RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CTNNA3Q9UI47 895 aa12.36□□□□□ -0.43
CPNE1-218ENST00000439806 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
CPNE1-218ENST00000439806 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
CPNE1-218ENST00000439806 BCORQ6W2J9 1755 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 ZAP70P43403 619 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 KRT85P78386 507 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 DNM1Q05193 864 aaKnown RBP12.35□□□□□ -0.43
CPNE1-218ENST00000439806 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 APPBP2Q92624 585 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 BRF1Q92994 677 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.35□□□□□ -0.436e-7■■■■■ 30.8
CPNE1-218ENST00000439806 RRAGDQ9NQL2 400 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-218ENST00000439806 RIPOR2Q9Y4F9 1068 aa12.35□□□□□ -0.43
CPNE1-218ENST00000439806 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-218ENST00000439806 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-218ENST00000439806 DTNBO60941 627 aa12.34□□□□□ -0.43
CPNE1-218ENST00000439806 ATP6V1AP38606 617 aa12.34□□□□□ -0.43
CPNE1-218ENST00000439806 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-218ENST00000439806 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-218ENST00000439806 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
CPNE1-218ENST00000439806 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-218ENST00000439806 FAM184AQ8NB25 1140 aa12.34□□□□□ -0.43
CPNE1-218ENST00000439806 AK7Q96M32 723 aa12.34□□□□□ -0.43
CPNE1-218ENST00000439806 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
CPNE1-218ENST00000439806 COL5A3P25940 1745 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-218ENST00000439806 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 E7EWF7 191 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 UQCRFS1P1P0C7P4 283 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 CRKLP46109 303 aaKnown RBP12.33□□□□□ -0.44
CPNE1-218ENST00000439806 SCARF1Q14162 830 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 IMMTQ16891 758 aaKnown RBP12.33□□□□□ -0.44
CPNE1-218ENST00000439806 OSBP2Q969R2 916 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
CPNE1-218ENST00000439806 UTP14AQ9BVJ6 771 aaKnown RBP12.33□□□□□ -0.44
CPNE1-218ENST00000439806 LRRC2Q9BYS8 371 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 NAP1L2Q9ULW6 460 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-218ENST00000439806 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 CHD4Q14839 1912 aa12.33□□□□□ -0.44
CPNE1-218ENST00000439806 H3BQV1 296 aa12.32□□□□□ -0.44
CPNE1-218ENST00000439806 PFKFB2O60825 505 aa12.32□□□□□ -0.44
CPNE1-218ENST00000439806 SLC5A1P13866 664 aa12.32□□□□□ -0.44
CPNE1-218ENST00000439806 EIF5P55010 431 aaKnown RBP12.32□□□□□ -0.44
CPNE1-218ENST00000439806 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
CPNE1-218ENST00000439806 IFFO2Q5TF58 517 aa12.32□□□□□ -0.44
CPNE1-218ENST00000439806 INTS5Q6P9B9 1019 aaKnown RBP12.32□□□□□ -0.44
CPNE1-218ENST00000439806 FERMT3Q86UX7 667 aa12.32□□□□□ -0.44
CPNE1-218ENST00000439806 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-218ENST00000439806 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-218ENST00000439806 CASZ1Q86V15 1759 aa12.32□□□□□ -0.44
CPNE1-218ENST00000439806 MYH14Q7Z406 1995 aaKnown RBP12.32□□□□□ -0.44
CPNE1-218ENST00000439806 SLIT2O94813 1529 aa12.32□□□□□ -0.44
CPNE1-218ENST00000439806 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 ESPNB1AK53 854 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 JAK2O60674 1132 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 PDE8BO95263 885 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 MCAMP43121 646 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 SIK1P57059 783 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 HMGN5P82970 282 aaKnown RBP12.31□□□□□ -0.44
CPNE1-218ENST00000439806 EXOSC10Q01780 885 aaKnown RBP12.31□□□□□ -0.44
CPNE1-218ENST00000439806 APOBRQ0VD83 1088 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 SCRN1Q12765 414 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 PUM3Q15397 648 aaKnown RBP12.31□□□□□ -0.44
CPNE1-218ENST00000439806 SUSD4Q5VX71 490 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-218ENST00000439806 ZNF831Q5JPB2 1677 aa12.31□□□□□ -0.44
CPNE1-218ENST00000439806 ATRNO75882 1429 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 GOLGA6L4A6NEF3 574 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 GPAA1O43292 621 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 ARID4AP29374 1257 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-218ENST00000439806 ADD2P35612 726 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 PI16Q6UXB8 463 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 VGLL2Q8N8G2 317 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 LPIN2Q92539 896 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 DDX11Q96FC9 970 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 MPHOSPH8Q99549 860 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 SCAND2PQ9GZW5 306 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-218ENST00000439806 ELP1O95163 1332 aa12.3□□□□□ -0.44
CPNE1-218ENST00000439806 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 A0A0G2JLW4 131 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 HCLS1P14317 486 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-218ENST00000439806 CLCN1P35523 988 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
CPNE1-218ENST00000439806 HAND2P61296 217 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 RESTQ13127 1097 aa12.29□□□□□ -0.44
CPNE1-218ENST00000439806 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms