ5VU43 2346 aa27.12■■□□□ 1.93
CHKA-206ENST00000531341 PRKG1Q13976 671 aa27.12■■□□□ 1.93
CHKA-206ENST00000531341 STRIP1Q5VSL9 837 aa27.12■■□□□ 1.93
CHKA-206ENST00000531341 R3HDMLQ9H3Y0 253 aa27.12■■□□□ 1.93
CHKA-206ENST00000531341 HTTP42858 3142 aa27.12■■□□□ 1.93
CHKA-206ENST00000531341 PTPN12Q05209 780 aaKnown RBP27.11■■□□□ 1.93
CHKA-206ENST00000531341 OGFOD1Q8N543 542 aa27.11■■□□□ 1.93
CHKA-206ENST00000531341 COA1Q9GZY4 146 aa27.11■■□□□ 1.93
CHKA-206ENST00000531341 FZD1Q9UP38 647 aa27.11■■□□□ 1.93
CHKA-206ENST00000531341 GPR25O00155 361 aa27.1■■□□□ 1.93
CHKA-206ENST00000531341 CALD1Q05682 793 aaKnown RBP27.1■■□□□ 1.93
CHKA-206ENST00000531341 G2E3Q7L622 706 aa27.1■■□□□ 1.93
CHKA-206ENST00000531341 PRKRIP1Q9H875 184 aaPredicted RBP27.1■■□□□ 1.93
CHKA-206ENST00000531341 PCDH10Q9P2E7 1040 aa27.1■■□□□ 1.93
CHKA-206ENST00000531341 MKI67P46013 3256 aaKnown RBP27.1■■□□□ 1.93
CHKA-206ENST00000531341 SPEF2Q9C093 1822 aa27.09■■□□□ 1.93
CHKA-206ENST00000531341 NEURL1BA8MQ27 555 aa27.09■■□□□ 1.93
CHKA-206ENST00000531341 TSR2Q969E8 191 aaKnown RBP27.09■■□□□ 1.93
CHKA-206ENST00000531341 CENPFP49454 3210 aa27.09■■□□□ 1.93
CHKA-206ENST00000531341 H7C1W4 665 aa27.08■■□□□ 1.93
CHKA-206ENST00000531341 PKN2Q16513 984 aaKnown RBP27.08■■□□□ 1.93
CHKA-206ENST00000531341 TTLL5Q6EMB2 1281 aa27.08■■□□□ 1.93
CHKA-206ENST00000531341 KIAA0825Q8IV33 1275 aa27.07■■□□□ 1.92
CHKA-206ENST00000531341 LEMD3Q9Y2U8 911 aa27.07■■□□□ 1.92
CHKA-206ENST00000531341 MYO3BQ8WXR4 1341 aa27.07■■□□□ 1.92
CHKA-206ENST00000531341 UBE3BQ7Z3V4 1068 aa27.06■■□□□ 1.92
CHKA-206ENST00000531341 ZBED3Q96IU2 234 aaPredicted RBP27.06■■□□□ 1.92
CHKA-206ENST00000531341 ZNF804BA4D1E1 1349 aa27.06■■□□□ 1.92
CHKA-206ENST00000531341 NF2P35240 595 aa27.05■■□□□ 1.92
CHKA-206ENST00000531341 GTF2IP78347 998 aa27.05■■□□□ 1.92
CHKA-206ENST00000531341 PRPF38BQ5VTL8 546 aaKnown RBP27.05■■□□□ 1.92
CHKA-206ENST00000531341 SNAP23O00161 211 aa27.04■■□□□ 1.92
CHKA-206ENST00000531341 ITGA6P23229 1130 aa27.04■■□□□ 1.92
CHKA-206ENST00000531341 IGHMBP2P38935 993 aaKnown RBP27.04■■□□□ 1.92
CHKA-206ENST00000531341 NEXNQ0ZGT2 675 aa27.04■■□□□ 1.92
CHKA-206ENST00000531341 LDLRAD1Q5T700 205 aa27.04■■□□□ 1.92
CHKA-206ENST00000531341 PCDHAC2Q9Y5I4 1007 aa27.04■■□□□ 1.92
CHKA-206ENST00000531341 CASP7P55210 303 aa27.03■■□□□ 1.92
CHKA-206ENST00000531341 NOM1Q5C9Z4 860 aaKnown RBP27.03■■□□□ 1.92
CHKA-206ENST00000531341 SREBF2Q12772 1141 aa27.02■■□□□ 1.92
CHKA-206ENST00000531341 SPRYD7Q5W111 196 aa27.02■■□□□ 1.92
CHKA-206ENST00000531341 FBXO46Q6PJ61 603 aaPredicted RBP27.02■■□□□ 1.92
CHKA-206ENST00000531341 ARMC9Q7Z3E5 817 aa27.02■■□□□ 1.92
CHKA-206ENST00000531341 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.02■■□□□ 1.92
CHKA-206ENST00000531341 ANGEL1Q9UNK9 670 aaKnown RBP27.02■■□□□ 1.92
CHKA-206ENST00000531341 MYH3P11055 1940 aa27.01■■□□□ 1.91
CHKA-206ENST00000531341 GCKRQ14397 625 aa27.01■■□□□ 1.91
CHKA-206ENST00000531341 APOBEC3FQ8IUX4 373 aaKnown RBP27.01■■□□□ 1.91
CHKA-206ENST00000531341 CERS5Q8N5B7 392 aa27.01■■□□□ 1.91
CHKA-206ENST00000531341 PLA2G12BQ9BX93 195 aa27.01■■□□□ 1.91
CHKA-206ENST00000531341 CFHR5Q9BXR6 569 aa27.01■■□□□ 1.91
CHKA-206ENST00000531341 CHMP4AQ9BY43 222 aa27.01■■□□□ 1.91
CHKA-206ENST00000531341 BRCA2P51587 3418 aa27■■□□□ 1.91
CHKA-206ENST00000531341 FKTNO75072 461 aa27■■□□□ 1.91
CHKA-206ENST00000531341 SLC4A2P04920 1241 aa27■■□□□ 1.91
CHKA-206ENST00000531341 CSF1RP07333 972 aa27■■□□□ 1.91
CHKA-206ENST00000531341 STK31Q9BXU1 1019 aa27■■□□□ 1.91
CHKA-206ENST00000531341 ANKRD2Q9GZV1 360 aa27■■□□□ 1.91
CHKA-206ENST00000531341 CD209Q9NNX6 404 aa27■■□□□ 1.91
CHKA-206ENST00000531341 IRS2Q9Y4H2 1338 aa26.99■■□□□ 1.91
CHKA-206ENST00000531341 CHRNDQ07001 517 aa26.99■■□□□ 1.91
CHKA-206ENST00000531341 MPHOSPH8Q99549 860 aa26.99■■□□□ 1.91
CHKA-206ENST00000531341 DEFB129Q9H1M3 183 aa26.99■■□□□ 1.91
CHKA-206ENST00000531341 MMP14P50281 582 aa26.98■■□□□ 1.91
CHKA-206ENST00000531341 TWISTNBQ3B726 338 aaPredicted RBP26.98■■□□□ 1.91
CHKA-206ENST00000531341 CLMNQ96JQ2 1002 aa26.98■■□□□ 1.91
CHKA-206ENST00000531341 AOX1Q06278 1338 aa26.97■■□□□ 1.91
CHKA-206ENST00000531341 TAF5LO75529 589 aa26.97■■□□□ 1.91
CHKA-206ENST00000531341 HELBQ8NG08 1087 aaPredicted RBP26.97■■□□□ 1.91
CHKA-206ENST00000531341 SSC5DA1L4H1 1573 aa26.97■■□□□ 1.91
CHKA-206ENST00000531341 KCNJ4P48050 445 aa26.95■■□□□ 1.9
CHKA-206ENST00000531341 DLGAP5Q15398 846 aa26.95■■□□□ 1.9
CHKA-206ENST00000531341 CCDC184Q52MB2 194 aa26.95■■□□□ 1.9
CHKA-206ENST00000531341 SLC10A4Q96EP9 437 aa26.95■■□□□ 1.9
CHKA-206ENST00000531341 F8W031 263 aaPredicted RBP26.94■■□□□ 1.9
CHKA-206ENST00000531341 FLIIQ13045 1269 aa26.94■■□□□ 1.9
CHKA-206ENST00000531341 MAP3K11Q16584 847 aa26.94■■□□□ 1.9
CHKA-206ENST00000531341 IFNL1Q8IU54 200 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms