RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ARHGEF5Q12774 1597 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 PEAK1Q9H792 1746 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 OVOS2A0A0G2JMS6 1433 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 OVOS2A0A0J9YW53 1432 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 PALM3A6NDB9 673 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 USP17L5A8MUK1 530 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 NNTQ13423 1086 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 C9orf131Q5VYM1 1079 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 OVOS2Q6IE36 1432 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 TBC1D9Q6ZT07 1266 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 CCDC116Q8IYX3 515 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 HIRIP3Q9BW71 556 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 PRDM11Q9NQV5 511 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 PGPEP1Q9NXJ5 209 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 CHIC2Q9UKJ5 165 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 USTQ9Y2C2 406 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 PAPPAQ13219 1627 aa4.72□□□□□ -1.65
ECHDC1-205ENST00000368295 TRIOBPQ9H2D6 2365 aa4.71□□□□□ -1.65
ECHDC1-205ENST00000368295 K7ELQ4 463 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 MARCH6O60337 910 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 TCF3P15923 654 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 GRM5P41594 1212 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 DGKZQ13574 1117 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 EML3Q32P44 896 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 GORABQ5T7V8 394 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 GCC1Q96CN9 775 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 CCDC85AQ96PX6 553 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 COL25A1Q9BXS0 654 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 TFIP11Q9UBB9 837 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 MAFBQ9Y5Q3 323 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 COL14A1Q05707 1796 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 USP17L3A6NCW0 530 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 USP17L4A6NCW7 530 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 ERVH48-1M5A8F1 160 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 CFAP70Q5T0N1 1121 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 USP17L2Q6R6M4 530 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 ARHGAP27Q6ZUM4 889 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 USP17L1Q7RTZ2 530 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 SIRT1Q96EB6 747 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 SLC52A1Q9NWF4 448 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 EMILIN1Q9Y6C2 1016 aa4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 LRPPRCP42704 1394 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-205ENST00000368295 SBF2Q86WG5 1849 aa4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 VCANP13611 3396 aa4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 EIF2AK4Q9P2K8 1649 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 MYCP01106 439 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 LMOD1P29536 600 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 OXLD1Q5BKU9 147 aa4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 MARCH10Q8NA82 808 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 UBXN4Q92575 508 aa4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 SCARF2Q96GP6 870 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 CCDC18Q5T9S5 1454 aa4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 CCDC144AA2RUR9 1427 aa4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 FMN2Q9NZ56 1722 aa4.7□□□□□ -1.66
ECHDC1-205ENST00000368295 TPD52L2O43399 206 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 NR3C2P08235 984 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 MCCP23508 829 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 PPP1R26Q5T8A7 1209 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 TRIM50Q86XT4 487 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 TCP11L2Q8N4U5 519 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 ACSBG1Q96GR2 724 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 DNAJC2Q99543 621 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 NOD1Q9Y239 953 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 PPME1Q9Y570 386 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 COL24A1Q17RW2 1714 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 PXDNLA1KZ92 1463 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 KIAA0232Q92628 1395 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 COBLO75128 1261 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 MARSP56192 900 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 NCOA4Q13772 614 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 TRIM46Q7Z4K8 759 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 GPATCH11Q8N954 259 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 SNX27Q96L92 541 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 TFCP2L1Q9NZI6 479 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 CD2APQ9Y5K6 639 aa4.69□□□□□ -1.66
ECHDC1-205ENST00000368295 ADAMTS7Q9UKP4 1686 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 ATP7BP35670 1465 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 ATP5J2-PTCD1G3V325 749 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 WDR4P57081 412 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 ZC3H6P61129 1189 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 ERVK-9P63128 1117 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 USP4Q13107 963 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 PBXIP1Q96AQ6 731 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 MRRFQ96E11 262 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 CYLDQ9NQC7 956 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 TMPRSS4Q9NRS4 437 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 IVNS1ABPQ9Y6Y0 642 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 SSH2Q76I76 1423 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 KDM2BQ8NHM5 1336 aa4.68□□□□□ -1.66
ECHDC1-205ENST00000368295 ZIC2O95409 532 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 CENPBP07199 599 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 TSPY4P0CV99 314 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 TSPY10P0CW01 314 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 ERCC3P19447 782 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 RFX1P22670 979 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 EVA1CP58658 441 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 CCDC181Q5TID7 509 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 DEPDC4Q8N2C3 294 aa4.67□□□□□ -1.66
ECHDC1-205ENST00000368295 SPOCK3Q9BQ16 436 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms