RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TTLL12Q14166 644 aaPredicted RBP22.8■■□□□ 1.24
NUP50-218ENST00000493456 NBPF9Q3BBW0 867 aa22.8■■□□□ 1.24
NUP50-218ENST00000493456 BSDC1Q9NW68 430 aaPredicted RBP22.8■■□□□ 1.24
NUP50-218ENST00000493456 HTTP42858 3142 aa22.8■■□□□ 1.24
NUP50-218ENST00000493456 TBC1D8O95759 1140 aa22.79■■□□□ 1.24
NUP50-218ENST00000493456 SREBF2Q12772 1141 aa22.79■■□□□ 1.24
NUP50-218ENST00000493456 DACT2Q5SW24 774 aa22.79■■□□□ 1.24
NUP50-218ENST00000493456 SCAF8Q9UPN6 1271 aaKnown RBP22.79■■□□□ 1.24
NUP50-218ENST00000493456 WNT10BO00744 389 aa22.78■■□□□ 1.24
NUP50-218ENST00000493456 STRIP1Q5VSL9 837 aa22.78■■□□□ 1.24
NUP50-218ENST00000493456 JARID2Q92833 1246 aaPredicted RBP22.78■■□□□ 1.24
NUP50-218ENST00000493456 MINPP1Q9UNW1 487 aa22.78■■□□□ 1.24
NUP50-218ENST00000493456 ZNF646O15015 1829 aaPredicted RBP22.78■■□□□ 1.24
NUP50-218ENST00000493456 GPR25O00155 361 aa22.77■■□□□ 1.24
NUP50-218ENST00000493456 ELL2O00472 640 aaPredicted RBP22.77■■□□□ 1.24
NUP50-218ENST00000493456 CCDC30Q5VVM6 783 aa22.77■■□□□ 1.24
NUP50-218ENST00000493456 PRAMEF18Q5VWM3 479 aa22.77■■□□□ 1.24
NUP50-218ENST00000493456 CFHR5Q9BXR6 569 aa22.77■■□□□ 1.24
NUP50-218ENST00000493456 COA1Q9GZY4 146 aa22.77■■□□□ 1.24
NUP50-218ENST00000493456 CCT4P50991 539 aaKnown RBP22.76■■□□□ 1.23
NUP50-218ENST00000493456 FBXO46Q6PJ61 603 aaPredicted RBP22.76■■□□□ 1.23
NUP50-218ENST00000493456 TTLL11Q8NHH1 800 aa22.76■■□□□ 1.23
NUP50-218ENST00000493456 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
NUP50-218ENST00000493456 MYH3P11055 1940 aa22.76■■□□□ 1.23
NUP50-218ENST00000493456 MKI67P46013 3256 aaKnown RBP22.76■■□□□ 1.23
NUP50-218ENST00000493456 ARMC9Q7Z3E5 817 aa22.75■■□□□ 1.23
NUP50-218ENST00000493456 FBXW7Q969H0 707 aa22.75■■□□□ 1.23
NUP50-218ENST00000493456 GREM2Q9H772 168 aa22.75■■□□□ 1.23
NUP50-218ENST00000493456 CENPFP49454 3210 aa22.74■■□□□ 1.23
NUP50-218ENST00000493456 SPEF2Q9C093 1822 aa22.74■■□□□ 1.23
NUP50-218ENST00000493456 APOBEC3FQ8IUX4 373 aaKnown RBP22.74■■□□□ 1.23
NUP50-218ENST00000493456 MXD3Q9BW11 206 aa22.74■■□□□ 1.23
NUP50-218ENST00000493456 LEMD3Q9Y2U8 911 aa22.74■■□□□ 1.23
NUP50-218ENST00000493456 COL1A1P02452 1464 aaPredicted RBP22.73■■□□□ 1.23
NUP50-218ENST00000493456 WTIPA6NIX2 430 aaPredicted RBP22.73■■□□□ 1.23
NUP50-218ENST00000493456 IGKV5-2P06315 115 aa22.73■■□□□ 1.23
NUP50-218ENST00000493456 NEXNQ0ZGT2 675 aa22.73■■□□□ 1.23
NUP50-218ENST00000493456 KSR2Q6VAB6 950 aa22.73■■□□□ 1.23
NUP50-218ENST00000493456 C8orf58Q8NAV2 365 aa22.73■■□□□ 1.23
NUP50-218ENST00000493456 FKTNO75072 461 aa22.72■■□□□ 1.23
NUP50-218ENST00000493456 SASH1O94885 1247 aa22.72■■□□□ 1.23
NUP50-218ENST00000493456 ALDH1A1P00352 501 aa22.72■■□□□ 1.23
NUP50-218ENST00000493456 MKRN3Q13064 507 aaKnown RBP22.72■■□□□ 1.23
NUP50-218ENST00000493456 PI4KAP2A4QPH2 592 aa22.71■■□□□ 1.23
NUP50-218ENST00000493456 APAF1O14727 1248 aa22.71■■□□□ 1.23
NUP50-218ENST00000493456 IGHMBP2P38935 993 aaKnown RBP22.71■■□□□ 1.23
NUP50-218ENST00000493456 PTPN12Q05209 780 aaKnown RBP22.71■■□□□ 1.23
NUP50-218ENST00000493456 TTLL5Q6EMB2 1281 aa22.71■■□□□ 1.23
NUP50-218ENST00000493456 PI4KAP1Q8N8J0 262 aa22.71■■□□□ 1.23
NUP50-218ENST00000493456 DDX10Q13206 875 aaKnown RBP22.7■■□□□ 1.22
NUP50-218ENST00000493456 ZNF804BA4D1E1 1349 aa22.69■■□□□ 1.22
NUP50-218ENST00000493456 LDLRAD1Q5T700 205 aa22.69■■□□□ 1.22
NUP50-218ENST00000493456 SPRYD7Q5W111 196 aa22.69■■□□□ 1.22
NUP50-218ENST00000493456 TXNRD3Q86VQ6 643 aa22.69■■□□□ 1.22
NUP50-218ENST00000493456 ZBED3Q96IU2 234 aaPredicted RBP22.69■■□□□ 1.22
NUP50-218ENST00000493456 ANKRD2Q9GZV1 360 aa22.69■■□□□ 1.22
NUP50-218ENST00000493456 NEURL1BA8MQ27 555 aa22.68■■□□□ 1.22
NUP50-218ENST00000493456 KIAA0825Q8IV33 1275 aa22.68■■□□□ 1.22
NUP50-218ENST00000493456 BRCA2P51587 3418 aa22.67■■□□□ 1.22
NUP50-218ENST00000493456 INHBEP58166 350 aa22.67■■□□□ 1.22
NUP50-218ENST00000493456 PRKG1Q13976 671 aa22.67■■□□□ 1.22
NUP50-218ENST00000493456 CWF19L2Q2TBE0 894 aaKnown RBP22.67■■□□□ 1.22
NUP50-218ENST00000493456 GCC1Q96CN9 775 aa22.67■■□□□ 1.22
NUP50-218ENST00000493456 STK31Q9BXU1 1019 aa22.67■■□□□ 1.22
NUP50-218ENST00000493456 ANGEL1Q9UNK9 670 aaKnown RBP22.67■■□□□ 1.22
NUP50-218ENST00000493456 MANSC4A6NHS7 340 aaPredicted RBP22.66■■□□□ 1.22
NUP50-218ENST00000493456 H7C1W4 665 aa22.66■■□□□ 1.22
NUP50-218ENST00000493456 UBE3BQ7Z3V4 1068 aa22.66■■□□□ 1.22
NUP50-218ENST00000493456 MPHOSPH8Q99549 860 aa22.66■■□□□ 1.22
NUP50-218ENST00000493456 PLA2G12BQ9BX93 195 aa22.66■■□□□ 1.22
NUP50-218ENST00000493456 ZBTB48P10074 688 aaPredicted RBP22.65■■□□□ 1.22
NUP50-218ENST00000493456 GTF2IP78347 998 aa22.65■■□□□ 1.22
NUP50-218ENST00000493456 MAP3K11Q16584 847 aa22.65■■□□□ 1.22
NUP50-218ENST00000493456 TSPYL6Q8N831 410 aa22.65■■□□□ 1.22
NUP50-218ENST00000493456 DEFB129Q9H1M3 183 aa22.65■■□□□ 1.22
NUP50-218ENST00000493456 R3HDMLQ9H3Y0 253 aa22.65■■□□□ 1.22
NUP50-218ENST00000493456 PPP2R3BQ9Y5P8 575 aa22.65■■□□□ 1.22
NUP50-218ENST00000493456 LAMB1P07942 1786 aa22.64■■□□□ 1.22
NUP50-218ENST00000493456 UNCXA6NJT0 531 aa22.64■■□□□ 1.21
NUP50-218ENST00000493456 ITGA6P23229 1130 aa22.64■■□□□ 1.21
NUP50-218ENST00000493456 KLRK1P26718 216 aa22.64■■□□□ 1.21
NUP50-218ENST00000493456 KCNJ4P48050 445 aa22.64■■□□□ 1.21
NUP50-218ENST00000493456 PPP1R12BO60237 982 aaPredicted RBP22.63■■□□□ 1.21
NUP50-218ENST00000493456 DLGAP5Q15398 846 aa22.63■■□□□ 1.21
NUP50-218ENST00000493456 IFNL1Q8IU54 200 aa22.63■■□□□ 1.21
NUP50-218ENST00000493456 MTMR14Q8NCE2 650 aa22.63■■□□□ 1.21
NUP50-218ENST00000493456 SLC10A4Q96EP9 437 aa22.63■■□□□ 1.21
NUP50-218ENST00000493456 CD209Q9NNX6 404 aa22.63■■□□□ 1.21
NUP50-218ENST00000493456 INTS3Q68E01 1043 aaKnown RBP22.62■■□□□ 1.21
NUP50-218ENST00000493456 PRKRIP1Q9H875 184 aaPredicted RBP22.62■■□□□ 1.21
NUP50-218ENST00000493456 ECM29Q5VYK3 1845 aa22.61■■□□□ 1.21
NUP50-218ENST00000493456 SSC5DA1L4H1 1573 aa22.61■■□□□ 1.21
NUP50-218ENST00000493456 CHRNDQ07001 517 aa22.61■■□□□ 1.21
NUP50-218ENST00000493456 GCKRQ14397 625 aa22.61■■□□□ 1.21
NUP50-218ENST00000493456 WNK4Q96J92 1243 aa22.61■■□□□ 1.21
NUP50-218ENST00000493456 MYH16Q9H6N6 1097 aa22.61■■□□□ 1.21
NUP50-218ENST00000493456 TRIM17Q9Y577 477 aa22.61■■□□□ 1.21
NUP50-218ENST00000493456 MYO1BO43795 1136 aa22.6■■□□□ 1.21
NUP50-218ENST00000493456 CSF1RP07333 972 aa22.6■■□□□ 1.21
NUP50-218ENST00000493456 OTOP1Q7RTM1 612 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms