RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 IRS4O14654 1257 aaPredicted RBP11.61□□□□□ -0.55
MRPS28-207ENST00000521434 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
MRPS28-207ENST00000521434 RTL5Q5HYW3 569 aaPredicted RBP11.61□□□□□ -0.55
MRPS28-207ENST00000521434 PRAMEF18Q5VWM3 479 aa11.61□□□□□ -0.55
MRPS28-207ENST00000521434 INTS3Q68E01 1043 aaKnown RBP11.61□□□□□ -0.55
MRPS28-207ENST00000521434 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
MRPS28-207ENST00000521434 TRIOBPQ9H2D6 2365 aa11.61□□□□□ -0.55
MRPS28-207ENST00000521434 LAMB1P07942 1786 aa11.6□□□□□ -0.55
MRPS28-207ENST00000521434 USP17L3A6NCW0 530 aa11.6□□□□□ -0.55
MRPS28-207ENST00000521434 USP17L4A6NCW7 530 aa11.6□□□□□ -0.55
MRPS28-207ENST00000521434 ALDH1A1P00352 501 aa11.6□□□□□ -0.55
MRPS28-207ENST00000521434 USP17L1Q7RTZ2 530 aa11.6□□□□□ -0.55
MRPS28-207ENST00000521434 R3HDMLQ9H3Y0 253 aa11.6□□□□□ -0.55
MRPS28-207ENST00000521434 CHPF2Q9P2E5 772 aa11.6□□□□□ -0.55
MRPS28-207ENST00000521434 ZNF646O15015 1829 aaPredicted RBP11.6□□□□□ -0.55
MRPS28-207ENST00000521434 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
MRPS28-207ENST00000521434 HSP90B1P14625 803 aaKnown RBP11.59□□□□□ -0.55
MRPS28-207ENST00000521434 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
MRPS28-207ENST00000521434 FXR1P51114 621 aaKnown RBP eCLIP11.59□□□□□ -0.55
MRPS28-207ENST00000521434 RIPK4P57078 832 aa11.59□□□□□ -0.55
MRPS28-207ENST00000521434 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
MRPS28-207ENST00000521434 NBPF9Q3BBW0 867 aa11.59□□□□□ -0.55
MRPS28-207ENST00000521434 PODNQ7Z5L7 613 aa11.59□□□□□ -0.55
MRPS28-207ENST00000521434 SEC31BQ9NQW1 1179 aa11.59□□□□□ -0.55
MRPS28-207ENST00000521434 TRIM17Q9Y577 477 aa11.59□□□□□ -0.55
MRPS28-207ENST00000521434 PTPN12Q05209 780 aaKnown RBP11.58□□□□□ -0.56
MRPS28-207ENST00000521434 LMOD3Q0VAK6 560 aa11.58□□□□□ -0.56
MRPS28-207ENST00000521434 SPRYD7Q5W111 196 aa11.58□□□□□ -0.56
MRPS28-207ENST00000521434 OTOP1Q7RTM1 612 aa11.58□□□□□ -0.56
MRPS28-207ENST00000521434 ARMC9Q7Z3E5 817 aa11.58□□□□□ -0.56
MRPS28-207ENST00000521434 OGFOD1Q8N543 542 aa11.58□□□□□ -0.56
MRPS28-207ENST00000521434 A0A0C4DFX4 3053 aa11.58□□□□□ -0.56
MRPS28-207ENST00000521434 XDHP47989 1333 aa11.58□□□□□ -0.56
MRPS28-207ENST00000521434 WNT10BO00744 389 aa11.57□□□□□ -0.56
MRPS28-207ENST00000521434 KRT24Q2M2I5 525 aa11.57□□□□□ -0.56
MRPS28-207ENST00000521434 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
MRPS28-207ENST00000521434 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
MRPS28-207ENST00000521434 ZBTB38Q8NAP3 1195 aaPredicted RBP11.57□□□□□ -0.56
MRPS28-207ENST00000521434 DBF4Q9UBU7 674 aaPredicted RBP11.57□□□□□ -0.56
MRPS28-207ENST00000521434 SZT2Q5T011 3432 aa11.57□□□□□ -0.56
MRPS28-207ENST00000521434 SPEF2Q9C093 1822 aa11.57□□□□□ -0.56
MRPS28-207ENST00000521434 MYH3P11055 1940 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 MANSC4A6NHS7 340 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-207ENST00000521434 HOXB7P09629 217 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 ATP2B4P23634 1241 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
MRPS28-207ENST00000521434 INHBEP58166 350 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 LDLRAD1Q5T700 205 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 HYPKQ9NX55 129 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 MYO3BQ8WXR4 1341 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 ECM29Q5VYK3 1845 aa11.56□□□□□ -0.56
MRPS28-207ENST00000521434 CHL1O00533 1208 aa11.55□□□□□ -0.56
MRPS28-207ENST00000521434 MMP14P50281 582 aa11.55□□□□□ -0.56
MRPS28-207ENST00000521434 PRKG1Q13976 671 aa11.55□□□□□ -0.56
MRPS28-207ENST00000521434 DACT2Q5SW24 774 aa11.55□□□□□ -0.56
MRPS28-207ENST00000521434 APOBEC3FQ8IUX4 373 aaKnown RBP11.55□□□□□ -0.56
MRPS28-207ENST00000521434 ANKRD18AQ8IVF6 992 aa11.55□□□□□ -0.56
MRPS28-207ENST00000521434 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
MRPS28-207ENST00000521434 ERO1AQ96HE7 468 aa11.55□□□□□ -0.56
MRPS28-207ENST00000521434 ANGEL1Q9UNK9 670 aaKnown RBP11.55□□□□□ -0.56
MRPS28-207ENST00000521434 PTPN22Q9Y2R2 807 aa11.55□□□□□ -0.56
MRPS28-207ENST00000521434 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
MRPS28-207ENST00000521434 RANBP2P49792 3224 aaKnown RBP11.54□□□□□ -0.56
MRPS28-207ENST00000521434 PDE8AO60658 829 aa11.54□□□□□ -0.56
MRPS28-207ENST00000521434 SASH1O94885 1247 aa11.54□□□□□ -0.56
MRPS28-207ENST00000521434 ZBTB48P10074 688 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-207ENST00000521434 EN2P19622 333 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-207ENST00000521434 STRIP1Q5VSL9 837 aa11.54□□□□□ -0.56
MRPS28-207ENST00000521434 MIER1Q8N108 512 aa11.54□□□□□ -0.56
MRPS28-207ENST00000521434 SLC10A4Q96EP9 437 aa11.54□□□□□ -0.56
MRPS28-207ENST00000521434 MXD3Q9BW11 206 aa11.54□□□□□ -0.56
MRPS28-207ENST00000521434 COL1A1P02452 1464 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-207ENST00000521434 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-207ENST00000521434 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
MRPS28-207ENST00000521434 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
MRPS28-207ENST00000521434 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-207ENST00000521434 COLQQ9Y215 455 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-207ENST00000521434 LAS1LQ9Y4W2 734 aaKnown RBP11.53□□□□□ -0.56
MRPS28-207ENST00000521434 WTIPA6NIX2 430 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-207ENST00000521434 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
MRPS28-207ENST00000521434 GOLGA2Q08379 1002 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 MAP3K11Q16584 847 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 CCDC191Q8NCU4 936 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 CD99L2Q8TCZ2 262 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
MRPS28-207ENST00000521434 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 COA1Q9GZY4 146 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 EFCC1Q9HA90 598 aa11.52□□□□□ -0.57
MRPS28-207ENST00000521434 UNCXA6NJT0 531 aa11.51□□□□□ -0.57
MRPS28-207ENST00000521434 PPP1R12BO60237 982 aaPredicted RBP11.51□□□□□ -0.57
MRPS28-207ENST00000521434 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
MRPS28-207ENST00000521434 CRHR2Q13324 411 aa11.51□□□□□ -0.57
MRPS28-207ENST00000521434 TTLL5Q6EMB2 1281 aa11.51□□□□□ -0.57
MRPS28-207ENST00000521434 OTUD7BQ6GQQ9 843 aa11.51□□□□□ -0.57
MRPS28-207ENST00000521434 ZBED3Q96IU2 234 aaPredicted RBP11.51□□□□□ -0.57
MRPS28-207ENST00000521434 DEFB129Q9H1M3 183 aa11.51□□□□□ -0.57
MRPS28-207ENST00000521434 FZD1Q9UP38 647 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms