RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Cyp7a1Q64505 503 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Arid5bQ8BM75 1188 aaKnown RBP8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Mylk2Q8VCR8 613 aa8.43□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tnrc6cQ3UHC0 1690 aaKnown RBP8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 GakQ99KY4 1305 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ppfia1B2RXQ2 1266 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Cops6O88545 324 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Lmbrd2Q8C561 694 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Rapgef4Q9EQZ6 1011 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 IncenpQ9WU62 880 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Zscan29E9Q5B4 869 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Nap1l3Q794H2 544 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Zfp397Q7TNK4 527 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Sgsm2Q80U12 1005 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Smc4Q8CG47 1286 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 NaspQ99MD9 773 aaKnown RBP8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Fam114a1Q9D281 569 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 TnmdQ9EP64 317 aa8.42□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Nav1Q8CH77 1875 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ugt1a5B2RT14 529 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Mctp1E9PV86 951 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Gpr182P43142 395 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Kcnq3Q8K3F6 873 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Adam1bQ8R534 806 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ccne2Q9Z238 404 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Shank3Q4ACU6 1730 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Samd1D3YXK1 519 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Eya2O08575 532 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Sh3bp1P55194 680 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ppfia3P60469 1194 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Gnl3lQ6PGG6 577 aaKnown RBP8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tsen34Q8BMZ5 316 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tmc2Q8R4P4 888 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 4930548H24RikQ9D496 437 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Shank2Q80Z38 1476 aa8.41□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Rbm8a2A0A0N4SUH6 174 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 1700006A11RikB9EHI3 544 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Sp8Q8BMJ8 486 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ddx41Q91VN6 622 aaKnown RBP8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Rbm8aQ9CWZ3 174 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Prl3d2F6R3P9 224 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Pde4dQ01063 747 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Esco1Q69Z69 843 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ddx11Q6AXC6 880 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Susd4Q8BH32 490 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Me3Q8BMF3 604 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Zkscan8Q8BSL0 588 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ptcd1Q8C2E4 695 aaKnown RBP8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 SnrkQ8VDU5 748 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Polr3dQ91WD1 398 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Tktl2Q9D4D4 627 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Ak2Q9WTP6 239 aa8.4□□□□□ -1.06
Clrn1-202ENSMUST00000055636 Mtx1P47802 317 aa8.4□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ifit1bl2Q3U687 466 aa8.4□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ubash3aQ3V3E1 624 aa8.4□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ube2oQ6ZPJ3 1288 aa8.4□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ercc6lQ8BHK9 1240 aa8.4□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Rbm17Q8JZX4 405 aaKnown RBP8.4□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Sh3bp5Q9Z131 463 aa8.4□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Aox1O54754 1333 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Nwd2Q6P5U7 1742 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Marf1Q8BJ34 1730 aaKnown RBP8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ssc5dQ8BV57 1371 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Slc4a1P04919 929 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Slurp2P0DP59 97 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ftl2P49945 183 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 FanccP50652 591 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Irx2P81066 474 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Smarcc1P97496 1104 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Gtpbp6Q3U6U5 514 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 NfkbibQ60778 359 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Rassf8Q8CJ96 419 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Plcd1Q8R3B1 756 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ehd4Q9EQP2 541 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Syt10Q9R0N4 523 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Aox4Q3TYQ9 1336 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ctdnep1Q3TP92 244 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 CenpqQ9CPQ5 267 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Bloc1s2Q9CWG9 143 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Hmgn5Q9JL35 406 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Cnpy2Q9QXT0 182 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Atp8b3Q6UQ17 1335 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ubn2Q80WC1 1314 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Fer1l6E0CZ42 1862 aa8.39□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Gm13023A2A8N2 498 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Bin2D3Z6Q9 489 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Cyp2d10P24456 504 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Ubxn10Q8BG34 277 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Sugp2Q8CH09 1067 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Bmp2kQ91Z96 1138 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 NgdnQ9DB96 315 aaKnown RBP8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Mybbp1aQ7TPV4 1344 aaKnown RBP8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 1700113H08RikE9Q9Q5 327 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Taf3Q5HZG4 932 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Cep135Q6P5D4 1140 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 RbsnQ80Y56 783 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Sept12Q9D451 317 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Itga6Q61739 1091 aa8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Srp68Q8BMA6 625 aaKnown RBP8.38□□□□□ -1.07
Clrn1-202ENSMUST00000055636 Dnaaf2Q8BPI1 814 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms