RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 GTF2F1P35269 517 aaKnown RBP eCLIP9.18□□□□□ -0.94
RIF1-205ENST00000444746 IL15P40933 162 aaPredicted RBP9.18□□□□□ -0.94
RIF1-205ENST00000444746 SNW1Q13573 536 aaKnown RBP9.18□□□□□ -0.94
RIF1-205ENST00000444746 KLHL40Q2TBA0 621 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 CEP135Q66GS9 1140 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 MAEAQ7L5Y9 396 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 RAPGEF6Q8TEU7 1601 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 ERLIN2O94905 339 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 LINS1Q8NG48 757 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 RBSNQ9H1K0 784 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 DCAF8L1A6NGE4 600 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 BAG3O95817 575 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 PTPN21Q16825 1174 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 RUFY3Q7L099 469 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 BICD1Q96G01 975 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 TCP11L1Q9NUJ3 509 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 NPHP3Q7Z494 1330 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 JAK2O60674 1132 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 STAT6P42226 847 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 PHKBQ93100 1093 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 DNAI1Q9UI46 699 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 TTC21AQ8NDW8 1320 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 ALDH1L1O75891 902 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 FAM47AQ5JRC9 791 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 ZNF287Q9HBT7 754 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 JADE2Q9NQC1 790 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 GJA3Q9Y6H8 435 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 CHMP2AO43633 222 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 COBLO75128 1261 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 KIF20AO95235 890 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 IP6K1Q92551 441 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 XAGE2Q96GT9 111 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 SLC27A2O14975 620 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 ERLIN1O75477 346 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 YEATS4O95619 227 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 PLEKHA4Q9H4M7 779 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 POLR3AO14802 1390 aaPredicted RBP9.17□□□□□ -0.94
RIF1-205ENST00000444746 FLT4P35916 1363 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 ZAP70P43403 619 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 TNIP1Q15025 636 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 ZNF790Q6PG37 636 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 TEX13AQ9BXU3 409 aaPredicted RBP9.17□□□□□ -0.94
RIF1-205ENST00000444746 ASIC1P78348 528 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 TCP10Q12799 353 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 TNNI3KQ59H18 835 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 FPGT-TNNI3KV9GXZ4 949 aa9.17□□□□□ -0.94
RIF1-205ENST00000444746 HLTFQ14527 1009 aaKnown RBP eCLIP9.16□□□□□ -0.944e-7■■□□□ 14.4
RIF1-205ENST00000444746 KIF18AQ8NI77 898 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 KCNJ14Q9UNX9 436 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 SYT1P21579 422 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 MRPS27Q92552 414 aaKnown RBP9.16□□□□□ -0.94
RIF1-205ENST00000444746 EXOC1Q9NV70 894 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 AATFQ9NY61 560 aaKnown RBP eCLIP9.16□□□□□ -0.94
RIF1-205ENST00000444746 LTKP29376 864 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 UBE4AQ14139 1066 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 LZTFL1Q9NQ48 299 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 MYO6Q9UM54 1294 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 SOS1Q07889 1333 aaPredicted RBP9.16□□□□□ -0.94
RIF1-205ENST00000444746 SKILP12757 684 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 RAD51AP2Q09MP3 1159 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 PZPP20742 1482 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 YTHDC2Q9H6S0 1430 aaKnown RBP9.16□□□□□ -0.94
RIF1-205ENST00000444746 HLA-DOAP06340 250 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 RAB3GAP1Q15042 981 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 TTLL7Q6ZT98 887 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 DDX39AO00148 427 aaKnown RBP9.16□□□□□ -0.94
RIF1-205ENST00000444746 PKP1Q13835 747 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 ESR2Q92731 530 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 IFNKQ9P0W0 207 aa9.16□□□□□ -0.94
RIF1-205ENST00000444746 RTL1A6NKG5 1358 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 ZSCAN12O43309 604 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 RBM25P49756 843 aaKnown RBP9.15□□□□□ -0.94
RIF1-205ENST00000444746 ZNF496Q96IT1 587 aaPredicted RBP9.15□□□□□ -0.94
RIF1-205ENST00000444746 VWA3AA6NCI4 1184 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 RNASE9P60153 205 aaKnown RBP9.15□□□□□ -0.94
RIF1-205ENST00000444746 KIF5BP33176 963 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 CA8P35219 290 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 CCT6AP40227 531 aaKnown RBP9.15□□□□□ -0.94
RIF1-205ENST00000444746 JAKMIP3Q5VZ66 844 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 RTCBQ9Y3I0 505 aaKnown RBP9.15□□□□□ -0.94
RIF1-205ENST00000444746 SPTLC2O15270 562 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 UFL1O94874 794 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 LDHCP07864 332 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 TYRO3Q06418 890 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 SF3A3Q12874 501 aaKnown RBP eCLIP9.15□□□□□ -0.94
RIF1-205ENST00000444746 PROSER3Q2NL68 480 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 RNF187Q5TA31 235 aaPredicted RBP9.15□□□□□ -0.94
RIF1-205ENST00000444746 HMG20BQ9P0W2 317 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 SERPINA10Q9UK55 444 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 PALD1Q9ULE6 856 aa9.15□□□□□ -0.94
RIF1-205ENST00000444746 LETM2Q2VYF4 491 aa9.15□□□□□ -0.95
RIF1-205ENST00000444746 LUC7LQ9NQ29 371 aaKnown RBP9.15□□□□□ -0.95
RIF1-205ENST00000444746 SMIM23A6NLE4 172 aa9.15□□□□□ -0.95
RIF1-205ENST00000444746 PTH1RQ03431 593 aa9.15□□□□□ -0.95
RIF1-205ENST00000444746 PIK3AP1Q6ZUJ8 805 aa9.15□□□□□ -0.95
RIF1-205ENST00000444746 FCHSD1Q86WN1 690 aa9.15□□□□□ -0.95
RIF1-205ENST00000444746 KRT23Q9C075 422 aa9.15□□□□□ -0.95
RIF1-205ENST00000444746 TBC1D7Q9P0N9 293 aa9.15□□□□□ -0.95
RIF1-205ENST00000444746 HARSP12081 509 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms