RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 USP17L4A6NCW7 530 aa8.87□□□□□ -0.99
SF3A3-205ENST00000470585 MANSC4A6NHS7 340 aaPredicted RBP8.87□□□□□ -0.99
SF3A3-205ENST00000470585 ZBTB48P10074 688 aaPredicted RBP8.87□□□□□ -0.99
SF3A3-205ENST00000470585 ATP2B4P23634 1241 aa8.87□□□□□ -0.99
SF3A3-205ENST00000470585 CCDC152Q4G0S7 254 aa8.87□□□□□ -0.99
SF3A3-205ENST00000470585 RBM26Q5T8P6 1007 aaKnown RBP8.87□□□□□ -0.99
SF3A3-205ENST00000470585 USP17L1Q7RTZ2 530 aa8.87□□□□□ -0.99
SF3A3-205ENST00000470585 APOBEC3FQ8IUX4 373 aaKnown RBP8.87□□□□□ -0.99
SF3A3-205ENST00000470585 THUMPD2Q9BTF0 503 aaKnown RBP8.87□□□□□ -0.99
SF3A3-205ENST00000470585 ANKIB1Q9P2G1 1089 aa8.87□□□□□ -0.99
SF3A3-205ENST00000470585 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
SF3A3-205ENST00000470585 MKI67P46013 3256 aaKnown RBP8.87□□□□□ -0.99
SF3A3-205ENST00000470585 MED23Q9ULK4 1368 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 CHL1O00533 1208 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 IRS4O14654 1257 aaPredicted RBP8.86□□□□□ -0.99
SF3A3-205ENST00000470585 RIMBP2O15034 1052 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 UFL1O94874 794 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 TBC1D8O95759 1140 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 PRR29P0C7W0 189 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 MAP3K11Q16584 847 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 DOK7Q18PE1 504 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 LDLRAD1Q5T700 205 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 CCDC191Q8NCU4 936 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 ARMC5Q96C12 935 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 FAM89AQ96GI7 184 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 PPP2R3BQ9Y5P8 575 aa8.86□□□□□ -0.99
SF3A3-205ENST00000470585 PCCAP05165 728 aaPredicted RBP8.85□□□□□ -0.99
SF3A3-205ENST00000470585 RIPK4P57078 832 aa8.85□□□□□ -0.99
SF3A3-205ENST00000470585 AIMP1Q12904 312 aaKnown RBP8.85□□□□□ -0.99
SF3A3-205ENST00000470585 ARHGEF6Q15052 776 aa8.85□□□□□ -0.99
SF3A3-205ENST00000470585 STRIP1Q5VSL9 837 aa8.85□□□□□ -0.99
SF3A3-205ENST00000470585 OTUD7BQ6GQQ9 843 aa8.85□□□□□ -0.99
SF3A3-205ENST00000470585 DLK2Q6UY11 383 aa8.85□□□□□ -0.99
SF3A3-205ENST00000470585 ERO1AQ96HE7 468 aa8.85□□□□□ -0.99
SF3A3-205ENST00000470585 KCNQ5Q9NR82 932 aa8.85□□□□□ -0.99
SF3A3-205ENST00000470585 ASTN2O75129 1339 aaPredicted RBP8.84□□□□□ -0.99
SF3A3-205ENST00000470585 UBE2Q2LH0YL09 131 aa8.84□□□□□ -0.99
SF3A3-205ENST00000470585 WNT10BO00744 389 aa8.84□□□□□ -0.99
SF3A3-205ENST00000470585 PDE8AO60658 829 aa8.84□□□□□ -0.99
SF3A3-205ENST00000470585 HDGFL1Q5TGJ6 251 aa8.84□□□□□ -0.99
SF3A3-205ENST00000470585 SPRYD7Q5W111 196 aa8.84□□□□□ -0.99
SF3A3-205ENST00000470585 ANKRD18AQ8IVF6 992 aa8.84□□□□□ -0.99
SF3A3-205ENST00000470585 CDC5LQ99459 802 aaKnown RBP8.84□□□□□ -0.99
SF3A3-205ENST00000470585 COA1Q9GZY4 146 aa8.84□□□□□ -0.99
SF3A3-205ENST00000470585 CHPF2Q9P2E5 772 aa8.84□□□□□ -0.99
SF3A3-205ENST00000470585 ANXA1P04083 346 aa8.83□□□□□ -1
SF3A3-205ENST00000470585 TMPOP42166 694 aaKnown RBP8.83□□□□□ -1
SF3A3-205ENST00000470585 FXR1P51114 621 aaKnown RBP eCLIP8.83□□□□□ -1
SF3A3-205ENST00000470585 GOLGA2Q08379 1002 aa8.83□□□□□ -1
SF3A3-205ENST00000470585 TTLL12Q14166 644 aaPredicted RBP8.83□□□□□ -1
SF3A3-205ENST00000470585 DACT2Q5SW24 774 aa8.83□□□□□ -1
SF3A3-205ENST00000470585 OTOP1Q7RTM1 612 aa8.83□□□□□ -1
SF3A3-205ENST00000470585 IFNL1Q8IU54 200 aa8.83□□□□□ -1
SF3A3-205ENST00000470585 MTMR14Q8NCE2 650 aa8.83□□□□□ -1
SF3A3-205ENST00000470585 BSDC1Q9NW68 430 aaPredicted RBP8.83□□□□□ -1
SF3A3-205ENST00000470585 PPP1R12BO60237 982 aaPredicted RBP8.82□□□□□ -1
SF3A3-205ENST00000470585 CAPN2P17655 700 aa8.82□□□□□ -1
SF3A3-205ENST00000470585 PTPN12Q05209 780 aaKnown RBP8.82□□□□□ -1
SF3A3-205ENST00000470585 ZBED3Q96IU2 234 aaPredicted RBP8.82□□□□□ -1
SF3A3-205ENST00000470585 PTPN22Q9Y2R2 807 aa8.82□□□□□ -1
SF3A3-205ENST00000470585 LEMD3Q9Y2U8 911 aa8.82□□□□□ -1
SF3A3-205ENST00000470585 TRIM17Q9Y577 477 aa8.82□□□□□ -1
SF3A3-205ENST00000470585 ZNF646O15015 1829 aaPredicted RBP8.82□□□□□ -1
SF3A3-205ENST00000470585 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
SF3A3-205ENST00000470585 CNGB1Q14028 1251 aaPredicted RBP8.81□□□□□ -1
SF3A3-205ENST00000470585 NBPF9Q3BBW0 867 aa8.81□□□□□ -1
SF3A3-205ENST00000470585 SUPT20HL1Q3ZLR7 823 aa8.81□□□□□ -1
SF3A3-205ENST00000470585 NBPF11Q86T75 865 aa8.81□□□□□ -1
SF3A3-205ENST00000470585 SLC10A4Q96EP9 437 aa8.81□□□□□ -1
SF3A3-205ENST00000470585 MYH3P11055 1940 aa8.81□□□□□ -1
SF3A3-205ENST00000470585 COL4A1P02462 1669 aa8.81□□□□□ -1
SF3A3-205ENST00000470585 ECM29Q5VYK3 1845 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 CENPFP49454 3210 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 ATP5J2-PTCD1G3V325 749 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 DDX58O95786 925 aaKnown RBP8.8□□□□□ -1
SF3A3-205ENST00000470585 GNRH1P01148 92 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 FKBP1AP62942 108 aaKnown RBP8.8□□□□□ -1
SF3A3-205ENST00000470585 CALD1Q05682 793 aaKnown RBP8.8□□□□□ -1
SF3A3-205ENST00000470585 MOB2Q70IA6 237 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 TMEM106CQ9BVX2 250 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 EFCC1Q9HA90 598 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 ZCCHC17Q9NP64 241 aaKnown RBP8.8□□□□□ -1
SF3A3-205ENST00000470585 SEC31BQ9NQW1 1179 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 CWC25Q9NXE8 425 aaPredicted RBP8.8□□□□□ -1
SF3A3-205ENST00000470585 ZNF804BA4D1E1 1349 aa8.8□□□□□ -1
SF3A3-205ENST00000470585 POTEFA5A3E0 1075 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 MYO1BO43795 1136 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 IREB2P48200 963 aaKnown RBP8.79□□□□□ -1
SF3A3-205ENST00000470585 CCT4P50991 539 aaKnown RBP8.79□□□□□ -1
SF3A3-205ENST00000470585 PRMT2P55345 433 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 CTSWP56202 376 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 SP3Q02447 781 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 RALBP1Q15311 655 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 C15orf52Q6ZUT6 534 aaKnown RBP8.79□□□□□ -1
SF3A3-205ENST00000470585 WNK4Q96J92 1243 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 ZNF333Q96JL9 665 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 ANKRD2Q9GZV1 360 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 DEFB129Q9H1M3 183 aa8.79□□□□□ -1
SF3A3-205ENST00000470585 ANGEL1Q9UNK9 670 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms