RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 DZIP3Q86Y13 1208 aaKnown RBP18.51■□□□□ 0.55
TSC22D3-201ENST00000315660 LRRC2Q9BYS8 371 aa18.51■□□□□ 0.55
TSC22D3-201ENST00000315660 FERMT3Q86UX7 667 aa18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 BRF1Q92994 677 aa18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 TBC1D2BQ9UPU7 963 aa18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 ABCC12Q96J65 1359 aa18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 A0A0G2JLW4 131 aa18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 ZAP70P43403 619 aa18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 TERF1P54274 439 aa18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 KLHL34Q8N239 644 aa18.5■□□□□ 0.55
TSC22D3-201ENST00000315660 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 E7EWF7 191 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 ZNF500O60304 480 aaPredicted RBP18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 JAK2O60674 1132 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 EXOSC10Q01780 885 aaKnown RBP18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 TPRNQ4KMQ1 711 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 FAM184AQ8NB25 1140 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 RNF214Q8ND24 703 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 PDE8AO60658 829 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 WASHC4Q2M389 1173 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 CNNM1Q9NRU3 951 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 CTNNA3Q9UI47 895 aa18.49■□□□□ 0.55
TSC22D3-201ENST00000315660 UBN2Q6ZU65 1347 aa18.48■□□□□ 0.55
TSC22D3-201ENST00000315660 PFKFB2O60825 505 aa18.48■□□□□ 0.55
TSC22D3-201ENST00000315660 ZNF34Q8IZ26 560 aa18.48■□□□□ 0.55
TSC22D3-201ENST00000315660 NUP98P52948 1817 aa18.48■□□□□ 0.55
TSC22D3-201ENST00000315660 LAMA4Q16363 1823 aa18.48■□□□□ 0.55
TSC22D3-201ENST00000315660 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
TSC22D3-201ENST00000315660 SCRN1Q12765 414 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 VGLL2Q8N8G2 317 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 LLPHQ9BRT6 129 aaKnown RBP18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 ADAMTS2O95450 1211 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 TTLL5Q6EMB2 1281 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 FAM173BQ6P4H8 233 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 CHMP4CQ96CF2 233 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 SCAND2PQ9GZW5 306 aaPredicted RBP18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 MYH3P11055 1940 aa18.47■□□□□ 0.55
TSC22D3-201ENST00000315660 DDB1Q16531 1140 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 TTC6Q86TZ1 520 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 APPBP2Q92624 585 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 KIF3AQ9Y496 699 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 ELP1O95163 1332 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 H3BQV1 296 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 FOXP2O15409 715 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 MCM5P33992 734 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 MCAMP43121 646 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 EIF5P55010 431 aaKnown RBP18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 APOBRQ0VD83 1088 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 IFFO2Q5TF58 517 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 SMARCC2Q8TAQ2 1214 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 ZKSCAN5Q9Y2L8 839 aa18.46■□□□□ 0.55
TSC22D3-201ENST00000315660 ZSCAN25Q6NSZ9 544 aa18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 INTS5Q6P9B9 1019 aaKnown RBP18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 ZNF512BQ96KM6 892 aaPredicted RBP18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 PDCL3Q9H2J4 239 aa18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 PDE8BO95263 885 aa18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 IMMTQ16891 758 aaKnown RBP18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 PUS7LQ9H0K6 701 aaKnown RBP18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 CCDC87Q9NVE4 849 aa18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 CCDC39Q9UFE4 941 aa18.45■□□□□ 0.54
TSC22D3-201ENST00000315660 SLIT2O94813 1529 aa18.44■□□□□ 0.54
TSC22D3-201ENST00000315660 A0A0G2JS52 829 aa18.44■□□□□ 0.54
TSC22D3-201ENST00000315660 HMGN5P82970 282 aaKnown RBP18.44■□□□□ 0.54
TSC22D3-201ENST00000315660 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
TSC22D3-201ENST00000315660 AK7Q96M32 723 aa18.44■□□□□ 0.54
TSC22D3-201ENST00000315660 NRAPQ86VF7 1730 aa18.44■□□□□ 0.54
TSC22D3-201ENST00000315660 GOLGA6L4A6NEF3 574 aa18.43■□□□□ 0.54
TSC22D3-201ENST00000315660 TTF1Q15361 905 aaPredicted RBP18.43■□□□□ 0.54
TSC22D3-201ENST00000315660 UVSSAQ2YD98 709 aa18.43■□□□□ 0.54
TSC22D3-201ENST00000315660 NSUN7Q8NE18 718 aaKnown RBP18.43■□□□□ 0.54
TSC22D3-201ENST00000315660 ACSBG1Q96GR2 724 aa18.43■□□□□ 0.54
TSC22D3-201ENST00000315660 ZSCAN16Q9H4T2 348 aaPredicted RBP18.43■□□□□ 0.54
TSC22D3-201ENST00000315660 MARCH10Q8NA82 808 aaPredicted RBP18.43■□□□□ 0.54
TSC22D3-201ENST00000315660 SPATA32Q96LK8 384 aa18.43■□□□□ 0.54
TSC22D3-201ENST00000315660 CTDNEP1O95476 244 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 FGAP02671 866 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 CRKLP46109 303 aaKnown RBP18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 RESTQ13127 1097 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 CHST3Q7LGC8 479 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 R3HCC1Q9Y3T6 440 aaKnown RBP18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 AKAP11Q9UKA4 1901 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 GPAA1O43292 621 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 FBXL16Q8N461 479 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 ZNF274Q96GC6 653 aaPredicted RBP18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 NAP1L2Q9ULW6 460 aaPredicted RBP18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 LRP5O75197 1615 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 NWD2Q9ULI1 1742 aa18.42■□□□□ 0.54
TSC22D3-201ENST00000315660 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 SIK1P57059 783 aa18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 HAND2P61296 217 aa18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 TFIP11Q9UBB9 837 aaKnown RBP18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 PTPDC1A2A3K4 754 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms