RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 TSGA10Q9BZW7 698 aa21.69■■□□□ 1.06
BRPF3-202ENST00000357641 ARHGAP5Q13017 1502 aa21.69■■□□□ 1.06
BRPF3-202ENST00000357641 ALDH3A1P30838 453 aa21.69■■□□□ 1.06
BRPF3-202ENST00000357641 ASIC1P78348 528 aa21.69■■□□□ 1.06
BRPF3-202ENST00000357641 PDE1CQ14123 709 aaPredicted RBP21.69■■□□□ 1.06
BRPF3-202ENST00000357641 CNGA4Q8IV77 575 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 VCXQ9H320 206 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 FERMT1Q9BQL6 677 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 TBCAO75347 108 aaKnown RBP21.68■■□□□ 1.06
BRPF3-202ENST00000357641 BICDL1Q6ZP65 573 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 NEK11Q8NG66 645 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 CABS1Q96KC9 395 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 BAIAP2L1Q9UHR4 511 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 NPHP3Q7Z494 1330 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 GOLGA6BA6NDN3 693 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 SF3A3Q12874 501 aaKnown RBP eCLIP21.68■■□□□ 1.063e-7■■■■□ 23.5
BRPF3-202ENST00000357641 VCX3BQ9H321 246 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 MRVI1Q9Y6F6 885 aa21.68■■□□□ 1.06
BRPF3-202ENST00000357641 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 ZNF75DP51815 510 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 ZNF853P0CG23 659 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 CAPN7Q9Y6W3 813 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 ZWINTO95229 277 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 IFIT5Q13325 482 aaKnown RBP21.67■■□□□ 1.06
BRPF3-202ENST00000357641 C8orf74Q6P047 294 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 RPAINQ86UA6 219 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 MICAL1Q8TDZ2 1067 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 ZBTB43O43298 467 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 CRACR2BQ8N4Y2 399 aaPredicted RBP21.67■■□□□ 1.06
BRPF3-202ENST00000357641 RHPN1Q8TCX5 695 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 ARHGEF2Q92974 986 aaKnown RBP21.67■■□□□ 1.06
BRPF3-202ENST00000357641 FAM184BQ9ULE4 1060 aa21.67■■□□□ 1.06
BRPF3-202ENST00000357641 CCDC38Q502W7 563 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 ARL1P40616 181 aaPredicted RBP21.66■■□□□ 1.06
BRPF3-202ENST00000357641 TOM1L2Q6ZVM7 507 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 BMP15O95972 392 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 EEF2P13639 858 aaKnown RBP21.66■■□□□ 1.06
BRPF3-202ENST00000357641 CCDC110Q8TBZ0 833 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 KAT14Q9H8E8 782 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 CASQ2O14958 399 aaPredicted RBP21.66■■□□□ 1.06
BRPF3-202ENST00000357641 MYL5Q02045 173 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 NCOA1Q15788 1441 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 C9orf84Q5VXU9 1444 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 SLC5A1P13866 664 aa21.66■■□□□ 1.06
BRPF3-202ENST00000357641 GKAP1Q5VSY0 366 aaPredicted RBP21.66■■□□□ 1.06
BRPF3-202ENST00000357641 CCDC174Q6PII3 467 aa21.65■■□□□ 1.06
BRPF3-202ENST00000357641 TACO1Q9BSH4 297 aaKnown RBP21.65■■□□□ 1.06
BRPF3-202ENST00000357641 MBIPQ9NS73 344 aa21.65■■□□□ 1.06
BRPF3-202ENST00000357641 GIGYF1O75420 1035 aaPredicted RBP21.65■■□□□ 1.06
BRPF3-202ENST00000357641 UTP14CQ5TAP6 766 aaKnown RBP21.65■■□□□ 1.06
BRPF3-202ENST00000357641 ZNF131P52739 623 aa21.65■■□□□ 1.06
BRPF3-202ENST00000357641 PLCB3Q01970 1234 aa21.65■■□□□ 1.06
BRPF3-202ENST00000357641 GBP7Q8N8V2 638 aaPredicted RBP21.65■■□□□ 1.06
BRPF3-202ENST00000357641 E7EVH7 732 aa21.65■■□□□ 1.06
BRPF3-202ENST00000357641 DMTNQ08495 405 aa21.65■■□□□ 1.06
BRPF3-202ENST00000357641 CALCOCO2Q13137 446 aa21.65■■□□□ 1.06
BRPF3-202ENST00000357641 TTC21AQ8NDW8 1320 aa21.65■■□□□ 1.06
BRPF3-202ENST00000357641 A6NNZ2 444 aa21.64■■□□□ 1.06
BRPF3-202ENST00000357641 CCT6AP40227 531 aaKnown RBP21.64■■□□□ 1.06
BRPF3-202ENST00000357641 TUBB8Q3ZCM7 444 aa21.64■■□□□ 1.06
BRPF3-202ENST00000357641 CFAP157Q5JU67 520 aa21.64■■□□□ 1.06
BRPF3-202ENST00000357641 AFAP1Q8N556 730 aa21.64■■□□□ 1.06
BRPF3-202ENST00000357641 ZNF445P59923 1031 aa21.64■■□□□ 1.05
BRPF3-202ENST00000357641 AP1ARQ63HQ0 302 aa21.64■■□□□ 1.05
BRPF3-202ENST00000357641 MAP3K2Q9Y2U5 619 aa21.64■■□□□ 1.05
BRPF3-202ENST00000357641 RNASE9P60153 205 aaKnown RBP21.64■■□□□ 1.05
BRPF3-202ENST00000357641 RNF168Q8IYW5 571 aaPredicted RBP21.64■■□□□ 1.05
BRPF3-202ENST00000357641 WTAPQ15007 396 aa21.64■■□□□ 1.05
BRPF3-202ENST00000357641 SLC4A8Q2Y0W8 1093 aa21.64■■□□□ 1.05
BRPF3-202ENST00000357641 TMCO4Q5TGY1 634 aa21.64■■□□□ 1.05
BRPF3-202ENST00000357641 ANKRD24Q8TF21 1146 aa21.64■■□□□ 1.05
BRPF3-202ENST00000357641 INTS4Q96HW7 963 aaKnown RBP21.63■■□□□ 1.05
BRPF3-202ENST00000357641 TUBB2AQ13885 445 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 FYB2Q5VWT5 728 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 CCDC26Q8TAB7 109 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 TUBB2BQ9BVA1 445 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 A0A1B0GVL5 298 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 NBPF7P0C2Y1 421 aaPredicted RBP21.63■■□□□ 1.05
BRPF3-202ENST00000357641 ATP5DP30049 168 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 SYNCQ9H7C4 482 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 CBX8Q9HC52 389 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 PEX19P40855 299 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 IGSF22Q8N9C0 903 aa21.63■■□□□ 1.05
BRPF3-202ENST00000357641 TSPY2A6NKD2 308 aa21.62■■□□□ 1.05
BRPF3-202ENST00000357641 MEIS3Q99687 375 aa21.62■■□□□ 1.05
BRPF3-202ENST00000357641 ERCC3P19447 782 aa21.62■■□□□ 1.05
BRPF3-202ENST00000357641 WHAMMP3Q1A5X7 153 aa21.62■■□□□ 1.05
BRPF3-202ENST00000357641 MCUR1Q96AQ8 359 aa21.62■■□□□ 1.05
BRPF3-202ENST00000357641 VSIG1Q86XK7 387 aa21.62■■□□□ 1.05
BRPF3-202ENST00000357641 FRMD3A2A2Y4 597 aa21.62■■□□□ 1.05
BRPF3-202ENST00000357641 TTF2Q9UNY4 1162 aaKnown RBP21.62■■□□□ 1.05
BRPF3-202ENST00000357641 RTN1Q16799 776 aa21.61■■□□□ 1.05
BRPF3-202ENST00000357641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.61■■□□□ 1.058e-6■■□□□ 11.7
BRPF3-202ENST00000357641 RNF10Q8N5U6 811 aaKnown RBP21.61■■□□□ 1.05
BRPF3-202ENST00000357641 TRIM68Q6AZZ1 485 aa21.61■■□□□ 1.05
BRPF3-202ENST00000357641 ATP6V0A2Q9Y487 856 aa21.61■■□□□ 1.05
BRPF3-202ENST00000357641 BICDL2A1A5D9 508 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 TXNDC9O14530 226 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 UAP1Q16222 522 aaPredicted RBP21.6■■□□□ 1.05
BRPF3-202ENST00000357641 IFT20Q8IY31 132 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms