RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 TM4SF4P48230 202 aa15.83■□□□□ 0.12
HDAC4-207ENST00000461113 DOK7Q18PE1 504 aa15.83■□□□□ 0.12
HDAC4-207ENST00000461113 ANGEL2Q5VTE6 544 aaKnown RBP15.83■□□□□ 0.12
HDAC4-207ENST00000461113 SLC4A10Q6U841 1118 aa15.83■□□□□ 0.12
HDAC4-207ENST00000461113 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
HDAC4-207ENST00000461113 API5Q9BZZ5 524 aaKnown RBP15.83■□□□□ 0.12
HDAC4-207ENST00000461113 SH3TC1Q8TE82 1336 aa15.83■□□□□ 0.12
HDAC4-207ENST00000461113 RTL9Q8NET4 1388 aa15.83■□□□□ 0.12
HDAC4-207ENST00000461113 MKI67P46013 3256 aaKnown RBP15.82■□□□□ 0.12
HDAC4-207ENST00000461113 DLL1O00548 723 aa15.82■□□□□ 0.12
HDAC4-207ENST00000461113 ECE2O60344 883 aa15.82■□□□□ 0.12
HDAC4-207ENST00000461113 MKRN3Q13064 507 aaKnown RBP15.82■□□□□ 0.12
HDAC4-207ENST00000461113 SCARF1Q14162 830 aa15.82■□□□□ 0.12
HDAC4-207ENST00000461113 C6orf229H3BNL8 230 aa15.81■□□□□ 0.12
HDAC4-207ENST00000461113 INTS3Q68E01 1043 aaKnown RBP15.81■□□□□ 0.12
HDAC4-207ENST00000461113 LINS1Q8NG48 757 aa15.81■□□□□ 0.12
HDAC4-207ENST00000461113 DUOX1Q9NRD9 1551 aa15.81■□□□□ 0.12
HDAC4-207ENST00000461113 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
HDAC4-207ENST00000461113 NSFL1CQ9UNZ2 370 aaKnown RBP15.81■□□□□ 0.12
HDAC4-207ENST00000461113 F6X3S4 739 aa15.8■□□□□ 0.12
HDAC4-207ENST00000461113 TMC4Q7Z404 712 aa15.8■□□□□ 0.12
HDAC4-207ENST00000461113 ZBTB38Q8NAP3 1195 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-207ENST00000461113 FRAT1Q92837 279 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-207ENST00000461113 POLLQ9UGP5 575 aa15.8■□□□□ 0.12
HDAC4-207ENST00000461113 SCAF8Q9UPN6 1271 aaKnown RBP15.8■□□□□ 0.12
HDAC4-207ENST00000461113 TRIM17Q9Y577 477 aa15.8■□□□□ 0.12
HDAC4-207ENST00000461113 NEURL1BA8MQ27 555 aa15.79■□□□□ 0.12
HDAC4-207ENST00000461113 VIL1P09327 827 aaKnown RBP15.79■□□□□ 0.12
HDAC4-207ENST00000461113 EN2P19622 333 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-207ENST00000461113 ARHGAP45Q92619 1136 aa15.79■□□□□ 0.12
HDAC4-207ENST00000461113 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
HDAC4-207ENST00000461113 SRCIN1Q9C0H9 1055 aa15.79■□□□□ 0.12
HDAC4-207ENST00000461113 NUP98P52948 1817 aa15.79■□□□□ 0.12
HDAC4-207ENST00000461113 ALDH1L1O75891 902 aa15.78■□□□□ 0.12
HDAC4-207ENST00000461113 PCCAP05165 728 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-207ENST00000461113 GPSM2P81274 684 aa15.78■□□□□ 0.12
HDAC4-207ENST00000461113 SREBF2Q12772 1141 aa15.78■□□□□ 0.12
HDAC4-207ENST00000461113 TTLL12Q14166 644 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-207ENST00000461113 PRAMEF18Q5VWM3 479 aa15.78■□□□□ 0.12
HDAC4-207ENST00000461113 FAM89AQ96GI7 184 aa15.78■□□□□ 0.12
HDAC4-207ENST00000461113 C9orf78Q9NZ63 289 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-207ENST00000461113 RCAN3Q9UKA8 241 aa15.78■□□□□ 0.12
HDAC4-207ENST00000461113 IRS4O14654 1257 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-207ENST00000461113 BCAR3O75815 825 aa15.77■□□□□ 0.12
HDAC4-207ENST00000461113 MS4A1P11836 297 aa15.77■□□□□ 0.12
HDAC4-207ENST00000461113 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.12
HDAC4-207ENST00000461113 ZNF280AP59817 542 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-207ENST00000461113 CWF19L2Q2TBE0 894 aaKnown RBP15.77■□□□□ 0.12
HDAC4-207ENST00000461113 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-207ENST00000461113 ZKSCAN2Q63HK3 967 aa15.77■□□□□ 0.12
HDAC4-207ENST00000461113 OTOP1Q7RTM1 612 aa15.77■□□□□ 0.12
HDAC4-207ENST00000461113 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-207ENST00000461113 EYA3Q99504 573 aa15.77■□□□□ 0.12
HDAC4-207ENST00000461113 IGKV5-2P06315 115 aa15.76■□□□□ 0.11
HDAC4-207ENST00000461113 GCKRQ14397 625 aa15.76■□□□□ 0.11
HDAC4-207ENST00000461113 BEND3Q5T5X7 828 aa15.76■□□□□ 0.11
HDAC4-207ENST00000461113 SLC17A8Q8NDX2 589 aa15.76■□□□□ 0.11
HDAC4-207ENST00000461113 HDAC5Q9UQL6 1122 aa15.76■□□□□ 0.11
HDAC4-207ENST00000461113 PAPPA2Q9BXP8 1791 aa15.76■□□□□ 0.11
HDAC4-207ENST00000461113 CACNA1FO60840 1977 aa15.75■□□□□ 0.11
HDAC4-207ENST00000461113 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
HDAC4-207ENST00000461113 FTSJ3Q8IY81 847 aaKnown RBP15.75■□□□□ 0.11
HDAC4-207ENST00000461113 CELF1Q92879 486 aaKnown RBP15.75■□□□□ 0.11
HDAC4-207ENST00000461113 POLR2AP24928 1970 aaKnown RBP15.75■□□□□ 0.11
HDAC4-207ENST00000461113 PITPNM2Q9BZ72 1349 aa15.74■□□□□ 0.11
HDAC4-207ENST00000461113 PDE8AO60658 829 aa15.74■□□□□ 0.11
HDAC4-207ENST00000461113 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
HDAC4-207ENST00000461113 TBC1D16Q8TBP0 767 aa15.74■□□□□ 0.11
HDAC4-207ENST00000461113 MYOZ2Q9NPC6 264 aa15.74■□□□□ 0.11
HDAC4-207ENST00000461113 HTTP42858 3142 aa15.73■□□□□ 0.11
HDAC4-207ENST00000461113 G3V3G9 751 aa15.73■□□□□ 0.11
HDAC4-207ENST00000461113 H7C1W4 665 aa15.73■□□□□ 0.11
HDAC4-207ENST00000461113 GRM8O00222 908 aa15.73■□□□□ 0.11
HDAC4-207ENST00000461113 CCDC152Q4G0S7 254 aa15.73■□□□□ 0.11
HDAC4-207ENST00000461113 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
HDAC4-207ENST00000461113 RSBN1LQ6PCB5 846 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-207ENST00000461113 AGBL3Q8NEM8 1001 aa15.73■□□□□ 0.11
HDAC4-207ENST00000461113 ZC3H12CQ9C0D7 883 aaKnown RBP15.73■□□□□ 0.11
HDAC4-207ENST00000461113 PTPN22Q9Y2R2 807 aa15.73■□□□□ 0.11
HDAC4-207ENST00000461113 H0YGN5 161 aa15.72■□□□□ 0.11
HDAC4-207ENST00000461113 ALDH1A1P00352 501 aa15.72■□□□□ 0.11
HDAC4-207ENST00000461113 USP17L8P0C7I0 530 aa15.72■□□□□ 0.11
HDAC4-207ENST00000461113 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
HDAC4-207ENST00000461113 ARMC5Q96C12 935 aa15.72■□□□□ 0.11
HDAC4-207ENST00000461113 SZT2Q5T011 3432 aa15.71■□□□□ 0.11
HDAC4-207ENST00000461113 PRKG1Q13976 671 aa15.71■□□□□ 0.11
HDAC4-207ENST00000461113 JARID2Q92833 1246 aaPredicted RBP15.71■□□□□ 0.11
HDAC4-207ENST00000461113 OTUD5Q96G74 571 aa15.71■□□□□ 0.11
HDAC4-207ENST00000461113 TRIM27P14373 513 aa15.7■□□□□ 0.1
HDAC4-207ENST00000461113 NF2P35240 595 aa15.7■□□□□ 0.1
HDAC4-207ENST00000461113 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
HDAC4-207ENST00000461113 NBPF9Q3BBW0 867 aa15.7■□□□□ 0.1
HDAC4-207ENST00000461113 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
HDAC4-207ENST00000461113 DZIP1LQ8IYY4 767 aaKnown RBP15.7■□□□□ 0.1
HDAC4-207ENST00000461113 CD99L2Q8TCZ2 262 aa15.7■□□□□ 0.1
HDAC4-207ENST00000461113 CLUAP1Q96AJ1 413 aa15.7■□□□□ 0.1
HDAC4-207ENST00000461113 GMLQ99445 158 aa15.7■□□□□ 0.1
HDAC4-207ENST00000461113 TMEM106CQ9BVX2 250 aa15.7■□□□□ 0.1
HDAC4-207ENST00000461113 CHRDL2Q6WN34 429 aa15.69■□□□□ 0.1
HDAC4-207ENST00000461113 ARMC9Q7Z3E5 817 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms