RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 RFX1P22670 979 aa11.27□□□□□ -0.61
CHKA-205ENST00000530730 ILDR2Q71H61 639 aa11.27□□□□□ -0.61
CHKA-205ENST00000530730 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
CHKA-205ENST00000530730 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.61
CHKA-205ENST00000530730 MAP3K6O95382 1288 aa11.26□□□□□ -0.61
CHKA-205ENST00000530730 GRNP28799 593 aaKnown RBP11.26□□□□□ -0.61
CHKA-205ENST00000530730 IDH3AP50213 366 aa11.26□□□□□ -0.61
CHKA-205ENST00000530730 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
CHKA-205ENST00000530730 VTI1AQ96AJ9 217 aa11.26□□□□□ -0.61
CHKA-205ENST00000530730 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
CHKA-205ENST00000530730 KLK14Q9P0G3 267 aa11.26□□□□□ -0.61
CHKA-205ENST00000530730 SLC6A14Q9UN76 642 aa11.26□□□□□ -0.61
CHKA-205ENST00000530730 NOVA2Q9UNW9 492 aaKnown RBP11.26□□□□□ -0.61
CHKA-205ENST00000530730 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
CHKA-205ENST00000530730 NCOA2Q15596 1464 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 LILRB5O75023 590 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 ARSDP51689 593 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 DGKZQ13574 1117 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 PCSK7Q16549 785 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 PNMA5Q96PV4 448 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 WASHC2CQ9Y4E1 1318 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
CHKA-205ENST00000530730 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
CHKA-205ENST00000530730 UBAP1LF5GYI3 381 aa11.24□□□□□ -0.61
CHKA-205ENST00000530730 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
CHKA-205ENST00000530730 ADGBQ8N7X0 1667 aa11.24□□□□□ -0.61
CHKA-205ENST00000530730 DNAJB12Q9NXW2 375 aaKnown RBP11.23□□□□□ -0.61
CHKA-205ENST00000530730 CCDC141Q6ZP82 1450 aa11.23□□□□□ -0.61
CHKA-205ENST00000530730 CEP170BQ9Y4F5 1589 aaPredicted RBP11.23□□□□□ -0.61
CHKA-205ENST00000530730 A2ML1A8K2U0 1454 aa11.22□□□□□ -0.61
CHKA-205ENST00000530730 MICAL2O94851 1124 aa11.22□□□□□ -0.61
CHKA-205ENST00000530730 NFKB1P19838 968 aa11.22□□□□□ -0.61
CHKA-205ENST00000530730 CAMSAP2Q08AD1 1489 aa11.22□□□□□ -0.61
CHKA-205ENST00000530730 C8orf86Q6ZUL3 223 aa11.22□□□□□ -0.61
CHKA-205ENST00000530730 TNRQ92752 1358 aa11.22□□□□□ -0.61
CHKA-205ENST00000530730 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
CHKA-205ENST00000530730 ZMIZ1Q9ULJ6 1067 aa11.22□□□□□ -0.61
CHKA-205ENST00000530730 MYO3AQ8NEV4 1616 aa11.21□□□□□ -0.61
CHKA-205ENST00000530730 GATA4P43694 442 aa11.21□□□□□ -0.61
CHKA-205ENST00000530730 TRIM28Q13263 835 aaKnown RBP11.21□□□□□ -0.61
CHKA-205ENST00000530730 COL26A1Q96A83 441 aa11.21□□□□□ -0.61
CHKA-205ENST00000530730 APBA3O96018 575 aa11.2□□□□□ -0.62
CHKA-205ENST00000530730 EGFRP00533 1210 aa11.2□□□□□ -0.62
CHKA-205ENST00000530730 FURINP09958 794 aa11.2□□□□□ -0.62
CHKA-205ENST00000530730 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
CHKA-205ENST00000530730 OCLNQ16625 522 aa11.2□□□□□ -0.62
CHKA-205ENST00000530730 CDCA8Q53HL2 280 aa11.2□□□□□ -0.62
CHKA-205ENST00000530730 ANKLE2Q86XL3 938 aa11.2□□□□□ -0.62
CHKA-205ENST00000530730 THEMISQ8N1K5 641 aaPredicted RBP11.2□□□□□ -0.62
CHKA-205ENST00000530730 LRFN2Q9ULH4 789 aa11.2□□□□□ -0.62
CHKA-205ENST00000530730 MIA2Q96PC5 1412 aa11.19□□□□□ -0.62
CHKA-205ENST00000530730 ATG7O95352 703 aa11.19□□□□□ -0.62
CHKA-205ENST00000530730 NAGPAQ9UK23 515 aa11.19□□□□□ -0.62
CHKA-205ENST00000530730 ZNF142P52746 1687 aaPredicted RBP11.19□□□□□ -0.62
CHKA-205ENST00000530730 DNMT1P26358 1616 aaKnown RBP11.19□□□□□ -0.62
CHKA-205ENST00000530730 PZPP20742 1482 aa11.19□□□□□ -0.62
CHKA-205ENST00000530730 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
CHKA-205ENST00000530730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHKA-205ENST00000530730 TBC1D8BQ0IIM8 1120 aa11.18□□□□□ -0.62
CHKA-205ENST00000530730 PSAPL1Q6NUJ1 521 aa11.18□□□□□ -0.62
CHKA-205ENST00000530730 TRPM4Q8TD43 1214 aa11.18□□□□□ -0.62
CHKA-205ENST00000530730 IFT43Q96FT9 208 aa11.18□□□□□ -0.62
CHKA-205ENST00000530730 JPH1Q9HDC5 661 aaPredicted RBP11.18□□□□□ -0.62
CHKA-205ENST00000530730 FRRS1LQ9P0K9 344 aa11.18□□□□□ -0.62
CHKA-205ENST00000530730 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
CHKA-205ENST00000530730 OPLAHO14841 1288 aa11.17□□□□□ -0.62
CHKA-205ENST00000530730 ZMYND15Q9H091 742 aa11.17□□□□□ -0.62
CHKA-205ENST00000530730 IGFLR1Q9H665 355 aa11.17□□□□□ -0.62
CHKA-205ENST00000530730 ZFATQ9P243 1243 aa11.17□□□□□ -0.62
CHKA-205ENST00000530730 KDM5DQ9BY66 1539 aa11.17□□□□□ -0.62
CHKA-205ENST00000530730 ARHGEF5Q12774 1597 aa11.16□□□□□ -0.62
CHKA-205ENST00000530730 AFF1P51825 1210 aaKnown RBP11.16□□□□□ -0.62
CHKA-205ENST00000530730 GPLD1P80108 840 aa11.16□□□□□ -0.62
CHKA-205ENST00000530730 COX20Q5RI15 118 aa11.16□□□□□ -0.62
CHKA-205ENST00000530730 DHX32Q7L7V1 743 aaKnown RBP11.16□□□□□ -0.62
CHKA-205ENST00000530730 TTC9Q92623 222 aa11.16□□□□□ -0.62
CHKA-205ENST00000530730 A0A0A0MRY4 1105 aa11.15□□□□□ -0.62
CHKA-205ENST00000530730 RGS9O75916 674 aaPredicted RBP11.15□□□□□ -0.62
CHKA-205ENST00000530730 ELNP15502 786 aa11.15□□□□□ -0.62
CHKA-205ENST00000530730 TRAPPC3LQ5T215 181 aa11.15□□□□□ -0.62
CHKA-205ENST00000530730 STK32AQ8WU08 396 aa11.15□□□□□ -0.62
CHKA-205ENST00000530730 RTCBQ9Y3I0 505 aaKnown RBP11.15□□□□□ -0.62
CHKA-205ENST00000530730 FAM135AQ9P2D6 1515 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 NLRP1Q9C000 1473 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 SHANK2Q9UPX8 1470 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 C9orf172C9J069 976 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 TOM1O60784 492 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
CHKA-205ENST00000530730 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 TREML1Q86YW5 311 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
CHKA-205ENST00000530730 PRMT3O60678 531 aa11.13□□□□□ -0.63
CHKA-205ENST00000530730 RARAP10276 462 aa11.13□□□□□ -0.63
CHKA-205ENST00000530730 TARSP26639 723 aaKnown RBP11.13□□□□□ -0.63
CHKA-205ENST00000530730 HSPA1LP34931 641 aa11.13□□□□□ -0.63
CHKA-205ENST00000530730 NRLP54845 237 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms