RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 NEXNQ0ZGT2 675 aa18.34■□□□□ 0.53
VARS-228ENST00000495010 NBPF9Q3BBW0 867 aa18.34■□□□□ 0.53
VARS-228ENST00000495010 PRAMEF18Q5VWM3 479 aa18.34■□□□□ 0.53
VARS-228ENST00000495010 BSDC1Q9NW68 430 aaPredicted RBP18.34■□□□□ 0.53
VARS-228ENST00000495010 HPS5Q9UPZ3 1129 aa18.34■□□□□ 0.53
VARS-228ENST00000495010 PSME4Q14997 1843 aa18.34■□□□□ 0.53
VARS-228ENST00000495010 APAF1O14727 1248 aa18.33■□□□□ 0.52
VARS-228ENST00000495010 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
VARS-228ENST00000495010 MINPP1Q9UNW1 487 aa18.33■□□□□ 0.52
VARS-228ENST00000495010 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
VARS-228ENST00000495010 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
VARS-228ENST00000495010 ZNF296Q8WUU4 475 aaPredicted RBP18.32■□□□□ 0.52
VARS-228ENST00000495010 COA1Q9GZY4 146 aa18.32■□□□□ 0.52
VARS-228ENST00000495010 IGHMBP2P38935 993 aaKnown RBP18.31■□□□□ 0.52
VARS-228ENST00000495010 MMP14P50281 582 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 SREBF2Q12772 1141 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 MKRN3Q13064 507 aaKnown RBP18.31■□□□□ 0.52
VARS-228ENST00000495010 DACT2Q5SW24 774 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 STRIP1Q5VSL9 837 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 ARMC9Q7Z3E5 817 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 TTLL11Q8NHH1 800 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 MXD3Q9BW11 206 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 GREM2Q9H772 168 aa18.31■□□□□ 0.52
VARS-228ENST00000495010 PI4KAP2A4QPH2 592 aa18.3■□□□□ 0.52
VARS-228ENST00000495010 WTIPA6NIX2 430 aaPredicted RBP18.3■□□□□ 0.52
VARS-228ENST00000495010 WNT10BO00744 389 aa18.3■□□□□ 0.52
VARS-228ENST00000495010 TM4SF4P48230 202 aa18.3■□□□□ 0.52
VARS-228ENST00000495010 PI4KAP1Q8N8J0 262 aa18.3■□□□□ 0.52
VARS-228ENST00000495010 LEMD3Q9Y2U8 911 aa18.3■□□□□ 0.52
VARS-228ENST00000495010 GPR25O00155 361 aa18.29■□□□□ 0.52
VARS-228ENST00000495010 PRKG1Q13976 671 aa18.29■□□□□ 0.52
VARS-228ENST00000495010 PRPF38BQ5VTL8 546 aaKnown RBP18.29■□□□□ 0.52
VARS-228ENST00000495010 TTLL5Q6EMB2 1281 aa18.29■□□□□ 0.52
VARS-228ENST00000495010 APOBEC3FQ8IUX4 373 aaKnown RBP18.29■□□□□ 0.52
VARS-228ENST00000495010 SASH1O94885 1247 aa18.28■□□□□ 0.52
VARS-228ENST00000495010 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
VARS-228ENST00000495010 KCNJ4P48050 445 aa18.28■□□□□ 0.52
VARS-228ENST00000495010 ANKRD2Q9GZV1 360 aa18.28■□□□□ 0.52
VARS-228ENST00000495010 PDE4DIPQ5VU43 2346 aa18.27■□□□□ 0.52
VARS-228ENST00000495010 CWF19L2Q2TBE0 894 aaKnown RBP18.27■□□□□ 0.52
VARS-228ENST00000495010 KIAA0825Q8IV33 1275 aa18.27■□□□□ 0.52
VARS-228ENST00000495010 MPHOSPH8Q99549 860 aa18.27■□□□□ 0.52
VARS-228ENST00000495010 SPEF2Q9C093 1822 aa18.27■□□□□ 0.52
VARS-228ENST00000495010 ZNF804BA4D1E1 1349 aa18.26■□□□□ 0.51
VARS-228ENST00000495010 FKTNO75072 461 aa18.26■□□□□ 0.51
VARS-228ENST00000495010 PTPN12Q05209 780 aaKnown RBP18.26■□□□□ 0.51
VARS-228ENST00000495010 NOM1Q5C9Z4 860 aaKnown RBP18.26■□□□□ 0.51
VARS-228ENST00000495010 FBXO46Q6PJ61 603 aaPredicted RBP18.26■□□□□ 0.51
VARS-228ENST00000495010 UBE3BQ7Z3V4 1068 aa18.26■□□□□ 0.51
VARS-228ENST00000495010 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
VARS-228ENST00000495010 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.26■□□□□ 0.51
VARS-228ENST00000495010 ANGEL1Q9UNK9 670 aaKnown RBP18.26■□□□□ 0.51
VARS-228ENST00000495010 MYH3P11055 1940 aa18.25■□□□□ 0.51
VARS-228ENST00000495010 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
VARS-228ENST00000495010 ALDH1A1P00352 501 aa18.25■□□□□ 0.51
VARS-228ENST00000495010 GTF2IP78347 998 aa18.25■□□□□ 0.51
VARS-228ENST00000495010 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
VARS-228ENST00000495010 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
VARS-228ENST00000495010 H7C1W4 665 aa18.24■□□□□ 0.51
VARS-228ENST00000495010 ITGA6P23229 1130 aa18.24■□□□□ 0.51
VARS-228ENST00000495010 SLC10A4Q96EP9 437 aa18.24■□□□□ 0.51
VARS-228ENST00000495010 DLGAP5Q15398 846 aa18.23■□□□□ 0.51
VARS-228ENST00000495010 SPRYD7Q5W111 196 aa18.23■□□□□ 0.51
VARS-228ENST00000495010 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
VARS-228ENST00000495010 TNRC18O15417 2968 aaPredicted RBP18.22■□□□□ 0.51
VARS-228ENST00000495010 MANSC4A6NHS7 340 aaPredicted RBP18.22■□□□□ 0.51
VARS-228ENST00000495010 SLC4A2P04920 1241 aa18.22■□□□□ 0.51
VARS-228ENST00000495010 INHBEP58166 350 aa18.22■□□□□ 0.51
VARS-228ENST00000495010 CFHR5Q9BXR6 569 aa18.22■□□□□ 0.51
VARS-228ENST00000495010 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
VARS-228ENST00000495010 MYO1BO43795 1136 aa18.21■□□□□ 0.51
VARS-228ENST00000495010 PPP1R12BO60237 982 aaPredicted RBP18.21■□□□□ 0.51
VARS-228ENST00000495010 KLRK1P26718 216 aa18.21■□□□□ 0.51
VARS-228ENST00000495010 GCKRQ14397 625 aa18.21■□□□□ 0.51
VARS-228ENST00000495010 TWISTNBQ3B726 338 aaPredicted RBP18.21■□□□□ 0.51
VARS-228ENST00000495010 LDLRAD1Q5T700 205 aa18.21■□□□□ 0.51
VARS-228ENST00000495010 PLA2G12BQ9BX93 195 aa18.21■□□□□ 0.51
VARS-228ENST00000495010 DEFB129Q9H1M3 183 aa18.21■□□□□ 0.51
VARS-228ENST00000495010 COL1A1P02452 1464 aaPredicted RBP18.2■□□□□ 0.5
VARS-228ENST00000495010 ANKRD18BA2A2Z9 1011 aa18.2■□□□□ 0.5
VARS-228ENST00000495010 CHRNDQ07001 517 aa18.2■□□□□ 0.5
VARS-228ENST00000495010 G2E3Q7L622 706 aa18.2■□□□□ 0.5
VARS-228ENST00000495010 CD209Q9NNX6 404 aa18.2■□□□□ 0.5
VARS-228ENST00000495010 ZBED3Q96IU2 234 aaPredicted RBP18.19■□□□□ 0.5
VARS-228ENST00000495010 R3HDMLQ9H3Y0 253 aa18.19■□□□□ 0.5
VARS-228ENST00000495010 FZD1Q9UP38 647 aa18.19■□□□□ 0.5
VARS-228ENST00000495010 PPP2R3BQ9Y5P8 575 aa18.19■□□□□ 0.5
VARS-228ENST00000495010 ZNF646O15015 1829 aaPredicted RBP18.19■□□□□ 0.5
VARS-228ENST00000495010 F8W031 263 aaPredicted RBP18.18■□□□□ 0.5
VARS-228ENST00000495010 CSF1RP07333 972 aa18.18■□□□□ 0.5
VARS-228ENST00000495010 ZBTB48P10074 688 aaPredicted RBP18.18■□□□□ 0.5
VARS-228ENST00000495010 FLIIQ13045 1269 aa18.18■□□□□ 0.5
VARS-228ENST00000495010 FKBP5Q13451 457 aaPredicted RBP18.18■□□□□ 0.5
VARS-228ENST00000495010 SUPT20HL1Q3ZLR7 823 aa18.18■□□□□ 0.5
VARS-228ENST00000495010 IFNL1Q8IU54 200 aa18.18■□□□□ 0.5
VARS-228ENST00000495010 TRIM17Q9Y577 477 aa18.18■□□□□ 0.5
VARS-228ENST00000495010 TAF5LO75529 589 aa18.17■□□□□ 0.5
VARS-228ENST00000495010 OTUD7BQ6GQQ9 843 aa18.17■□□□□ 0.5
VARS-228ENST00000495010 ZNF804AQ7Z570 1209 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms