RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 COL3A1P02461 1466 aaPredicted RBP9.77□□□□□ -0.85
RBM39-218ENST00000449489 UNC80Q8N2C7 3258 aa9.76□□□□□ -0.85
RBM39-218ENST00000449489 LAMB4A4D0S4 1761 aa9.76□□□□□ -0.85
RBM39-218ENST00000449489 ADM5C9JUS6 153 aa9.76□□□□□ -0.85
RBM39-218ENST00000449489 DPYSL4O14531 572 aa9.76□□□□□ -0.85
RBM39-218ENST00000449489 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
RBM39-218ENST00000449489 PDIA6Q15084 440 aa9.76□□□□□ -0.85
RBM39-218ENST00000449489 TBC1D10BQ4KMP7 808 aaPredicted RBP9.76□□□□□ -0.85
RBM39-218ENST00000449489 KIF6Q6ZMV9 814 aa9.76□□□□□ -0.85
RBM39-218ENST00000449489 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.76□□□□□ -0.85
RBM39-218ENST00000449489 PAPPA2Q9BXP8 1791 aa9.75□□□□□ -0.85
RBM39-218ENST00000449489 PSMD14O00487 310 aa9.75□□□□□ -0.85
RBM39-218ENST00000449489 TBC1D8O95759 1140 aa9.75□□□□□ -0.85
RBM39-218ENST00000449489 EGFRP00533 1210 aa9.75□□□□□ -0.85
RBM39-218ENST00000449489 GPTP24298 496 aa9.75□□□□□ -0.85
RBM39-218ENST00000449489 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
RBM39-218ENST00000449489 TAF7Q15545 349 aaPredicted RBP9.75□□□□□ -0.85
RBM39-218ENST00000449489 RTF1Q92541 710 aaKnown RBP9.75□□□□□ -0.85
RBM39-218ENST00000449489 CDCA5Q96FF9 252 aa9.75□□□□□ -0.85
RBM39-218ENST00000449489 PHACTR3Q96KR7 559 aa9.75□□□□□ -0.85
RBM39-218ENST00000449489 ZNF609O15014 1411 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
RBM39-218ENST00000449489 U2SURPO15042 1029 aaKnown RBP9.74□□□□□ -0.85
RBM39-218ENST00000449489 FKTNO75072 461 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 GRAPQ13588 217 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 TTLL7Q6ZT98 887 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 GRAPLQ8TC17 118 aaPredicted RBP9.74□□□□□ -0.85
RBM39-218ENST00000449489 UTP14AQ9BVJ6 771 aaKnown RBP9.74□□□□□ -0.85
RBM39-218ENST00000449489 EMILIN3Q9NT22 766 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 ERBB4Q15303 1308 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 PITPNM2Q9BZ72 1349 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 VCANP13611 3396 aa9.74□□□□□ -0.85
RBM39-218ENST00000449489 LRRC37AA6NMS7 1700 aa9.73□□□□□ -0.85
RBM39-218ENST00000449489 SNPHO15079 494 aa9.73□□□□□ -0.85
RBM39-218ENST00000449489 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
RBM39-218ENST00000449489 ST18O60284 1047 aa9.73□□□□□ -0.85
RBM39-218ENST00000449489 TBC1D12O60347 775 aa9.73□□□□□ -0.85
RBM39-218ENST00000449489 VIL1P09327 827 aaKnown RBP9.73□□□□□ -0.85
RBM39-218ENST00000449489 SREBF2Q12772 1141 aa9.73□□□□□ -0.85
RBM39-218ENST00000449489 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
RBM39-218ENST00000449489 DDX46Q7L014 1031 aaKnown RBP9.73□□□□□ -0.85
RBM39-218ENST00000449489 PNISRQ8TF01 805 aaKnown RBP9.73□□□□□ -0.85
RBM39-218ENST00000449489 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
RBM39-218ENST00000449489 GGA3Q9NZ52 723 aa9.73□□□□□ -0.85
RBM39-218ENST00000449489 ALDH1A1P00352 501 aa9.72□□□□□ -0.85
RBM39-218ENST00000449489 HSPA5P11021 654 aaKnown RBP9.72□□□□□ -0.85
RBM39-218ENST00000449489 PRKAR2BP31323 418 aa9.72□□□□□ -0.85
RBM39-218ENST00000449489 ZNF280AP59817 542 aaPredicted RBP9.72□□□□□ -0.85
RBM39-218ENST00000449489 MCM10Q7L590 875 aa9.72□□□□□ -0.85
RBM39-218ENST00000449489 CDAN1Q8IWY9 1227 aa9.72□□□□□ -0.85
RBM39-218ENST00000449489 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
RBM39-218ENST00000449489 DDX60Q8IY21 1712 aaKnown RBP9.72□□□□□ -0.85
RBM39-218ENST00000449489 LAMB2P55268 1798 aa9.72□□□□□ -0.85
RBM39-218ENST00000449489 DLL1O00548 723 aa9.71□□□□□ -0.86
RBM39-218ENST00000449489 INHBEP58166 350 aa9.71□□□□□ -0.86
RBM39-218ENST00000449489 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
RBM39-218ENST00000449489 NGEFQ8N5V2 710 aa9.71□□□□□ -0.86
RBM39-218ENST00000449489 AGBL3Q8NEM8 1001 aa9.71□□□□□ -0.86
RBM39-218ENST00000449489 ARMC5Q96C12 935 aa9.71□□□□□ -0.86
RBM39-218ENST00000449489 EYA3Q99504 573 aa9.71□□□□□ -0.86
RBM39-218ENST00000449489 RRP7AQ9Y3A4 280 aaKnown RBP9.71□□□□□ -0.86
RBM39-218ENST00000449489 RTL9Q8NET4 1388 aa9.71□□□□□ -0.86
RBM39-218ENST00000449489 SCN9AQ15858 1988 aa9.7□□□□□ -0.86
RBM39-218ENST00000449489 ECE2O60344 883 aa9.7□□□□□ -0.86
RBM39-218ENST00000449489 SCARF1Q14162 830 aa9.7□□□□□ -0.86
RBM39-218ENST00000449489 HSP90AB3PQ58FF7 597 aa9.7□□□□□ -0.86
RBM39-218ENST00000449489 LRP10Q7Z4F1 713 aa9.7□□□□□ -0.86
RBM39-218ENST00000449489 DBNDD1Q9H9R9 158 aa9.7□□□□□ -0.86
RBM39-218ENST00000449489 MYL6BP14649 208 aa9.69□□□□□ -0.86
RBM39-218ENST00000449489 TAF1P21675 1872 aa9.69□□□□□ -0.86
RBM39-218ENST00000449489 EIF4A1P60842 406 aaKnown RBP9.69□□□□□ -0.86
RBM39-218ENST00000449489 ANGEL2Q5VTE6 544 aaKnown RBP9.69□□□□□ -0.86
RBM39-218ENST00000449489 KDM3BQ7LBC6 1761 aa9.69□□□□□ -0.86
RBM39-218ENST00000449489 OTOP1Q7RTM1 612 aa9.69□□□□□ -0.86
RBM39-218ENST00000449489 POLLQ9UGP5 575 aa9.69□□□□□ -0.86
RBM39-218ENST00000449489 NSFL1CQ9UNZ2 370 aaKnown RBP9.69□□□□□ -0.86
RBM39-218ENST00000449489 PSME4Q14997 1843 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 ASTN2O75129 1339 aaPredicted RBP9.68□□□□□ -0.86
RBM39-218ENST00000449489 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 UBE2Q2LH0YL09 131 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 HCLS1P14317 486 aaPredicted RBP9.68□□□□□ -0.86
RBM39-218ENST00000449489 MMP14P50281 582 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 SF3B3Q15393 1217 aaKnown RBP9.68□□□□□ -0.86
RBM39-218ENST00000449489 NLRP10Q86W26 655 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 GMLQ99445 158 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 R3HDMLQ9H3Y0 253 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 KCNQ5Q9NR82 932 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 PODXL2Q9NZ53 605 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 NUDCQ9Y266 331 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 PTPN22Q9Y2R2 807 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 TRIM17Q9Y577 477 aa9.68□□□□□ -0.86
RBM39-218ENST00000449489 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 EN2P19622 333 aaPredicted RBP9.67□□□□□ -0.86
RBM39-218ENST00000449489 DCTN1Q14203 1278 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 CC2D1BQ5T0F9 858 aaKnown RBP9.67□□□□□ -0.86
RBM39-218ENST00000449489 RSBN1LQ6PCB5 846 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms