RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 SMC5Q8IY18 1101 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 SETD1AO15047 1707 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 NF2P35240 595 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 PLCG2P16885 1265 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 CHRNA5P30532 468 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 RNF41Q9H4P4 317 aaPredicted RBP11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 USP42Q9H9J4 1324 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 SF3A1Q15459 793 aaKnown RBP11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 EAPPQ56P03 285 aaPredicted RBP11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
GAPVD1-219ENST00000495955 AHDC1Q5TGY3 1603 aaPredicted RBP11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 PLSCR1O15162 318 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 PDE4BQ07343 736 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 LEMD3Q9Y2U8 911 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 NDUFB9Q9Y6M9 179 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 MAST3O60307 1309 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 PDE8BO95263 885 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 CASTP20810 708 aaKnown RBP11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 MCMDC2Q4G0Z9 681 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 OTUD7AQ8TE49 926 aaPredicted RBP11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 SLC16A10Q8TF71 515 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 LTBP4Q8N2S1 1624 aa11.21□□□□□ -0.61
GAPVD1-219ENST00000495955 A0A0G2JLW4 131 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 XBP1P17861 261 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 SAFBQ15424 915 aaKnown RBP eCLIP11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 MFSD14BQ5SR56 506 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 PDRG1Q9NUG6 133 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 ADCY9O60503 1353 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 RABEP1Q15276 862 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 TBC1D9Q6ZT07 1266 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 RTKN2Q8IZC4 609 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 FEZ1Q99689 392 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 DBNDD1Q9H9R9 158 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 COPRSQ9NQ92 184 aa11.21□□□□□ -0.62
GAPVD1-219ENST00000495955 NMIQ13287 307 aaPredicted RBP11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 TTLL5Q6EMB2 1281 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 PRR5LQ6MZQ0 368 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 H7C1D1 291 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 TNNI2P48788 182 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 IQCA1Q86XH1 822 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 TBC1D22AQ8WUA7 517 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 GBP4Q96PP9 640 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 VPS37CA5D8V6 355 aaPredicted RBP11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 CIAO1O76071 339 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 ZAP70P43403 619 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 UBE4AQ14139 1066 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 ANKRD1Q15327 319 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 BSDC1Q9NW68 430 aaPredicted RBP11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 MCM9Q9NXL9 1143 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
GAPVD1-219ENST00000495955 TSPY2A6NKD2 308 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 PDIA6Q15084 440 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 CCDC102BQ68D86 513 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 MFSD6Q6ZSS7 791 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 ZNF34Q8IZ26 560 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 PIBF1Q8WXW3 757 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 ZNF408Q9H9D4 720 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 BRMS1Q9HCU9 246 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 CC2D2BQ6DHV5 1058 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 TEX11Q8IYF3 940 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 TTF2Q9UNY4 1162 aaKnown RBP11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 TOPAZ1Q8N9V7 1692 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 LTN1O94822 1766 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 CDHR2Q9BYE9 1310 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 KIAA0825Q8IV33 1275 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 TAOK3Q9H2K8 898 aa11.19□□□□□ -0.62
GAPVD1-219ENST00000495955 MBD4O95243 580 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 DLGAP5Q15398 846 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 ZNF526Q8TF50 670 aaPredicted RBP11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 ANKRD26Q9UPS8 1709 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 GYS1P13807 737 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 CCDC96Q2M329 555 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 EAF2Q96CJ1 260 aaPredicted RBP11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 MTFR1LQ9H019 292 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 AATFQ9NY61 560 aaKnown RBP eCLIP11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 SAP30BPQ9UHR5 308 aaKnown RBP11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 SLIT2O94813 1529 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 GNAT2P19087 354 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 ADORA1P30542 326 aa11.18□□□□□ -0.62
GAPVD1-219ENST00000495955 SCNN1DP51172 638 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 PTPN12Q05209 780 aaKnown RBP11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 TNIP1Q15025 636 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 TRIM22Q8IYM9 498 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 IFIT3O14879 490 aaKnown RBP11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 TRIM28Q13263 835 aaKnown RBP11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 RAD17O75943 681 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 CLSTN1O94985 981 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 TSPY3P0CV98 308 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 TSPY8P0CW00 308 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 PHKA1P46020 1223 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms