RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 LAMB4A4D0S4 1761 aa13.11□□□□□ -0.31
RAB11FIP3-211ENST00000495663 KCNQ3O43525 872 aa13.1□□□□□ -0.31
RAB11FIP3-211ENST00000495663 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-211ENST00000495663 EZH2Q15910 746 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-211ENST00000495663 C4orf48Q5BLP8 95 aa13.1□□□□□ -0.31
RAB11FIP3-211ENST00000495663 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
RAB11FIP3-211ENST00000495663 MBIPQ9NS73 344 aa13.1□□□□□ -0.31
RAB11FIP3-211ENST00000495663 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-211ENST00000495663 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
RAB11FIP3-211ENST00000495663 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
RAB11FIP3-211ENST00000495663 TERTO14746 1132 aaKnown RBP13.09□□□□□ -0.31
RAB11FIP3-211ENST00000495663 TUSC1Q2TAM9 212 aa13.09□□□□□ -0.31
RAB11FIP3-211ENST00000495663 LCE2CQ5TA81 110 aa13.09□□□□□ -0.31
RAB11FIP3-211ENST00000495663 ZNF496Q96IT1 587 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP3-211ENST00000495663 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
RAB11FIP3-211ENST00000495663 E9PSI1 815 aa13.08□□□□□ -0.32
RAB11FIP3-211ENST00000495663 ADH1CP00326 375 aa13.08□□□□□ -0.32
RAB11FIP3-211ENST00000495663 WDR4P57081 412 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP3-211ENST00000495663 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP3-211ENST00000495663 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
RAB11FIP3-211ENST00000495663 C4BP0C0L5 1744 aa13.08□□□□□ -0.32
RAB11FIP3-211ENST00000495663 TIMP2P16035 220 aa13.07□□□□□ -0.32
RAB11FIP3-211ENST00000495663 MPNDQ8N594 471 aa13.07□□□□□ -0.32
RAB11FIP3-211ENST00000495663 TSR2Q969E8 191 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP3-211ENST00000495663 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
RAB11FIP3-211ENST00000495663 TEX13AQ9BXU3 409 aaPredicted RBP13.07□□□□□ -0.32
RAB11FIP3-211ENST00000495663 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
RAB11FIP3-211ENST00000495663 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
RAB11FIP3-211ENST00000495663 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
RAB11FIP3-211ENST00000495663 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-211ENST00000495663 KCNQ4P56696 695 aa13.06□□□□□ -0.32
RAB11FIP3-211ENST00000495663 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
RAB11FIP3-211ENST00000495663 ZFP42Q96MM3 310 aa13.06□□□□□ -0.32
RAB11FIP3-211ENST00000495663 YTHDC1Q96MU7 727 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-211ENST00000495663 GPBP1L1Q9HC44 474 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-211ENST00000495663 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
RAB11FIP3-211ENST00000495663 ITPK1Q13572 414 aa13.05□□□□□ -0.32
RAB11FIP3-211ENST00000495663 DNAJC10Q8IXB1 793 aa13.05□□□□□ -0.32
RAB11FIP3-211ENST00000495663 MYH14Q7Z406 1995 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-211ENST00000495663 STARD3NLO95772 234 aa13.04□□□□□ -0.32
RAB11FIP3-211ENST00000495663 BPHLQ86WA6 291 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-211ENST00000495663 LINC00116Q8NCU8 138 aa13.04□□□□□ -0.32
RAB11FIP3-211ENST00000495663 QSER1Q2KHR3 1735 aa13.04□□□□□ -0.32
RAB11FIP3-211ENST00000495663 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
RAB11FIP3-211ENST00000495663 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
RAB11FIP3-211ENST00000495663 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
RAB11FIP3-211ENST00000495663 HOXB7P09629 217 aa13.03□□□□□ -0.32
RAB11FIP3-211ENST00000495663 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
RAB11FIP3-211ENST00000495663 CDK15Q96Q40 435 aa13.03□□□□□ -0.32
RAB11FIP3-211ENST00000495663 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-211ENST00000495663 NR3C2P08235 984 aa13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 NBPF14Q5TI25 921 aa13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 DUSP27Q5VZP5 1158 aa13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 MRPL14Q6P1L8 145 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 TRMT2AQ8IZ69 625 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 PURBQ96QR8 312 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CNTNAP4Q9C0A0 1308 aa13.02□□□□□ -0.33
RAB11FIP3-211ENST00000495663 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 ELL2O00472 640 aaPredicted RBP13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CRKLP46109 303 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 VEGFBP49765 207 aa13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
RAB11FIP3-211ENST00000495663 ZIC2O95409 532 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-211ENST00000495663 EIF2S2P20042 333 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CTDSPL2Q05D32 466 aa13□□□□□ -0.33
RAB11FIP3-211ENST00000495663 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
RAB11FIP3-211ENST00000495663 TSPYL6Q8N831 410 aa13□□□□□ -0.33
RAB11FIP3-211ENST00000495663 ARMC2Q8NEN0 867 aa13□□□□□ -0.33
RAB11FIP3-211ENST00000495663 KLF16Q9BXK1 252 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-211ENST00000495663 ERBB4Q15303 1308 aa12.99□□□□□ -0.33
RAB11FIP3-211ENST00000495663 SLC15A2Q16348 729 aa12.99□□□□□ -0.33
RAB11FIP3-211ENST00000495663 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
RAB11FIP3-211ENST00000495663 ITPKCQ96DU7 683 aa12.99□□□□□ -0.33
RAB11FIP3-211ENST00000495663 KDM4CQ9H3R0 1056 aa12.99□□□□□ -0.33
RAB11FIP3-211ENST00000495663 SOBPA7XYQ1 873 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 A1BGP04217 495 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 GRM5P41594 1212 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 SCARF1Q14162 830 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 INTS5Q6P9B9 1019 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 FAM117AQ9C073 453 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 NXF1Q9UBU9 619 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 RTCBQ9Y3I0 505 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
RAB11FIP3-211ENST00000495663 VAMP4O75379 141 aa12.97□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP3-211ENST00000495663 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms