RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Syt10Q9R0N4 523 aa18.64■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Krt8P11679 490 aaKnown RBP18.64■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Swap70Q6A028 585 aaKnown RBP18.64■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rab3gap2Q8BMG7 1366 aa18.64■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Slc14a2Q8R4T9 930 aa18.64■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Iqsec3Q3TES0 1195 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Kif22Q3V300 660 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ccdc152E9PX14 254 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Spc25Q3UA16 226 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Srek1ip1Q4V9W2 153 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Nlrp14Q6B966 993 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rrp1P56183 494 aaKnown RBP18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 SbdsP70122 250 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Leo1Q5XJE5 667 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Mpp4Q6P7F1 635 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Brd1E9PZ26 1189 aaKnown RBP18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Cers3Q1A3B0 383 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rapgef1Q3UHC1 1224 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Gtf3c5Q8R2T8 520 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Gm10378F6XQQ1 160 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 ClgnP52194 611 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Q7TT23 1179 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 DymQ8CHY3 669 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Klc3Q91W40 508 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Parp10Q8CIE4 960 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Mtmr3Q8K296 1196 aa18.63■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Elp1Q7TT37 1333 aaKnown RBP18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Nsfl1cQ9CZ44 370 aaKnown RBP18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Mgea5Q9EQQ9 916 aa18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 NxnP97346 435 aa18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Lrriq3Q14DL3 633 aa18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Zkscan7E9PVW1 718 aa18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Klhdc4Q921I2 584 aa18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Cnga4Q3UW12 575 aa18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 St13Q99L47 371 aaKnown RBP18.62■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ccdc70Q9D9B0 223 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Nsun2Q1HFZ0 757 aaKnown RBP18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 RubcnQ80U62 956 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rnf168Q80XJ2 565 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Trim7Q923T7 510 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Cyp7a1Q64505 503 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rab11fip4Q8BQP8 635 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Cdk19Q8BWD8 501 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 GptQ8QZR5 496 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Gm2030D3Z7C4 212 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 4931400O07RikQ9D4M5 137 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Cep162Q6ZQ06 1403 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ulk3Q3U3Q1 472 aa18.61■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ccdc13D3YV10 709 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Kifap3P70188 793 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Q8R1Y2 203 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 TrdnE9Q9K5 693 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Flot1O08917 428 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Psmb7P70195 277 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ppp2r1aQ76MZ3 589 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rsph10bE9PYQ0 876 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Haus1Q8BHX1 278 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Dnaaf1Q9D2H9 634 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Znf280dQ68FE8 974 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 1700013H16RikQ9DAC5 291 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 PalmQ9Z0P4 383 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Tbc1d8bA3KGB4 1114 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ncf2O70145 525 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Taok1Q5F2E8 1001 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Gm3409A0A0G2JE67 319 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Heatr4E9Q357 955 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Zbtb12Q9Z150 459 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Baz1aO88379 1555 aa18.6■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Akr1c19G3X9Y6 323 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Trove2O08848 538 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rnf14Q9JI90 485 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ift81O35594 676 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rbbp5Q8BX09 538 aaKnown RBP18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Terf1P70371 421 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ercc5P35689 1170 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Msantd4Q91YU3 345 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Csrnp2Q8BGQ2 534 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Serpinb13Q8CDC0 389 aa18.59■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Casp2P29594 452 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 ThrspQ62264 150 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Med10Q9CXU0 135 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 EsrrbQ61539 433 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ppp2r5dQ91V89 594 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Chmp2aQ9DB34 222 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 WtapQ9ER69 396 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Proca1B0QZF7 307 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Igbp1Q61249 340 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ranbp6Q8BIV3 1105 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Cabp5Q9JLK3 173 aa18.58■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Rasa1E9PYG6 1038 aa18.58■□□□□ 0.56
Ubr3-202ENSMUST00000112251 Atp1a2Q6PIE5 1020 aa18.58■□□□□ 0.56
Ubr3-202ENSMUST00000112251 SpopQ6ZWS8 374 aa18.58■□□□□ 0.56
Ubr3-202ENSMUST00000112251 Ttc4Q8R3H9 386 aa18.58■□□□□ 0.56
Ubr3-202ENSMUST00000112251 Atp6v1e2Q9D593 226 aa18.58■□□□□ 0.56
Ubr3-202ENSMUST00000112251 Gm6583E9Q8Z1 469 aa18.58■□□□□ 0.56
Ubr3-202ENSMUST00000112251 Map3k11Q80XI6 850 aa18.58■□□□□ 0.56
Ubr3-202ENSMUST00000112251 Ccdc175E9PVB3 822 aa18.57■□□□□ 0.56
Ubr3-202ENSMUST00000112251 Cfap73J3QPZ5 306 aa18.57■□□□□ 0.56
Ubr3-202ENSMUST00000112251 Cdca8Q8BHX3 289 aa18.57■□□□□ 0.56
Ubr3-202ENSMUST00000112251 HnrnpmQ9D0E1 729 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms