RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 EIF2AK2P19525 551 aaKnown RBP7.37□□□□□ -1.23
HMGB3P13-201ENST00000511263 NCAPG2Q86XI2 1143 aa7.37□□□□□ -1.23
HMGB3P13-201ENST00000511263 ZSCAN29Q8IWY8 852 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P13-201ENST00000511263 GJD3Q8N144 294 aa7.37□□□□□ -1.23
HMGB3P13-201ENST00000511263 TTC9Q92623 222 aa7.37□□□□□ -1.23
HMGB3P13-201ENST00000511263 DCTN4Q9UJW0 460 aa7.37□□□□□ -1.23
HMGB3P13-201ENST00000511263 SMNDC1O75940 238 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGB3P13-201ENST00000511263 CPB1P15086 417 aa7.36□□□□□ -1.23
HMGB3P13-201ENST00000511263 ARHGAP4P98171 946 aa7.36□□□□□ -1.23
HMGB3P13-201ENST00000511263 GRIK5Q16478 980 aa7.36□□□□□ -1.23
HMGB3P13-201ENST00000511263 RBCK1Q9BYM8 510 aa7.36□□□□□ -1.23
HMGB3P13-201ENST00000511263 EDN3P14138 238 aa7.35□□□□□ -1.23
HMGB3P13-201ENST00000511263 LPIN3Q9BQK8 851 aa7.35□□□□□ -1.23
HMGB3P13-201ENST00000511263 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
HMGB3P13-201ENST00000511263 CCDC87Q9NVE4 849 aa7.35□□□□□ -1.23
HMGB3P13-201ENST00000511263 ZBTB7CA1YPR0 619 aa7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 NOS3P29474 1203 aa7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 IREB2P48200 963 aaKnown RBP7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 MSL1Q68DK7 614 aa7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 WFDC12Q8WWY7 111 aa7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 NSUN5Q96P11 429 aaKnown RBP7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 GGNBP2Q9H3C7 697 aa7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 AMOTL2Q9Y2J4 779 aa7.34□□□□□ -1.23
HMGB3P13-201ENST00000511263 TNFRSF21O75509 655 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 KIF4AO95239 1232 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 MAPK1P28482 360 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 FGD1P98174 961 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 MLLT1Q03111 559 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 PERM1Q5SV97 790 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 PLD4Q96BZ4 506 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 MEGF10Q96KG7 1140 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 SMG9Q9H0W8 520 aaKnown RBP7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 DNAJC25Q9H1X3 360 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 TMEM63CQ9P1W3 806 aa7.33□□□□□ -1.24
HMGB3P13-201ENST00000511263 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P13-201ENST00000511263 HFE2Q6ZVN8 426 aa7.32□□□□□ -1.24
HMGB3P13-201ENST00000511263 FBXO11Q86XK2 927 aa7.32□□□□□ -1.24
HMGB3P13-201ENST00000511263 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
HMGB3P13-201ENST00000511263 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
HMGB3P13-201ENST00000511263 FAM129BQ96TA1 746 aa7.32□□□□□ -1.24
HMGB3P13-201ENST00000511263 SRA1Q9HD15 236 aaKnown RBP7.32□□□□□ -1.24
HMGB3P13-201ENST00000511263 DEAF1O75398 565 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P13-201ENST00000511263 FAM117BQ6P1L5 589 aa7.31□□□□□ -1.24
HMGB3P13-201ENST00000511263 MAP4K3Q8IVH8 894 aa7.31□□□□□ -1.24
HMGB3P13-201ENST00000511263 DTWD1Q8N5C7 304 aa7.31□□□□□ -1.24
HMGB3P13-201ENST00000511263 ALKBH8Q96BT7 664 aaKnown RBP7.31□□□□□ -1.24
HMGB3P13-201ENST00000511263 CPNE3O75131 537 aaKnown RBP7.3□□□□□ -1.24
HMGB3P13-201ENST00000511263 CABP4P57796 275 aa7.3□□□□□ -1.24
HMGB3P13-201ENST00000511263 ECM1Q16610 540 aa7.3□□□□□ -1.24
HMGB3P13-201ENST00000511263 SND1Q7KZF4 910 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB3P13-201ENST00000511263 C1orf127Q8N9H9 656 aa7.3□□□□□ -1.24
HMGB3P13-201ENST00000511263 ZFYVE28Q9HCC9 887 aa7.3□□□□□ -1.24
HMGB3P13-201ENST00000511263 A6NHS1 94 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 J3QW42 95 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 PTPRAP18433 802 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 KRTAP9-9Q9BYP9 154 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 KRTAP9-4Q9BYQ2 154 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 PBX4Q9BYU1 374 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 PPP4R2Q9NY27 417 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 SALL4Q9UJQ4 1053 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 RNF112Q9ULX5 631 aa7.29□□□□□ -1.24
HMGB3P13-201ENST00000511263 PLCB3Q01970 1234 aa7.28□□□□□ -1.24
HMGB3P13-201ENST00000511263 CEP135Q66GS9 1140 aa7.28□□□□□ -1.24
HMGB3P13-201ENST00000511263 CEP120Q8N960 986 aa7.28□□□□□ -1.24
HMGB3P13-201ENST00000511263 CNTN3Q9P232 1028 aa7.28□□□□□ -1.24
HMGB3P13-201ENST00000511263 ALX3O95076 343 aa7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 ERCC3P19447 782 aa7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 ATP2B2Q01814 1243 aa7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 GDF6Q6KF10 455 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 IGF2-ASQ6U949 168 aa7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 ASB16Q96NS5 453 aa7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 NIF3L1Q9GZT8 377 aa7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 BCL11AQ9H165 835 aa7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 KANSL3Q9P2N6 904 aa7.27□□□□□ -1.25
HMGB3P13-201ENST00000511263 DLL1O00548 723 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 CYP2E1P05181 493 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 CDC27P30260 824 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 ITGAEP38570 1179 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 PRR23CQ6ZRP0 262 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 TMC7Q7Z402 723 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 CHRDQ9H2X0 955 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 ZFYVE1Q9HBF4 777 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 NLRP2Q9NX02 1062 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 FOXD3Q9UJU5 478 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 PPME1Q9Y570 386 aa7.26□□□□□ -1.25
HMGB3P13-201ENST00000511263 PDE2AO00408 941 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 EREGO14944 169 aa7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 ARL4DP49703 201 aa7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 GALNT12Q8IXK2 581 aa7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 IL22RA1Q8N6P7 574 aa7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 TMEM102Q8N9M5 508 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 OSMRQ99650 979 aa7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 RASSF4Q9H2L5 321 aa7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 DZANK1Q9NVP4 752 aa7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 TRAK1Q9UPV9 953 aa7.25□□□□□ -1.25
HMGB3P13-201ENST00000511263 EIF1AYO14602 144 aaKnown RBP7.24□□□□□ -1.25
HMGB3P13-201ENST00000511263 TREHO43280 583 aa7.24□□□□□ -1.25
HMGB3P13-201ENST00000511263 CCDC27Q2M243 656 aa7.24□□□□□ -1.25
HMGB3P13-201ENST00000511263 FBF1Q8TES7 1133 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms