RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 RFC4P35249 363 aa20.7■□□□□ 0.91
SLC3A2-201ENST00000338663 TAF1P21675 1872 aa20.7■□□□□ 0.9
SLC3A2-201ENST00000338663 PHF14O94880 888 aa20.7■□□□□ 0.9
SLC3A2-201ENST00000338663 MCM5P33992 734 aa20.7■□□□□ 0.9
SLC3A2-201ENST00000338663 IGHMBP2P38935 993 aaKnown RBP20.7■□□□□ 0.9
SLC3A2-201ENST00000338663 PTH1RQ03431 593 aa20.7■□□□□ 0.9
SLC3A2-201ENST00000338663 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
SLC3A2-201ENST00000338663 PUM3Q15397 648 aaKnown RBP20.7■□□□□ 0.9
SLC3A2-201ENST00000338663 SLC10A5Q5PT55 438 aa20.7■□□□□ 0.9
SLC3A2-201ENST00000338663 PDLIM2Q96JY6 352 aa20.69■□□□□ 0.9
SLC3A2-201ENST00000338663 FOXD4L1Q9NU39 408 aa20.69■□□□□ 0.9
SLC3A2-201ENST00000338663 LMBRD1Q9NUN5 540 aa20.69■□□□□ 0.9
SLC3A2-201ENST00000338663 TNRC6CQ9HCJ0 1690 aaKnown RBP20.69■□□□□ 0.9
SLC3A2-201ENST00000338663 GTF2E1P29083 439 aaPredicted RBP20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 NBPF5PQ86XG9 351 aaPredicted RBP20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 CDC5LQ99459 802 aaKnown RBP20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 ZNF500O60304 480 aaPredicted RBP20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 FGFR2P21802 821 aa20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 ZSCAN23Q3MJ62 389 aa20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 ZNF512BQ96KM6 892 aaPredicted RBP20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 MAP7D2Q96T17 732 aa20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 SNX14Q9Y5W7 946 aa20.68■□□□□ 0.9
SLC3A2-201ENST00000338663 NEK4P51957 841 aa20.67■□□□□ 0.9
SLC3A2-201ENST00000338663 C3orf67Q6ZVT6 689 aa20.67■□□□□ 0.9
SLC3A2-201ENST00000338663 ZNF589Q86UQ0 364 aaPredicted RBP20.67■□□□□ 0.9
SLC3A2-201ENST00000338663 LPIN2Q92539 896 aa20.67■□□□□ 0.9
SLC3A2-201ENST00000338663 NOL7Q9UMY1 257 aaKnown RBP20.67■□□□□ 0.9
SLC3A2-201ENST00000338663 CARMIL3Q8ND23 1372 aa20.67■□□□□ 0.9
SLC3A2-201ENST00000338663 MCTP1Q6DN14 999 aa20.66■□□□□ 0.9
SLC3A2-201ENST00000338663 MAP4K1Q92918 833 aa20.66■□□□□ 0.9
SLC3A2-201ENST00000338663 TNS1Q9HBL0 1735 aaKnown RBP20.66■□□□□ 0.9
SLC3A2-201ENST00000338663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.66■□□□□ 0.9
SLC3A2-201ENST00000338663 SCARF1Q14162 830 aa20.66■□□□□ 0.9
SLC3A2-201ENST00000338663 TPTE2Q6XPS3 522 aa20.66■□□□□ 0.9
SLC3A2-201ENST00000338663 KCNB2Q92953 911 aa20.66■□□□□ 0.9
SLC3A2-201ENST00000338663 FKBP4Q02790 459 aaKnown RBP eCLIP20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 NECTIN1Q15223 517 aa20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 HELBQ8NG08 1087 aaPredicted RBP20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 RBM8AQ9Y5S9 174 aaKnown RBP20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 SLC5A1P13866 664 aa20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 HMGB2P26583 209 aaKnown RBP20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 MCM2P49736 904 aa20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 CSPP1Q1MSJ5 1256 aa20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 MCMDC2Q4G0Z9 681 aa20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 RASEFQ8IZ41 740 aa20.65■□□□□ 0.9
SLC3A2-201ENST00000338663 RGPD3A6NKT7 1758 aaPredicted RBP20.64■□□□□ 0.9
SLC3A2-201ENST00000338663 RGPD4Q7Z3J3 1758 aa20.64■□□□□ 0.9
SLC3A2-201ENST00000338663 DOCK2Q92608 1830 aa20.64■□□□□ 0.9
SLC3A2-201ENST00000338663 CHGBP05060 677 aa20.64■□□□□ 0.89
SLC3A2-201ENST00000338663 ANKRD18AQ8IVF6 992 aa20.64■□□□□ 0.89
SLC3A2-201ENST00000338663 MYO5AQ9Y4I1 1855 aaKnown RBP20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 TAF5LO75529 589 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 MBD3O95983 291 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 ARID4AP29374 1257 aaPredicted RBP20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 MCAMP43121 646 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 TXNRD1Q16881 649 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 LRRFIP1Q32MZ4 808 aaKnown RBP20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 PRPF40BQ6NWY9 871 aaKnown RBP20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 NLRP3Q96P20 1036 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 HELLSQ9NRZ9 838 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 RXRBP28702 533 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 ZAP70P43403 619 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 KCNJ4P48050 445 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 CHRNDQ07001 517 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 ZMYM1Q5SVZ6 1142 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 CCDC102BQ68D86 513 aa20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 CAVIN1Q6NZI2 390 aaKnown RBP20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 SEC62Q99442 399 aaKnown RBP20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 UPF3BQ9BZI7 483 aaKnown RBP20.63■□□□□ 0.89
SLC3A2-201ENST00000338663 RNF113AO15541 343 aaKnown RBP20.62■□□□□ 0.89
SLC3A2-201ENST00000338663 UQCRFS1P1P0C7P4 283 aa20.62■□□□□ 0.89
SLC3A2-201ENST00000338663 PHKA1P46020 1223 aa20.62■□□□□ 0.89
SLC3A2-201ENST00000338663 NFIXQ14938 502 aa20.62■□□□□ 0.89
SLC3A2-201ENST00000338663 CREB3L3Q68CJ9 461 aa20.62■□□□□ 0.89
SLC3A2-201ENST00000338663 PI16Q6UXB8 463 aa20.61■□□□□ 0.89
SLC3A2-201ENST00000338663 PKNOX2Q96KN3 472 aa20.61■□□□□ 0.89
SLC3A2-201ENST00000338663 BSDC1Q9NW68 430 aaPredicted RBP20.61■□□□□ 0.89
SLC3A2-201ENST00000338663 ZFYP08048 801 aaPredicted RBP20.61■□□□□ 0.89
SLC3A2-201ENST00000338663 ZKSCAN1P17029 563 aaPredicted RBP20.61■□□□□ 0.89
SLC3A2-201ENST00000338663 LRSAM1Q6UWE0 723 aa20.61■□□□□ 0.89
SLC3A2-201ENST00000338663 CCDC129Q6ZRS4 1044 aa20.61■□□□□ 0.89
SLC3A2-201ENST00000338663 PROM2Q8N271 834 aa20.61■□□□□ 0.89
SLC3A2-201ENST00000338663 PLSCR1O15162 318 aa20.6■□□□□ 0.89
SLC3A2-201ENST00000338663 GYS1P13807 737 aa20.6■□□□□ 0.89
SLC3A2-201ENST00000338663 RNF20Q5VTR2 975 aa20.6■□□□□ 0.89
SLC3A2-201ENST00000338663 MTERF4Q7Z6M4 381 aaKnown RBP20.6■□□□□ 0.89
SLC3A2-201ENST00000338663 TM6SF1Q9BZW5 370 aa20.6■□□□□ 0.89
SLC3A2-201ENST00000338663 RPAP1Q9BWH6 1393 aaPredicted RBP20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 MAST3O60307 1309 aa20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 SLC27A2O14975 620 aa20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 HMG20BQ9P0W2 317 aa20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 CCDC39Q9UFE4 941 aa20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 TTF1Q15361 905 aaPredicted RBP20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 CNBD1Q8NA66 436 aa20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 CELF1Q92879 486 aaKnown RBP20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 RBSNQ9H1K0 784 aa20.59■□□□□ 0.89
SLC3A2-201ENST00000338663 SNAP23O00161 211 aa20.58■□□□□ 0.88
SLC3A2-201ENST00000338663 NPHP1O15259 732 aa20.58■□□□□ 0.88
SLC3A2-201ENST00000338663 SLFNL1Q499Z3 407 aa20.58■□□□□ 0.88
SLC3A2-201ENST00000338663 TTC14Q96N46 770 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms