RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 GIGYF2Q6Y7W6 1299 aaKnown RBP18.3■□□□□ 0.52
CPSF7-202ENST00000394888 XAGE2Q96GT9 111 aa18.3■□□□□ 0.52
CPSF7-202ENST00000394888 GPHNQ9NQX3 736 aaPredicted RBP18.3■□□□□ 0.52
CPSF7-202ENST00000394888 SCN7AQ01118 1682 aa18.3■□□□□ 0.52
CPSF7-202ENST00000394888 VPS37CA5D8V6 355 aaPredicted RBP18.29■□□□□ 0.52
CPSF7-202ENST00000394888 TTLL11Q8NHH1 800 aa18.29■□□□□ 0.52
CPSF7-202ENST00000394888 BTG4Q9NY30 223 aa18.29■□□□□ 0.52
CPSF7-202ENST00000394888 TMOD3Q9NYL9 352 aa18.29■□□□□ 0.52
CPSF7-202ENST00000394888 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
CPSF7-202ENST00000394888 RNF113AO15541 343 aaKnown RBP18.29■□□□□ 0.52
CPSF7-202ENST00000394888 FDPSP14324 419 aaKnown RBP18.29■□□□□ 0.52
CPSF7-202ENST00000394888 ZKSCAN5Q9Y2L8 839 aa18.29■□□□□ 0.52
CPSF7-202ENST00000394888 ABCC12Q96J65 1359 aa18.29■□□□□ 0.52
CPSF7-202ENST00000394888 KCNJ4P48050 445 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 KRT32Q14532 448 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 NEUROD6Q96NK8 337 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 CHMP3Q9Y3E7 222 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 LEO1Q8WVC0 666 aaPredicted RBP18.28■□□□□ 0.52
CPSF7-202ENST00000394888 BRF1Q92994 677 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
CPSF7-202ENST00000394888 GREM2Q9H772 168 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 DENND2AQ9ULE3 1009 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 LTBP4Q8N2S1 1624 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 MCAMP43121 646 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 ANTXR2P58335 489 aa18.28■□□□□ 0.52
CPSF7-202ENST00000394888 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
CPSF7-202ENST00000394888 DDX11Q96FC9 970 aa18.27■□□□□ 0.52
CPSF7-202ENST00000394888 APOBRQ0VD83 1088 aa18.27■□□□□ 0.51
CPSF7-202ENST00000394888 DHX32Q7L7V1 743 aaKnown RBP18.27■□□□□ 0.51
CPSF7-202ENST00000394888 TRIM44Q96DX7 344 aaPredicted RBP18.27■□□□□ 0.51
CPSF7-202ENST00000394888 HPS5Q9UPZ3 1129 aa18.27■□□□□ 0.51
CPSF7-202ENST00000394888 ZBTB1Q9Y2K1 713 aa18.27■□□□□ 0.51
CPSF7-202ENST00000394888 NEDD4P46934 1319 aa18.26■□□□□ 0.51
CPSF7-202ENST00000394888 OFD1O75665 1012 aa18.26■□□□□ 0.51
CPSF7-202ENST00000394888 IFIT1P09914 478 aaKnown RBP18.26■□□□□ 0.51
CPSF7-202ENST00000394888 TACC3Q9Y6A5 838 aa18.26■□□□□ 0.51
CPSF7-202ENST00000394888 ZAP70P43403 619 aa18.26■□□□□ 0.51
CPSF7-202ENST00000394888 FTOQ9C0B1 505 aaKnown RBP eCLIP18.26■□□□□ 0.51
CPSF7-202ENST00000394888 MRVI1Q9Y6F6 885 aa18.26■□□□□ 0.51
CPSF7-202ENST00000394888 CACNA1SQ13698 1873 aa18.26■□□□□ 0.51
CPSF7-202ENST00000394888 DLEC1Q9Y238 1755 aa18.25■□□□□ 0.51
CPSF7-202ENST00000394888 PDIA3P30101 505 aaKnown RBP18.25■□□□□ 0.51
CPSF7-202ENST00000394888 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
CPSF7-202ENST00000394888 TCRBV5S4A2TA0A5A2 114 aa18.25■□□□□ 0.51
CPSF7-202ENST00000394888 SYAP1Q96A49 352 aaPredicted RBP18.25■□□□□ 0.51
CPSF7-202ENST00000394888 UVSSAQ2YD98 709 aa18.25■□□□□ 0.51
CPSF7-202ENST00000394888 MB21D2Q8IYB1 491 aaPredicted RBP18.25■□□□□ 0.51
CPSF7-202ENST00000394888 NCOA5Q9HCD5 579 aaKnown RBP18.25■□□□□ 0.51
CPSF7-202ENST00000394888 CHST3Q7LGC8 479 aa18.24■□□□□ 0.51
CPSF7-202ENST00000394888 TFIP11Q9UBB9 837 aaKnown RBP18.24■□□□□ 0.51
CPSF7-202ENST00000394888 ATP6V1DQ9Y5K8 247 aa18.24■□□□□ 0.51
CPSF7-202ENST00000394888 FGFR2P21802 821 aa18.24■□□□□ 0.51
CPSF7-202ENST00000394888 HSP90AB3PQ58FF7 597 aa18.24■□□□□ 0.51
CPSF7-202ENST00000394888 ZNF512BQ96KM6 892 aaPredicted RBP18.24■□□□□ 0.51
CPSF7-202ENST00000394888 COL24A1Q17RW2 1714 aa18.24■□□□□ 0.51
CPSF7-202ENST00000394888 ZNF34Q8IZ26 560 aa18.24■□□□□ 0.51
CPSF7-202ENST00000394888 USP25Q9UHP3 1055 aa18.24■□□□□ 0.51
CPSF7-202ENST00000394888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.511e-7■□□□□ 8.3
CPSF7-202ENST00000394888 INTS5Q6P9B9 1019 aaKnown RBP18.23■□□□□ 0.51
CPSF7-202ENST00000394888 NR1I2O75469 434 aa18.23■□□□□ 0.51
CPSF7-202ENST00000394888 CTSWP56202 376 aa18.23■□□□□ 0.51
CPSF7-202ENST00000394888 LLPHQ9BRT6 129 aaKnown RBP18.23■□□□□ 0.51
CPSF7-202ENST00000394888 SBF2Q86WG5 1849 aa18.22■□□□□ 0.51
CPSF7-202ENST00000394888 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
CPSF7-202ENST00000394888 PHF14O94880 888 aa18.22■□□□□ 0.51
CPSF7-202ENST00000394888 FGAP02671 866 aa18.22■□□□□ 0.51
CPSF7-202ENST00000394888 ITGA6P23229 1130 aa18.22■□□□□ 0.51
CPSF7-202ENST00000394888 KCNF1Q9H3M0 494 aa18.22■□□□□ 0.51
CPSF7-202ENST00000394888 PIH1D3Q9NQM4 214 aaKnown RBP18.22■□□□□ 0.51
CPSF7-202ENST00000394888 KDM4AO75164 1064 aa18.21■□□□□ 0.51
CPSF7-202ENST00000394888 FAM184AQ8NB25 1140 aa18.21■□□□□ 0.51
CPSF7-202ENST00000394888 CARMIL3Q8ND23 1372 aa18.21■□□□□ 0.51
CPSF7-202ENST00000394888 KRT85P78386 507 aa18.21■□□□□ 0.51
CPSF7-202ENST00000394888 SNW1Q13573 536 aaKnown RBP18.21■□□□□ 0.51
CPSF7-202ENST00000394888 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
CPSF7-202ENST00000394888 PDCP20941 246 aa18.21■□□□□ 0.51
CPSF7-202ENST00000394888 LETM1O95202 739 aaPredicted RBP18.2■□□□□ 0.5
CPSF7-202ENST00000394888 PDIA4P13667 645 aaKnown RBP18.2■□□□□ 0.5
CPSF7-202ENST00000394888 GPTP24298 496 aa18.2■□□□□ 0.5
CPSF7-202ENST00000394888 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
CPSF7-202ENST00000394888 TPRNQ4KMQ1 711 aa18.2■□□□□ 0.5
CPSF7-202ENST00000394888 EP400Q96L91 3159 aa18.2■□□□□ 0.5
CPSF7-202ENST00000394888 KAT6BQ8WYB5 2073 aa18.2■□□□□ 0.5
CPSF7-202ENST00000394888 EVA1CP58658 441 aa18.2■□□□□ 0.5
CPSF7-202ENST00000394888 ZNF274Q96GC6 653 aaPredicted RBP18.2■□□□□ 0.5
CPSF7-202ENST00000394888 ADCY5O95622 1261 aa18.2■□□□□ 0.5
CPSF7-202ENST00000394888 ARID4AP29374 1257 aaPredicted RBP18.2■□□□□ 0.5
CPSF7-202ENST00000394888 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
CPSF7-202ENST00000394888 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
CPSF7-202ENST00000394888 HMGB1P09429 215 aaKnown RBP18.19■□□□□ 0.5
CPSF7-202ENST00000394888 NAA16Q6N069 864 aaPredicted RBP18.19■□□□□ 0.5
CPSF7-202ENST00000394888 DACT1Q9NYF0 836 aa18.19■□□□□ 0.5
CPSF7-202ENST00000394888 COL1A1P02452 1464 aaPredicted RBP18.19■□□□□ 0.5
CPSF7-202ENST00000394888 ADD2P35612 726 aa18.19■□□□□ 0.5
CPSF7-202ENST00000394888 FKBP4Q02790 459 aaKnown RBP eCLIP18.19■□□□□ 0.5
CPSF7-202ENST00000394888 ENGASEQ8NFI3 743 aa18.19■□□□□ 0.5
CPSF7-202ENST00000394888 PPFIA3O75145 1194 aa18.18■□□□□ 0.5
CPSF7-202ENST00000394888 CLSTN2Q9H4D0 955 aa18.18■□□□□ 0.5
CPSF7-202ENST00000394888 KIAA1551Q9HCM1 1747 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms