RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Znf622Q91VY9 476 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Clstn1Q9EPL2 979 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Cwc15Q9JHS9 229 aaKnown RBP12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Stk3Q9JI10 497 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Mtcl1Q3UHU5 1945 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Pappa2E9PZ87 1789 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Tnnt1O88346 262 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 VegfbP49766 207 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Tax1bp1Q3UKC1 814 aaKnown RBP12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Bag1Q60739 355 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Fstl1Q62356 306 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 IqceQ6PCQ0 778 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Znf653Q6YND2 615 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Usp33Q8R5K2 909 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Spaca1Q9DA48 305 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Rapgef4Q9EQZ6 1011 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Mical3Q8CJ19 1993 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Prr5lA2AVJ5 370 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 1700018F24RikB2RW27 314 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Gm10354K7N6A0 256 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Sycp1Q62209 993 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Ccdc40Q8BI79 1192 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Lsm14aQ8K2F8 462 aaKnown RBP12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Myo5bP21271 1818 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Lire1P11260 357 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Clk1P22518 483 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Snai1Q02085 264 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Ddx49Q4FZF3 480 aaKnown RBP12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Kiaa0754Q69ZZ9 979 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Casc1Q6TDU8 730 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Zkscan8Q8BSL0 588 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 PigbQ9JJQ0 542 aa12.6□□□□□ -0.39
Trim61-201ENSMUST00000078409 Scn9aQ62205 1984 aa12.59□□□□□ -0.39
Trim61-201ENSMUST00000078409 Rsph10bE9PYQ0 876 aa12.59□□□□□ -0.39
Trim61-201ENSMUST00000078409 Usp48Q3V0C5 1052 aa12.59□□□□□ -0.39
Trim61-201ENSMUST00000078409 E2f5Q61502 335 aa12.59□□□□□ -0.39
Trim61-201ENSMUST00000078409 Ppfia2Q8BSS9 1257 aa12.59□□□□□ -0.39
Trim61-201ENSMUST00000078409 Ulbp1Q8HWA3 334 aa12.59□□□□□ -0.39
Trim61-201ENSMUST00000078409 Fam184aE9PW83 1143 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Tmtc2Q56A06 836 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Ppme1Q8BVQ5 386 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 St5Q924W7 1134 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Stk31Q99MW1 1018 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Irx4Q9QY61 515 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Spryd3E9Q9B3 442 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Trim55G3X8Y1 545 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Hap1O35668 628 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 SlkO54988 1233 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 ClgnP52194 611 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Zc3h15Q3TIV5 426 aaKnown RBP12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Map3k9Q3U1V8 1077 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Gm12185Q5NCB2 835 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Sin3aQ60520 1274 aaKnown RBP12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Unc45aQ99KD5 944 aa12.58□□□□□ -0.4
Trim61-201ENSMUST00000078409 Snap23O09044 210 aa12.57□□□□□ -0.4
Trim61-201ENSMUST00000078409 Magea8O89012 320 aa12.57□□□□□ -0.4
Trim61-201ENSMUST00000078409 Tbc1d2bQ3U0J8 965 aa12.57□□□□□ -0.4
Trim61-201ENSMUST00000078409 Cc2d1bQ8BRN9 848 aa12.57□□□□□ -0.4
Trim61-201ENSMUST00000078409 Rgs19Q9CX84 216 aa12.57□□□□□ -0.4
Trim61-201ENSMUST00000078409 Polr3cQ9D483 533 aa12.57□□□□□ -0.4
Trim61-201ENSMUST00000078409 Ccdc39Q9D5Y1 937 aa12.57□□□□□ -0.4
Trim61-201ENSMUST00000078409 U2af2P26369 475 aaKnown RBP12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 TmpoQ61033 693 aaKnown RBP12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 CrebzfQ91ZR3 358 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Gigyf1Q99MR1 1044 aaKnown RBP12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Swt1Q9DBQ9 907 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Col4a1P02463 1669 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Golgb1E9PVZ8 3238 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Atp2b1G5E829 1220 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Psmc1P62192 440 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Esco1Q69Z69 843 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Kdm4cQ8VCD7 1054 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Ttc5Q99LG4 440 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Syap1Q9D5V6 365 aa12.56□□□□□ -0.4
Trim61-201ENSMUST00000078409 Flt1P35969 1333 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 Ccdc112A0AUP1 442 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 Lrch1P62046 709 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 Rasa3Q60790 834 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 Cgnl1Q6AW69 1298 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 Znf24Q91VN1 368 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 Tbc1d7Q9D0K0 293 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 Ptf1aQ9QX98 324 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 P2rx7Q9Z1M0 595 aa12.55□□□□□ -0.4
Trim61-201ENSMUST00000078409 Nap1l2P51860 460 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Inf2Q0GNC1 1273 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Slf2Q6P9P0 1278 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Ppp1r9bQ6R891 817 aaKnown RBP12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Znf428Q8C1M2 176 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 4930519G04RikQ9CPT7 205 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Rwdd1Q9CQK7 243 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 MvpQ9EQK5 861 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 AfdnQ9QZQ1 1820 aaKnown RBP12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Duox1A2AQ92 1551 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 CgnP59242 1191 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Epas1P97481 874 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Fhdc1Q3ULZ2 1149 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Klra6Q60653 266 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Atp2b4Q6Q477 1205 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 Jade2Q6ZQF7 829 aa12.54□□□□□ -0.4
Trim61-201ENSMUST00000078409 SowahdQ8BY98 327 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms