RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Map10Q8BJS7 891 aa6.01□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Lce1a1Q9CQH5 143 aa6.01□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Gtf2e1Q9D0D5 440 aa6.01□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Lce1gQ9D195 139 aa6.01□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Zdbf2Q5SS00 2493 aaKnown RBP6.01□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Akap11E9Q777 1895 aa6.01□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 AtrnQ9WU60 1428 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 TonslQ6NZL6 1363 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 TnrQ8BYI9 1358 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Lrp5Q91VN0 1614 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Duxf3A0A0N4SV92 674 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Bfsp1A2AMT1 669 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Apba3O88888 571 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Cnga1P29974 684 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Pou3f3P31361 497 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Fam184bQ0KK56 942 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Snapc1Q8K0S9 389 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Emilin1Q99K41 1017 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Lgr5Q9Z1P4 907 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Nphp4P59240 1425 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Kif16bB1AVY7 1312 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 CenpjQ569L8 1344 aa6□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Ly6c1P0CW02 131 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Ly6c2P0CW03 131 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Hoxd8P23463 289 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Dennd6aQ8BH65 605 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Lsm11Q8BUV6 361 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Exosc9Q9JHI7 438 aaKnown RBP5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Igf2rQ07113 2483 aaKnown RBP5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Fam171a2A2A699 822 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Cers3Q1A3B0 383 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Ncoa4Q5U4H9 625 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Sik1Q60670 779 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 IgflQ6B9Z0 140 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Trim46Q7TNM2 759 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Mtnr1bQ8CIQ6 364 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 HnrnplQ8R081 586 aaKnown RBP5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 GneQ91WG8 722 aaKnown RBP5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Nlgn1Q99K10 843 aa5.99□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 A030005L19RikA0A1Y7VIU2 113 aa5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 FosbP13346 338 aa5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Hspa5P20029 655 aaKnown RBP5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Fam198bQ3UPI1 517 aa5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Rgs19Q9CX84 216 aa5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Trpc5Q9QX29 975 aa5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Add1Q9QYC0 735 aaKnown RBP5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 FancaQ9JL70 1439 aa5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Kat6bQ8BRB7 1872 aa5.98□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Vps33bP59016 617 aa5.97□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Exoc5Q3TPX4 708 aa5.97□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Rnf180Q3U827 592 aa5.97□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Ankrd13dQ6PD24 605 aa5.97□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Chmp3Q9CQ10 224 aa5.97□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Ube2fQ9CY34 185 aa5.97□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Kdf1A2A9F4 397 aa5.96□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Fmnl2A2APV2 1086 aa5.96□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Fhl2O70433 279 aa5.96□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 CrklP47941 303 aa5.96□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Usp48Q3V0C5 1052 aa5.96□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 OptnQ8K3K8 584 aa5.96□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 Trip4Q9QXN3 581 aa5.96□□□□□ -1.45
Hmgb1-203ENSMUST00000110505 FanciQ8K368 1330 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Ccer2J3QPU5 274 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Aldh2P47738 519 aaKnown RBP5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Wnt11P48615 354 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Eif4g2Q62448 906 aaKnown RBP5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 IqceQ6PCQ0 778 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Tmcc2Q80W04 706 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 SympkQ80X82 1284 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Nol11Q8BJW5 723 aaKnown RBP5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Phf20l1Q8CCJ9 1013 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Afg3l2Q8JZQ2 802 aaKnown RBP5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Socs7Q8VHQ2 579 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Ginm1Q91WR6 327 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Kcnh5Q920E3 988 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Clstn1Q9EPL2 979 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Usp21Q9QZL6 566 aa5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Prpf40aQ9R1C7 953 aaKnown RBP5.96□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Gm7544A0A1Y7VJ58 118 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Fam124aD3Z5V4 536 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Sema3fO88632 785 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Zranb3Q6NZP1 1069 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Msl1Q6PDM1 616 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Cd209dQ91ZW8 237 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 SelenooQ9DBC0 667 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Srcin1Q9QWI6 1250 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Ptpn23Q6PB44 1692 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Nsd3Q6P2L6 1439 aa5.95□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Magea6O89010 325 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Gpr162Q3UN16 588 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Fhod1Q6P9Q4 1197 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Magea3Q6T340 320 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Pcdhb2Q91Y00 799 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Galntl5Q9D4M9 431 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 NbnQ9R207 751 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Mst1rQ62190 1378 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Smim22J3QP37 91 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Tll1Q62381 1013 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Mvb12bQ6KAU4 317 aa5.94□□□□□ -1.46
Hmgb1-203ENSMUST00000110505 Paxip1Q6NZQ4 1056 aa5.94□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms