RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ALKBH2Q6NS38 261 aa8.3□□□□□ -1.08
CLK1-203ENST00000409769 AGGF1Q8N302 714 aaeCLIP8.3□□□□□ -1.08
CLK1-203ENST00000409769 OSGEPQ9NPF4 335 aa8.3□□□□□ -1.08
CLK1-203ENST00000409769 SEC31BQ9NQW1 1179 aa8.3□□□□□ -1.08
CLK1-203ENST00000409769 H3BRJ5 948 aa8.29□□□□□ -1.08
CLK1-203ENST00000409769 PIP4K2BP78356 416 aa8.29□□□□□ -1.08
CLK1-203ENST00000409769 NOM1Q5C9Z4 860 aaKnown RBP8.29□□□□□ -1.08
CLK1-203ENST00000409769 TMEM63CQ9P1W3 806 aa8.29□□□□□ -1.08
CLK1-203ENST00000409769 SLAIN2Q9P270 581 aa8.29□□□□□ -1.08
CLK1-203ENST00000409769 STOML1Q9UBI4 398 aa8.29□□□□□ -1.08
CLK1-203ENST00000409769 SEPT3Q9UH03 358 aa8.29□□□□□ -1.08
CLK1-203ENST00000409769 SALL4Q9UJQ4 1053 aa8.29□□□□□ -1.08
CLK1-203ENST00000409769 IGLV1-40P01703 118 aa8.28□□□□□ -1.08
CLK1-203ENST00000409769 CYP2E1P05181 493 aaPredicted RBP8.28□□□□□ -1.08
CLK1-203ENST00000409769 CES1P23141 567 aa8.28□□□□□ -1.08
CLK1-203ENST00000409769 MZF1P28698 734 aaPredicted RBP8.28□□□□□ -1.08
CLK1-203ENST00000409769 DUOXA2Q1HG44 320 aa8.28□□□□□ -1.08
CLK1-203ENST00000409769 TXNDC11Q6PKC3 985 aa8.28□□□□□ -1.08
CLK1-203ENST00000409769 EDEM1Q92611 657 aa8.28□□□□□ -1.08
CLK1-203ENST00000409769 UBL7Q96S82 380 aaPredicted RBP8.28□□□□□ -1.08
CLK1-203ENST00000409769 POP1Q99575 1024 aaKnown RBP8.28□□□□□ -1.08
CLK1-203ENST00000409769 PCMTD2Q9NV79 361 aa8.28□□□□□ -1.08
CLK1-203ENST00000409769 TM4SF5O14894 197 aa8.27□□□□□ -1.09
CLK1-203ENST00000409769 EPHA1P21709 976 aa8.27□□□□□ -1.09
CLK1-203ENST00000409769 UTP4Q969X6 686 aaKnown RBP8.27□□□□□ -1.09
CLK1-203ENST00000409769 ARID3AQ99856 593 aa8.27□□□□□ -1.09
CLK1-203ENST00000409769 MTMR7Q9Y216 660 aa8.27□□□□□ -1.09
CLK1-203ENST00000409769 TMEM88BA6NKF7 163 aa8.26□□□□□ -1.09
CLK1-203ENST00000409769 WISP1O95388 367 aa8.26□□□□□ -1.09
CLK1-203ENST00000409769 PDGFAP04085 211 aa8.26□□□□□ -1.09
CLK1-203ENST00000409769 DNM1Q05193 864 aaKnown RBP8.26□□□□□ -1.09
CLK1-203ENST00000409769 EHHADHQ08426 723 aa8.26□□□□□ -1.09
CLK1-203ENST00000409769 FAM46AQ96IP4 442 aaKnown RBP8.26□□□□□ -1.09
CLK1-203ENST00000409769 USTQ9Y2C2 406 aa8.26□□□□□ -1.09
CLK1-203ENST00000409769 CD97P48960 835 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 ARL4DP49703 201 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 ANKRD34AQ69YU3 496 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 ATCAYQ86WG3 371 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 ARMC10Q8N2F6 343 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 CARD10Q9BWT7 1032 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 RNF208Q9H0X6 261 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 SH2B1Q9NRF2 756 aaPredicted RBP8.25□□□□□ -1.09
CLK1-203ENST00000409769 DZANK1Q9NVP4 752 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 CNTN3Q9P232 1028 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 KANSL3Q9P2N6 904 aa8.25□□□□□ -1.09
CLK1-203ENST00000409769 PDE2AO00408 941 aaPredicted RBP8.24□□□□□ -1.09
CLK1-203ENST00000409769 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
CLK1-203ENST00000409769 USP5P45974 858 aa8.24□□□□□ -1.09
CLK1-203ENST00000409769 EIF1AXP47813 144 aaKnown RBP8.24□□□□□ -1.09
CLK1-203ENST00000409769 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
CLK1-203ENST00000409769 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
CLK1-203ENST00000409769 MYRFLQ96LU7 910 aa8.24□□□□□ -1.09
CLK1-203ENST00000409769 KCNK4Q9NYG8 393 aa8.24□□□□□ -1.09
CLK1-203ENST00000409769 HIF3AQ9Y2N7 669 aa8.24□□□□□ -1.09
CLK1-203ENST00000409769 NFKBIEO00221 500 aa8.23□□□□□ -1.09
CLK1-203ENST00000409769 SART1O43290 800 aaKnown RBP8.23□□□□□ -1.09
CLK1-203ENST00000409769 COBLO75128 1261 aa8.23□□□□□ -1.09
CLK1-203ENST00000409769 CDC25BP30305 580 aa8.23□□□□□ -1.09
CLK1-203ENST00000409769 NFIAQ12857 509 aa8.23□□□□□ -1.09
CLK1-203ENST00000409769 C8orf34Q49A92 452 aa8.23□□□□□ -1.09
CLK1-203ENST00000409769 INTS5Q6P9B9 1019 aaKnown RBP8.23□□□□□ -1.09
CLK1-203ENST00000409769 TMEM102Q8N9M5 508 aaPredicted RBP8.23□□□□□ -1.09
CLK1-203ENST00000409769 FOXD4L4Q8WXT5 416 aaPredicted RBP8.23□□□□□ -1.09
CLK1-203ENST00000409769 KLHDC7BQ96G42 594 aa8.23□□□□□ -1.09
CLK1-203ENST00000409769 FAM13AO94988 1023 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 EDN3P14138 238 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 NPR3P17342 541 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 MPSTP25325 297 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 SSFA2P28290 1259 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 GRIK1P39086 918 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 PDE4CQ08493 712 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 ADAMTSL4Q6UY14 1074 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 GTF3C2Q8WUA4 911 aaPredicted RBP8.22□□□□□ -1.09
CLK1-203ENST00000409769 DBNDD2Q9BQY9 259 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 GGNBP2Q9H3C7 697 aa8.22□□□□□ -1.09
CLK1-203ENST00000409769 ADAM11O75078 769 aa8.21□□□□□ -1.1
CLK1-203ENST00000409769 RNF43Q68DV7 783 aa8.21□□□□□ -1.1
CLK1-203ENST00000409769 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.21□□□□□ -1.1
CLK1-203ENST00000409769 SNX29Q8TEQ0 813 aa8.21□□□□□ -1.1
CLK1-203ENST00000409769 CHRDQ9H2X0 955 aa8.21□□□□□ -1.1
CLK1-203ENST00000409769 SOX13Q9UN79 622 aa8.21□□□□□ -1.1
CLK1-203ENST00000409769 KIAA1324LA8MWY0 1029 aaPredicted RBP8.2□□□□□ -1.1
CLK1-203ENST00000409769 SSTR4P31391 388 aa8.2□□□□□ -1.1
CLK1-203ENST00000409769 C19orf57Q0VDD7 668 aa8.2□□□□□ -1.1
CLK1-203ENST00000409769 SF3B2Q13435 895 aaKnown RBP8.2□□□□□ -1.1
CLK1-203ENST00000409769 FDX2Q6P4F2 183 aa8.2□□□□□ -1.1
CLK1-203ENST00000409769 UBASH3BQ8TF42 649 aa8.2□□□□□ -1.1
CLK1-203ENST00000409769 BSNDQ8WZ55 320 aa8.2□□□□□ -1.1
CLK1-203ENST00000409769 FAM83CQ9BQN1 747 aa8.2□□□□□ -1.1
CLK1-203ENST00000409769 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
CLK1-203ENST00000409769 C7orf69Q9H7B7 122 aa8.2□□□□□ -1.1
CLK1-203ENST00000409769 MEGF11A6BM72 1044 aa8.19□□□□□ -1.1
CLK1-203ENST00000409769 DDX3YO15523 660 aaKnown RBP8.19□□□□□ -1.1
CLK1-203ENST00000409769 PHACTR2O75167 634 aa8.19□□□□□ -1.1
CLK1-203ENST00000409769 ZDHHC13Q8IUH4 622 aa8.19□□□□□ -1.1
CLK1-203ENST00000409769 FAM20CQ8IXL6 584 aa8.19□□□□□ -1.1
CLK1-203ENST00000409769 OSMRQ99650 979 aa8.19□□□□□ -1.1
CLK1-203ENST00000409769 RUSC1Q9BVN2 902 aa8.19□□□□□ -1.1
CLK1-203ENST00000409769 SOX17Q9H6I2 414 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms