RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 PTPN22Q9Y2R2 807 aa12.81□□□□□ -0.36
SRSF4-205ENST00000497015 PITPNM2Q9BZ72 1349 aa12.81□□□□□ -0.36
SRSF4-205ENST00000497015 DLL1O00548 723 aa12.8□□□□□ -0.36
SRSF4-205ENST00000497015 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
SRSF4-205ENST00000497015 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
SRSF4-205ENST00000497015 LDLRAD1Q5T700 205 aa12.8□□□□□ -0.36
SRSF4-205ENST00000497015 SPRYD7Q5W111 196 aa12.8□□□□□ -0.36
SRSF4-205ENST00000497015 EYA3Q99504 573 aa12.8□□□□□ -0.36
SRSF4-205ENST00000497015 MXD3Q9BW11 206 aa12.8□□□□□ -0.36
SRSF4-205ENST00000497015 ZC3H12CQ9C0D7 883 aaKnown RBP12.8□□□□□ -0.36
SRSF4-205ENST00000497015 SEC31BQ9NQW1 1179 aa12.8□□□□□ -0.36
SRSF4-205ENST00000497015 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
SRSF4-205ENST00000497015 ANP32CO43423 234 aa12.79□□□□□ -0.36
SRSF4-205ENST00000497015 PRKG1Q13976 671 aa12.79□□□□□ -0.36
SRSF4-205ENST00000497015 ARMC5Q96C12 935 aa12.79□□□□□ -0.36
SRSF4-205ENST00000497015 ISCA1Q9BUE6 129 aa12.79□□□□□ -0.36
SRSF4-205ENST00000497015 ZNF609O15014 1411 aa12.79□□□□□ -0.36
SRSF4-205ENST00000497015 ATP5J2-PTCD1G3V325 749 aa12.78□□□□□ -0.36
SRSF4-205ENST00000497015 IGF2BP3O00425 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRSF4-205ENST00000497015 HSP90AB3PQ58FF7 597 aa12.78□□□□□ -0.36
SRSF4-205ENST00000497015 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
SRSF4-205ENST00000497015 IFNL1Q8IU54 200 aa12.78□□□□□ -0.36
SRSF4-205ENST00000497015 DDX60Q8IY21 1712 aaKnown RBP12.78□□□□□ -0.36
SRSF4-205ENST00000497015 H0YGN5 161 aa12.77□□□□□ -0.37
SRSF4-205ENST00000497015 WNT10BO00744 389 aa12.77□□□□□ -0.37
SRSF4-205ENST00000497015 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
SRSF4-205ENST00000497015 TTLL12Q14166 644 aaPredicted RBP12.77□□□□□ -0.37
SRSF4-205ENST00000497015 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
SRSF4-205ENST00000497015 KRT24Q2M2I5 525 aa12.77□□□□□ -0.37
SRSF4-205ENST00000497015 MAPK8IP3Q9UPT6 1336 aa12.77□□□□□ -0.37
SRSF4-205ENST00000497015 UFL1O94874 794 aa12.76□□□□□ -0.37
SRSF4-205ENST00000497015 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
SRSF4-205ENST00000497015 CD99L2Q8TCZ2 262 aa12.76□□□□□ -0.37
SRSF4-205ENST00000497015 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 CLMNQ96JQ2 1002 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 PTPN18Q99952 460 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 A0A0C4DFX4 3053 aa12.75□□□□□ -0.37
SRSF4-205ENST00000497015 COL6A3P12111 3177 aa12.74□□□□□ -0.37
SRSF4-205ENST00000497015 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
SRSF4-205ENST00000497015 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
SRSF4-205ENST00000497015 GJA5P36382 358 aa12.74□□□□□ -0.37
SRSF4-205ENST00000497015 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
SRSF4-205ENST00000497015 ZBED3Q96IU2 234 aaPredicted RBP12.74□□□□□ -0.37
SRSF4-205ENST00000497015 ZNF333Q96JL9 665 aa12.74□□□□□ -0.37
SRSF4-205ENST00000497015 ANKIB1Q9P2G1 1089 aa12.74□□□□□ -0.37
SRSF4-205ENST00000497015 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
SRSF4-205ENST00000497015 GGA1Q9UJY5 639 aa12.74□□□□□ -0.37
SRSF4-205ENST00000497015 RBBP6Q7Z6E9 1792 aaKnown RBP12.74□□□□□ -0.37
SRSF4-205ENST00000497015 G3V3G9 751 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 SASH1O94885 1247 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 INHBEP58166 350 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 LMOD3Q0VAK6 560 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 CRHR2Q13324 411 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 DCAF8Q5TAQ9 597 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 ANKRD13DQ6ZTN6 518 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 SLC17A8Q8NDX2 589 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 PLBD2Q8NHP8 589 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
SRSF4-205ENST00000497015 ANGEL1Q9UNK9 670 aaKnown RBP12.73□□□□□ -0.37
SRSF4-205ENST00000497015 KIAA0100Q14667 2235 aaKnown RBP12.73□□□□□ -0.37
SRSF4-205ENST00000497015 RANBP2P49792 3224 aaKnown RBP12.73□□□□□ -0.37
SRSF4-205ENST00000497015 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
SRSF4-205ENST00000497015 CHRDL2Q6WN34 429 aa12.72□□□□□ -0.37
SRSF4-205ENST00000497015 ARMC9Q7Z3E5 817 aa12.72□□□□□ -0.37
SRSF4-205ENST00000497015 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
SRSF4-205ENST00000497015 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
SRSF4-205ENST00000497015 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
SRSF4-205ENST00000497015 WNK4Q96J92 1243 aa12.72□□□□□ -0.37
SRSF4-205ENST00000497015 PRO3102Q9H379 93 aa12.72□□□□□ -0.37
SRSF4-205ENST00000497015 EFCC1Q9HA90 598 aa12.72□□□□□ -0.37
SRSF4-205ENST00000497015 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
SRSF4-205ENST00000497015 TRIM28Q13263 835 aaKnown RBP12.71□□□□□ -0.37
SRSF4-205ENST00000497015 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
SRSF4-205ENST00000497015 ERO1AQ96HE7 468 aa12.71□□□□□ -0.37
SRSF4-205ENST00000497015 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
SRSF4-205ENST00000497015 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
SRSF4-205ENST00000497015 PSME4Q14997 1843 aa12.7□□□□□ -0.38
SRSF4-205ENST00000497015 NF2P35240 595 aa12.7□□□□□ -0.38
SRSF4-205ENST00000497015 SP3Q02447 781 aa12.7□□□□□ -0.38
SRSF4-205ENST00000497015 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
SRSF4-205ENST00000497015 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
SRSF4-205ENST00000497015 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
SRSF4-205ENST00000497015 PTCH2Q9Y6C5 1203 aa12.7□□□□□ -0.38
SRSF4-205ENST00000497015 ZNF646O15015 1829 aaPredicted RBP12.69□□□□□ -0.38
SRSF4-205ENST00000497015 SSC5DA1L4H1 1573 aa12.69□□□□□ -0.38
SRSF4-205ENST00000497015 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
SRSF4-205ENST00000497015 MYCP01106 439 aaPredicted RBP12.69□□□□□ -0.38
SRSF4-205ENST00000497015 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
SRSF4-205ENST00000497015 GSE1Q14687 1217 aa12.69□□□□□ -0.38
SRSF4-205ENST00000497015 TRIOBPQ9H2D6 2365 aa12.69□□□□□ -0.38
SRSF4-205ENST00000497015 AOX1Q06278 1338 aa12.68□□□□□ -0.38
SRSF4-205ENST00000497015 GTPBP6O43824 516 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms