RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 ST5P78524 1137 aa24.14■■□□□ 1.45
LINC01558-202ENST00000495520 NBR1Q14596 966 aa24.14■■□□□ 1.45
LINC01558-202ENST00000495520 PUM3Q15397 648 aaKnown RBP24.14■■□□□ 1.45
LINC01558-202ENST00000495520 GORABQ5T7V8 394 aa24.14■■□□□ 1.45
LINC01558-202ENST00000495520 LPIN2Q92539 896 aa24.14■■□□□ 1.45
LINC01558-202ENST00000495520 PARP3Q9Y6F1 533 aa24.14■■□□□ 1.45
LINC01558-202ENST00000495520 MCMDC2Q4G0Z9 681 aa24.13■■□□□ 1.45
LINC01558-202ENST00000495520 ZNF589Q86UQ0 364 aaPredicted RBP24.13■■□□□ 1.45
LINC01558-202ENST00000495520 NLRP3Q96P20 1036 aa24.13■■□□□ 1.45
LINC01558-202ENST00000495520 TM6SF1Q9BZW5 370 aa24.13■■□□□ 1.45
LINC01558-202ENST00000495520 HELLSQ9NRZ9 838 aa24.13■■□□□ 1.45
LINC01558-202ENST00000495520 RBM8AQ9Y5S9 174 aaKnown RBP24.13■■□□□ 1.45
LINC01558-202ENST00000495520 IGHMBP2P38935 993 aaKnown RBP24.12■■□□□ 1.45
LINC01558-202ENST00000495520 ZMYM1Q5SVZ6 1142 aa24.12■■□□□ 1.45
LINC01558-202ENST00000495520 MPHOSPH8Q99549 860 aa24.12■■□□□ 1.45
LINC01558-202ENST00000495520 R3HDM1Q15032 1099 aaKnown RBP24.11■■□□□ 1.45
LINC01558-202ENST00000495520 CDC5LQ99459 802 aaKnown RBP24.11■■□□□ 1.45
LINC01558-202ENST00000495520 TNRC6CQ9HCJ0 1690 aaKnown RBP24.11■■□□□ 1.45
LINC01558-202ENST00000495520 CASZ1Q86V15 1759 aa24.11■■□□□ 1.45
LINC01558-202ENST00000495520 SCARF1Q14162 830 aa24.11■■□□□ 1.45
LINC01558-202ENST00000495520 RNF113AO15541 343 aaKnown RBP24.1■■□□□ 1.45
LINC01558-202ENST00000495520 ARID4AP29374 1257 aaPredicted RBP24.1■■□□□ 1.45
LINC01558-202ENST00000495520 TSGA10IPQ3SY00 556 aa24.1■■□□□ 1.45
LINC01558-202ENST00000495520 CREB3L3Q68CJ9 461 aa24.1■■□□□ 1.45
LINC01558-202ENST00000495520 PRPF40BQ6NWY9 871 aaKnown RBP24.1■■□□□ 1.45
LINC01558-202ENST00000495520 TTC14Q96N46 770 aa24.1■■□□□ 1.45
LINC01558-202ENST00000495520 SLC16A10Q8TF71 515 aa24.09■■□□□ 1.45
LINC01558-202ENST00000495520 ARAP2Q8WZ64 1704 aa24.09■■□□□ 1.45
LINC01558-202ENST00000495520 CHGBP05060 677 aa24.08■■□□□ 1.45
LINC01558-202ENST00000495520 LRRFIP1Q32MZ4 808 aaKnown RBP24.08■■□□□ 1.45
LINC01558-202ENST00000495520 ZFYP08048 801 aaPredicted RBP24.08■■□□□ 1.44
LINC01558-202ENST00000495520 UQCRFS1P1P0C7P4 283 aa24.08■■□□□ 1.44
LINC01558-202ENST00000495520 MCAMP43121 646 aa24.08■■□□□ 1.44
LINC01558-202ENST00000495520 CUL4AQ13619 759 aa24.08■■□□□ 1.44
LINC01558-202ENST00000495520 CCDC102BQ68D86 513 aa24.08■■□□□ 1.44
LINC01558-202ENST00000495520 UPF3BQ9BZI7 483 aaKnown RBP24.08■■□□□ 1.44
LINC01558-202ENST00000495520 ZSWIM6Q9HCJ5 1215 aa24.08■■□□□ 1.44
LINC01558-202ENST00000495520 NRXN2Q9P2S2 1712 aa24.07■■□□□ 1.44
LINC01558-202ENST00000495520 AKAP11Q9UKA4 1901 aa24.07■■□□□ 1.44
LINC01558-202ENST00000495520 SLC27A2O14975 620 aa24.07■■□□□ 1.44
LINC01558-202ENST00000495520 HSP90AA1P07900 732 aaKnown RBP24.07■■□□□ 1.44
LINC01558-202ENST00000495520 SLC5A1P13866 664 aa24.07■■□□□ 1.44
LINC01558-202ENST00000495520 ZAP70P43403 619 aa24.07■■□□□ 1.44
LINC01558-202ENST00000495520 FKBP4Q02790 459 aaKnown RBP eCLIP24.07■■□□□ 1.44
LINC01558-202ENST00000495520 HELBQ8NG08 1087 aaPredicted RBP24.07■■□□□ 1.44
LINC01558-202ENST00000495520 TMX3Q96JJ7 454 aa24.07■■□□□ 1.44
LINC01558-202ENST00000495520 SEC62Q99442 399 aaKnown RBP24.07■■□□□ 1.44
LINC01558-202ENST00000495520 BSDC1Q9NW68 430 aaPredicted RBP24.07■■□□□ 1.44
LINC01558-202ENST00000495520 HMG20BQ9P0W2 317 aa24.07■■□□□ 1.44
LINC01558-202ENST00000495520 COL4A1P02462 1669 aa24.06■■□□□ 1.44
LINC01558-202ENST00000495520 PSDA5PKW4 1024 aaPredicted RBP24.06■■□□□ 1.44
LINC01558-202ENST00000495520 ZBTB7AO95365 584 aa24.06■■□□□ 1.44
LINC01558-202ENST00000495520 ZKSCAN1P17029 563 aaPredicted RBP24.06■■□□□ 1.44
LINC01558-202ENST00000495520 CWC22Q9HCG8 908 aaKnown RBP24.06■■□□□ 1.44
LINC01558-202ENST00000495520 CHRNDQ07001 517 aa24.05■■□□□ 1.44
LINC01558-202ENST00000495520 RNF20Q5VTR2 975 aa24.05■■□□□ 1.44
LINC01558-202ENST00000495520 ANKRD18AQ8IVF6 992 aa24.05■■□□□ 1.44
LINC01558-202ENST00000495520 RPAP1Q9BWH6 1393 aaPredicted RBP24.05■■□□□ 1.44
LINC01558-202ENST00000495520 FRAT2O75474 233 aaPredicted RBP24.05■■□□□ 1.44
LINC01558-202ENST00000495520 PHKA1P46020 1223 aa24.05■■□□□ 1.44
LINC01558-202ENST00000495520 U3KPZ7 1027 aaPredicted RBP24.05■■□□□ 1.44
LINC01558-202ENST00000495520 ADCK5Q3MIX3 580 aa24.04■■□□□ 1.44
LINC01558-202ENST00000495520 DSCC1Q9BVC3 393 aa24.04■■□□□ 1.44
LINC01558-202ENST00000495520 KCNJ4P48050 445 aa24.03■■□□□ 1.44
LINC01558-202ENST00000495520 RAB3GAP1Q15042 981 aa24.03■■□□□ 1.44
LINC01558-202ENST00000495520 TTF1Q15361 905 aaPredicted RBP24.03■■□□□ 1.44
LINC01558-202ENST00000495520 CCDC129Q6ZRS4 1044 aa24.03■■□□□ 1.44
LINC01558-202ENST00000495520 INTS4Q96HW7 963 aaKnown RBP24.03■■□□□ 1.44
LINC01558-202ENST00000495520 VPS53Q5VIR6 699 aa24.02■■□□□ 1.44
LINC01558-202ENST00000495520 PI16Q6UXB8 463 aa24.02■■□□□ 1.44
LINC01558-202ENST00000495520 BRIP1Q9BX63 1249 aa24.02■■□□□ 1.44
LINC01558-202ENST00000495520 MAST3O60307 1309 aa24.02■■□□□ 1.44
LINC01558-202ENST00000495520 CYP2E1P05181 493 aaPredicted RBP24.02■■□□□ 1.44
LINC01558-202ENST00000495520 SLFNL1Q499Z3 407 aa24.02■■□□□ 1.44
LINC01558-202ENST00000495520 RPGRQ92834 1020 aaKnown RBP24.02■■□□□ 1.44
LINC01558-202ENST00000495520 OSBP2Q969R2 916 aa24.02■■□□□ 1.44
LINC01558-202ENST00000495520 JAKMIP1Q96N16 626 aaKnown RBP24.02■■□□□ 1.44
LINC01558-202ENST00000495520 FOXD4L1Q9NU39 408 aa24.02■■□□□ 1.44
LINC01558-202ENST00000495520 CASTP20810 708 aaKnown RBP24.01■■□□□ 1.43
LINC01558-202ENST00000495520 PSMA5P28066 241 aa24.01■■□□□ 1.43
LINC01558-202ENST00000495520 RUFY3Q7L099 469 aa24.01■■□□□ 1.43
LINC01558-202ENST00000495520 CELF1Q92879 486 aaKnown RBP24.01■■□□□ 1.43
LINC01558-202ENST00000495520 ALDH8A1Q9H2A2 487 aaPredicted RBP24.01■■□□□ 1.43
LINC01558-202ENST00000495520 MINPP1Q9UNW1 487 aa24.01■■□□□ 1.43
LINC01558-202ENST00000495520 ATF5Q9Y2D1 282 aaPredicted RBP24.01■■□□□ 1.43
LINC01558-202ENST00000495520 ANKRD31Q8N7Z5 1873 aa24.01■■□□□ 1.43
LINC01558-202ENST00000495520 TAF1P21675 1872 aa24■■□□□ 1.43
LINC01558-202ENST00000495520 SNAP23O00161 211 aa24■■□□□ 1.43
LINC01558-202ENST00000495520 CRY2Q49AN0 593 aa24■■□□□ 1.43
LINC01558-202ENST00000495520 APPBP2Q92624 585 aa24■■□□□ 1.43
LINC01558-202ENST00000495520 MTFR1LQ9H019 292 aa24■■□□□ 1.43
LINC01558-202ENST00000495520 CYP46A1Q9Y6A2 500 aa24■■□□□ 1.43
LINC01558-202ENST00000495520 RPS8P62241 208 aaKnown RBP23.99■■□□□ 1.43
LINC01558-202ENST00000495520 UBE4AQ14139 1066 aa23.99■■□□□ 1.43
LINC01558-202ENST00000495520 ZSCAN25Q6NSZ9 544 aa23.99■■□□□ 1.43
LINC01558-202ENST00000495520 M0R2C6 588 aa23.99■■□□□ 1.43
LINC01558-202ENST00000495520 AK2P54819 239 aa23.99■■□□□ 1.43
LINC01558-202ENST00000495520 KRT32Q14532 448 aa23.99■■□□□ 1.43
LINC01558-202ENST00000495520 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.99■■□□□ 1.43
LINC01558-202ENST00000495520 PIH1D3Q9NQM4 214 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms