RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 COLQQ9Y215 455 aaPredicted RBP7.51□□□□□ -1.21
A1CF-210ENST00000493415 USP17L3A6NCW0 530 aa7.5□□□□□ -1.21
A1CF-210ENST00000493415 USP17L4A6NCW7 530 aa7.5□□□□□ -1.21
A1CF-210ENST00000493415 MANSC4A6NHS7 340 aaPredicted RBP7.5□□□□□ -1.21
A1CF-210ENST00000493415 IRS4O14654 1257 aaPredicted RBP7.5□□□□□ -1.21
A1CF-210ENST00000493415 RPS8P62241 208 aaKnown RBP7.5□□□□□ -1.21
A1CF-210ENST00000493415 PTPN12Q05209 780 aaKnown RBP7.5□□□□□ -1.21
A1CF-210ENST00000493415 PDIA6Q15084 440 aa7.5□□□□□ -1.21
A1CF-210ENST00000493415 NBPF9Q3BBW0 867 aa7.5□□□□□ -1.21
A1CF-210ENST00000493415 USP17L1Q7RTZ2 530 aa7.5□□□□□ -1.21
A1CF-210ENST00000493415 LRP10Q7Z4F1 713 aa7.5□□□□□ -1.21
A1CF-210ENST00000493415 CCER1Q8TC90 406 aaPredicted RBP7.5□□□□□ -1.21
A1CF-210ENST00000493415 EFCC1Q9HA90 598 aa7.5□□□□□ -1.21
A1CF-210ENST00000493415 LAS1LQ9Y4W2 734 aaKnown RBP7.5□□□□□ -1.21
A1CF-210ENST00000493415 LAMB1P07942 1786 aa7.5□□□□□ -1.21
A1CF-210ENST00000493415 ZNF646O15015 1829 aaPredicted RBP7.5□□□□□ -1.21
A1CF-210ENST00000493415 DLL1O00548 723 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 SF3B3Q15393 1217 aaKnown RBP7.49□□□□□ -1.21
A1CF-210ENST00000493415 SPRYD7Q5W111 196 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 IFNL1Q8IU54 200 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 APOBEC3FQ8IUX4 373 aaKnown RBP7.49□□□□□ -1.21
A1CF-210ENST00000493415 MXD3Q9BW11 206 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 PNNQ9H307 717 aaKnown RBP7.49□□□□□ -1.21
A1CF-210ENST00000493415 SEC31BQ9NQW1 1179 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 CHPF2Q9P2E5 772 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 FZD1Q9UP38 647 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 PTPN22Q9Y2R2 807 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 OTOFQ9HC10 1997 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 XDHP47989 1333 aa7.49□□□□□ -1.21
A1CF-210ENST00000493415 WNT10BO00744 389 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 HSP90B1P14625 803 aaKnown RBP7.48□□□□□ -1.21
A1CF-210ENST00000493415 ATP2B4P23634 1241 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 SLC9C1Q4G0N8 1177 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 CCDC152Q4G0S7 254 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 HDGFL1Q5TGJ6 251 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 OTUD7BQ6GQQ9 843 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 CHRDL2Q6WN34 429 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 ANKRD18AQ8IVF6 992 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 SLC17A8Q8NDX2 589 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 PLBD2Q8NHP8 589 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 SLC10A4Q96EP9 437 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 WNK4Q96J92 1243 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 CFHR5Q9BXR6 569 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 PODXL2Q9NZ53 605 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 MYO3BQ8WXR4 1341 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 ZSWIM8A7E2V4 1837 aa7.48□□□□□ -1.21
A1CF-210ENST00000493415 H0YGN5 161 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 IGF2BP3O00425 579 aaKnown RBP eCLIP7.47□□□□□ -1.21
A1CF-210ENST00000493415 PPP1R12BO60237 982 aaPredicted RBP7.47□□□□□ -1.21
A1CF-210ENST00000493415 RIPK4P57078 832 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 INHBEP58166 350 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 GOLGA2Q08379 1002 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 LMOD3Q0VAK6 560 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 CRHR2Q13324 411 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 KRT24Q2M2I5 525 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 ANKRD13DQ6ZTN6 518 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 RIC3Q7Z5B4 369 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 PODNQ7Z5L7 613 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 NBPF11Q86T75 865 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 KIAA0825Q8IV33 1275 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 ARMC5Q96C12 935 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 GMLQ99445 158 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 ISCA1Q9BUE6 129 aa7.47□□□□□ -1.21
A1CF-210ENST00000493415 COL1A1P02452 1464 aaPredicted RBP7.47□□□□□ -1.21
A1CF-210ENST00000493415 TRIOBPQ9H2D6 2365 aa7.46□□□□□ -1.21
A1CF-210ENST00000493415 ECM2O94769 699 aaPredicted RBP7.46□□□□□ -1.22
A1CF-210ENST00000493415 ZBTB48P10074 688 aaPredicted RBP7.46□□□□□ -1.22
A1CF-210ENST00000493415 SP3Q02447 781 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 ARHGEF6Q15052 776 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 DPF3Q92784 378 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 CLMNQ96JQ2 1002 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 PLEKHF1Q96S99 279 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 MYD88Q99836 296 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 PTCH2Q9Y6C5 1203 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 MED23Q9ULK4 1368 aa7.46□□□□□ -1.22
A1CF-210ENST00000493415 PDE8AO60658 829 aa7.45□□□□□ -1.22
A1CF-210ENST00000493415 KCNJ4P48050 445 aa7.45□□□□□ -1.22
A1CF-210ENST00000493415 IREB2P48200 963 aaKnown RBP7.45□□□□□ -1.22
A1CF-210ENST00000493415 NEUROD2Q15784 382 aa7.45□□□□□ -1.22
A1CF-210ENST00000493415 DACT2Q5SW24 774 aa7.45□□□□□ -1.22
A1CF-210ENST00000493415 ZBTB38Q8NAP3 1195 aaPredicted RBP7.45□□□□□ -1.22
A1CF-210ENST00000493415 SP7Q8TDD2 431 aaPredicted RBP7.45□□□□□ -1.22
A1CF-210ENST00000493415 JARID2Q92833 1246 aaPredicted RBP7.45□□□□□ -1.22
A1CF-210ENST00000493415 ZNF333Q96JL9 665 aa7.45□□□□□ -1.22
A1CF-210ENST00000493415 CDC5LQ99459 802 aaKnown RBP7.45□□□□□ -1.22
A1CF-210ENST00000493415 DBF4Q9UBU7 674 aaPredicted RBP7.45□□□□□ -1.22
A1CF-210ENST00000493415 CLRN2A0PK11 232 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 F8W031 263 aaPredicted RBP7.44□□□□□ -1.22
A1CF-210ENST00000493415 MYO1BO43795 1136 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 WDHD1O75717 1129 aaPredicted RBP7.44□□□□□ -1.22
A1CF-210ENST00000493415 KIF22Q14807 665 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 DLGAP5Q15398 846 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 TAF1CQ15572 869 aaPredicted RBP7.44□□□□□ -1.22
A1CF-210ENST00000493415 LDLRAD1Q5T700 205 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 STRIP1Q5VSL9 837 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 TTLL5Q6EMB2 1281 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 SH3TC2Q8TF17 1288 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 DEFB129Q9H1M3 183 aa7.44□□□□□ -1.22
A1CF-210ENST00000493415 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms