RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 LMOD3Q0VAK6 560 aa9.61□□□□□ -0.87
CACUL1-204ENST00000489169 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
CACUL1-204ENST00000489169 TCP11L2Q8N4U5 519 aa9.61□□□□□ -0.87
CACUL1-204ENST00000489169 ZNF592Q92610 1267 aa9.61□□□□□ -0.87
CACUL1-204ENST00000489169 PLEKHF1Q96S99 279 aa9.61□□□□□ -0.87
CACUL1-204ENST00000489169 TSEN34Q9BSV6 310 aaKnown RBP9.61□□□□□ -0.87
CACUL1-204ENST00000489169 IL16Q14005 1332 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 RBM47A0AV96 593 aaKnown RBP9.6□□□□□ -0.87
CACUL1-204ENST00000489169 ERCC3P19447 782 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 CALD1Q05682 793 aaKnown RBP9.6□□□□□ -0.87
CACUL1-204ENST00000489169 PTK7Q13308 1070 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 EIF4A2Q14240 407 aaKnown RBP9.6□□□□□ -0.87
CACUL1-204ENST00000489169 BRINP3Q76B58 766 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 DEFB132Q7Z7B7 95 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 CCDC146Q8IYE0 955 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 IP6K1Q92551 441 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 CLP1Q92989 425 aaKnown RBP9.6□□□□□ -0.87
CACUL1-204ENST00000489169 CDCA7Q9BWT1 371 aaPredicted RBP9.6□□□□□ -0.87
CACUL1-204ENST00000489169 CEP126Q9P2H0 1117 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 MKRN1Q9UHC7 482 aaKnown RBP9.6□□□□□ -0.87
CACUL1-204ENST00000489169 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 KDRP35968 1356 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 PLEKHG2Q9H7P9 1386 aa9.6□□□□□ -0.87
CACUL1-204ENST00000489169 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 SPATA31A3Q5VYP0 1347 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L15C9J2P7 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L10C9JJH3 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L13C9JLJ4 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L12C9JPN9 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L11C9JVI0 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L21D6R901 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L18D6R9N7 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L22D6RA61 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L17D6RBQ6 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L19D6RCP7 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L20D6RJB6 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 GCP02774 474 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 HOXC9P31274 260 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 USP17L24Q0WX57 530 aa9.59□□□□□ -0.87
CACUL1-204ENST00000489169 CRTC2Q53ET0 693 aaPredicted RBP9.59□□□□□ -0.87
CACUL1-204ENST00000489169 IGSF1Q8N6C5 1336 aa9.58□□□□□ -0.88
CACUL1-204ENST00000489169 PPFIA3O75145 1194 aa9.58□□□□□ -0.88
CACUL1-204ENST00000489169 PRKAR2BP31323 418 aa9.58□□□□□ -0.88
CACUL1-204ENST00000489169 TMPOP42166 694 aaKnown RBP9.58□□□□□ -0.88
CACUL1-204ENST00000489169 SLFN5Q08AF3 891 aa9.58□□□□□ -0.88
CACUL1-204ENST00000489169 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
CACUL1-204ENST00000489169 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
CACUL1-204ENST00000489169 Q6ZVU0 165 aa9.58□□□□□ -0.88
CACUL1-204ENST00000489169 ARHGEF25Q86VW2 580 aa9.58□□□□□ -0.88
CACUL1-204ENST00000489169 TRMT2AQ8IZ69 625 aaKnown RBP9.58□□□□□ -0.88
CACUL1-204ENST00000489169 MYH16Q9H6N6 1097 aa9.58□□□□□ -0.88
CACUL1-204ENST00000489169 RNF123Q5XPI4 1314 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 COL16A1Q07092 1604 aaPredicted RBP9.57□□□□□ -0.88
CACUL1-204ENST00000489169 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 CT47B1P0C2W7 299 aaPredicted RBP9.57□□□□□ -0.88
CACUL1-204ENST00000489169 FBLN1P23142 703 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 NFE2L2Q16236 605 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 HSP90AB2PQ58FF8 381 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
CACUL1-204ENST00000489169 FAM200AQ8TCP9 573 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 ARHGAP9Q9BRR9 750 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 CDV3Q9UKY7 258 aaKnown RBP9.57□□□□□ -0.88
CACUL1-204ENST00000489169 CPDO75976 1380 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 LTN1O94822 1766 aa9.57□□□□□ -0.88
CACUL1-204ENST00000489169 IGSF3O75054 1194 aa9.56□□□□□ -0.88
CACUL1-204ENST00000489169 DUSP27Q5VZP5 1158 aa9.56□□□□□ -0.88
CACUL1-204ENST00000489169 NUTM2GQ5VZR2 741 aa9.56□□□□□ -0.88
CACUL1-204ENST00000489169 DNAJC14Q6Y2X3 702 aaPredicted RBP9.56□□□□□ -0.88
CACUL1-204ENST00000489169 DEPDC4Q8N2C3 294 aa9.56□□□□□ -0.88
CACUL1-204ENST00000489169 OCSTAMPQ9BR26 566 aa9.56□□□□□ -0.88
CACUL1-204ENST00000489169 AHDC1Q5TGY3 1603 aaPredicted RBP9.56□□□□□ -0.88
CACUL1-204ENST00000489169 RASA1P20936 1047 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 XPCQ01831 940 aaPredicted RBP9.55□□□□□ -0.88
CACUL1-204ENST00000489169 PTK2Q05397 1052 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 NCOA4Q13772 614 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 SLFNL1Q499Z3 407 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 ANKMY2Q8IV38 441 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 GAS2L2Q8NHY3 880 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 SLC10A4Q96EP9 437 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 KCTD15Q96SI1 283 aaPredicted RBP9.55□□□□□ -0.88
CACUL1-204ENST00000489169 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 RCAN3Q9UKA8 241 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 NCAPD2Q15021 1401 aa9.55□□□□□ -0.88
CACUL1-204ENST00000489169 UNCXA6NJT0 531 aa9.54□□□□□ -0.88
CACUL1-204ENST00000489169 TTLL8A6PVC2 850 aa9.54□□□□□ -0.88
CACUL1-204ENST00000489169 HTATSF1O43719 755 aaKnown RBP9.54□□□□□ -0.88
CACUL1-204ENST00000489169 RIPK4P57078 832 aa9.54□□□□□ -0.88
CACUL1-204ENST00000489169 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.54□□□□□ -0.88
CACUL1-204ENST00000489169 MAP7D1Q3KQU3 841 aa9.54□□□□□ -0.88
CACUL1-204ENST00000489169 SULT6B1Q6IMI4 303 aa9.54□□□□□ -0.88
CACUL1-204ENST00000489169 CRYBG1Q9Y4K1 1723 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 FAM208AQ9UK61 1670 aaKnown RBP9.53□□□□□ -0.88
CACUL1-204ENST00000489169 SPINT1O43278 529 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 HMOX1P09601 288 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 CBLBQ13191 982 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 SWI5Q1ZZU3 235 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 RNF135Q8IUD6 432 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.53□□□□□ -0.88
CACUL1-204ENST00000489169 PLPP7Q8NBV4 271 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms