RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
SFMBT1-201ENST00000394752 ZNF335Q9H4Z2 1342 aaPredicted RBP17.05■□□□□ 0.32
SFMBT1-201ENST00000394752 EYA2O00167 538 aa17.05■□□□□ 0.32
SFMBT1-201ENST00000394752 ATP2B3Q16720 1220 aa17.05■□□□□ 0.32
SFMBT1-201ENST00000394752 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
SFMBT1-201ENST00000394752 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
SFMBT1-201ENST00000394752 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
SFMBT1-201ENST00000394752 ERBB4Q15303 1308 aa17.05■□□□□ 0.32
SFMBT1-201ENST00000394752 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 FILIP1LQ4L180 1135 aa17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 TLR7Q9NYK1 1049 aaKnown RBP17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 IGKV5-2P06315 115 aa17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 IARSP41252 1262 aaKnown RBP17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 TMEM67Q5HYA8 995 aa17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
SFMBT1-201ENST00000394752 FSD2A1L4K1 749 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 JAK2O60674 1132 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 MTX1Q13505 466 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 DDB1Q16531 1140 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 ZNF652Q9Y2D9 606 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 PTPDC1A2A3K4 754 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 OFD1O75665 1012 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 TNNT3P45378 269 aaPredicted RBP17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 METAP2P50579 478 aaKnown RBP eCLIP17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 ATP2B2Q01814 1243 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 TMC6Q7Z403 805 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 TMX1Q9H3N1 280 aa17.03■□□□□ 0.32
SFMBT1-201ENST00000394752 A0A1B0GUL7 405 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 PRKCSHP14314 528 aaPredicted RBP17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 PTGS1P23219 599 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 ME3Q16798 604 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 ADCK5Q3MIX3 580 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 CDC37L1Q7L3B6 337 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 LSG1Q9H089 658 aaKnown RBP17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 COPRSQ9NQ92 184 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 CTAGE5O15320 804 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 NAP1L1P55209 391 aaKnown RBP17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 STX1AQ16623 288 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 OTUD7BQ6GQQ9 843 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 CNNM3Q8NE01 707 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.32
SFMBT1-201ENST00000394752 A0A0D9SFI3 127 aa17.02■□□□□ 0.31
SFMBT1-201ENST00000394752 ATP5JP18859 108 aa17.02■□□□□ 0.31
SFMBT1-201ENST00000394752 SMTNL1A8MU46 457 aa17.02■□□□□ 0.31
SFMBT1-201ENST00000394752 DHX32Q7L7V1 743 aaKnown RBP17.02■□□□□ 0.31
SFMBT1-201ENST00000394752 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.31
SFMBT1-201ENST00000394752 SLC5A1P13866 664 aa17.01■□□□□ 0.31
SFMBT1-201ENST00000394752 ATP6V1AP38606 617 aa17.01■□□□□ 0.31
SFMBT1-201ENST00000394752 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
SFMBT1-201ENST00000394752 PRC1O43663 620 aa17.01■□□□□ 0.31
SFMBT1-201ENST00000394752 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
SFMBT1-201ENST00000394752 TXLNAP40222 546 aa17.01■□□□□ 0.31
SFMBT1-201ENST00000394752 IRS4O14654 1257 aaPredicted RBP17■□□□□ 0.31
SFMBT1-201ENST00000394752 SASH1O94885 1247 aa17■□□□□ 0.31
SFMBT1-201ENST00000394752 HEG1Q9ULI3 1381 aa17■□□□□ 0.31
SFMBT1-201ENST00000394752 CPLX3Q8WVH0 158 aa17■□□□□ 0.31
SFMBT1-201ENST00000394752 NOL7Q9UMY1 257 aaKnown RBP17■□□□□ 0.31
SFMBT1-201ENST00000394752 ZFYP08048 801 aaPredicted RBP17■□□□□ 0.31
SFMBT1-201ENST00000394752 GPS2Q13227 327 aa17■□□□□ 0.31
SFMBT1-201ENST00000394752 RNF113AO15541 343 aaKnown RBP17■□□□□ 0.31
SFMBT1-201ENST00000394752 AOPEPQ8N6M6 819 aa17■□□□□ 0.31
SFMBT1-201ENST00000394752 TTF1Q15361 905 aaPredicted RBP16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 ERCC4Q92889 916 aaPredicted RBP16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 KIF18AQ8NI77 898 aa16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 TRIM34Q9BYJ4 488 aa16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 NSFL1CQ9UNZ2 370 aaKnown RBP16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 URI1O94763 535 aaPredicted RBP16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 LMOD1P29536 600 aaPredicted RBP16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 KBTBD3Q8NAB2 608 aa16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
SFMBT1-201ENST00000394752 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 A0A1B0GVL5 298 aa16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 CBFA2T2O43439 604 aa16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 MRPS27Q92552 414 aaKnown RBP16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 WASF1Q92558 559 aa16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 NGLY1Q96IV0 654 aa16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 V9GYY5 206 aaPredicted RBP16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 PEAK1Q9H792 1746 aa16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 TOP1P11387 765 aaKnown RBP16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 SKILP12757 684 aa16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 TEX35Q5T0J7 233 aa16.98■□□□□ 0.31
SFMBT1-201ENST00000394752 SSRP1Q08945 709 aaKnown RBP16.97■□□□□ 0.31
SFMBT1-201ENST00000394752 TM6SF1Q9BZW5 370 aa16.97■□□□□ 0.31
SFMBT1-201ENST00000394752 ASAP1Q9ULH1 1129 aa16.97■□□□□ 0.31
SFMBT1-201ENST00000394752 LMTK3Q96Q04 1460 aa16.97■□□□□ 0.31
SFMBT1-201ENST00000394752 HS1BP3Q53T59 392 aa16.97■□□□□ 0.31
SFMBT1-201ENST00000394752 UBXN4Q92575 508 aa16.97■□□□□ 0.31
SFMBT1-201ENST00000394752 PIK3C2AO00443 1686 aa16.97■□□□□ 0.31
SFMBT1-201ENST00000394752 IKQ13123 557 aaPredicted RBP16.97■□□□□ 0.31
SFMBT1-201ENST00000394752 HELLSQ9NRZ9 838 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms