RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Q8C6G1 249 aa27.42■■□□□ 1.98
Upf3a-201ENSMUST00000043767 OscarQ8VBT3 265 aa27.42■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Fhdc1Q3ULZ2 1149 aa27.42■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Ifit2Q64112 472 aa27.42■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Irs4Q9Z0Y7 1216 aa27.42■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Edrf1Q6GQV7 1239 aa27.41■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Lmbrd2Q8C561 694 aa27.41■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Sept12Q9D451 317 aa27.41■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Sytl4Q9R0Q1 673 aa27.41■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Mroh6V9GX81 722 aa27.4■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Slfn1Q9Z0I7 337 aa27.4■■□□□ 1.98
Upf3a-201ENSMUST00000043767 GapdhsQ64467 440 aa27.39■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Ubxn10Q8BG34 277 aa27.39■■□□□ 1.98
Upf3a-201ENSMUST00000043767 StrbpQ91WM1 672 aaKnown RBP27.39■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Ankrd63A2ARS0 390 aa27.39■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Ell2Q3UKU1 639 aa27.39■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Ube3cQ80U95 1083 aa27.39■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Ppp4r3bQ922R5 820 aa27.39■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Pcsk7Q61139 770 aa27.38■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Ssh1Q76I79 1042 aa27.38■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Nek11Q8C0Q4 628 aa27.38■■□□□ 1.97
Upf3a-201ENSMUST00000043767 MccE9PWI3 1003 aa27.37■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Isy1Q69ZQ2 285 aaKnown RBP27.37■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Dnttip2Q8R2M2 758 aaKnown RBP27.37■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Pla2g4fQ50L41 855 aa27.37■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Nme8Q715T0 586 aa27.37■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Erc1Q99MI1 1120 aa27.37■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Ak2Q9WTP6 239 aa27.37■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Rbm8a2A0A0N4SUH6 174 aa27.36■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Trim56Q80VI1 734 aaKnown RBP27.36■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Rbm8aQ9CWZ3 174 aa27.36■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Slc51aQ8R000 340 aa27.36■■□□□ 1.97
Upf3a-201ENSMUST00000043767 HdlbpQ8VDJ3 1268 aaKnown RBP27.36■■□□□ 1.97
Upf3a-201ENSMUST00000043767 UvssaQ9D479 717 aa27.36■■□□□ 1.97
Upf3a-201ENSMUST00000043767 PhaxQ9JJT9 385 aaKnown RBP27.36■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Il17raQ60943 864 aa27.35■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Mrps27Q8BK72 415 aaKnown RBP27.35■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Ugt1a5B2RT14 529 aa27.34■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Izumo3A6PWV3 263 aa27.33■■□□□ 1.97
Upf3a-201ENSMUST00000043767 1700010I14RikQ7TPG0 532 aa27.33■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Ptcd1Q8C2E4 695 aaKnown RBP27.33■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Myh15E9Q264 1925 aa27.33■■□□□ 1.97
Upf3a-201ENSMUST00000043767 Glg1Q61543 1175 aaKnown RBP27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Rbm15bQ6PHZ5 887 aaKnown RBP27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Myh4Q5SX39 1939 aa27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Bend4P86174 541 aa27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Rsph3aQ3UFY4 516 aa27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Gtf2a1Q99PM3 378 aa27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Kcnn1Q9EQR3 537 aa27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Add2Q9QYB8 725 aa27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Tbc1d8Q9Z1A9 1134 aa27.32■■□□□ 1.96
Upf3a-201ENSMUST00000043767 PnnO35691 725 aaKnown RBP27.31■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Anapc15P60007 132 aa27.31■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Mapkapk5O54992 473 aa27.31■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Cyp2d9P11714 504 aa27.31■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Fchsd1Q6PFY1 688 aa27.31■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Kdm4cQ8VCD7 1054 aa27.31■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Appbp2Q9DAX9 585 aa27.31■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Phrf1A6H619 1682 aa27.3■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Zbtb7aO88939 569 aaKnown RBP27.3■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Fam83bQ0VBM2 1012 aa27.3■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Ccdc51Q3URS9 406 aa27.3■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Kank4Q6P9J5 1016 aa27.3■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Lrrfip2Q91WK0 415 aa27.3■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Trpc5Q9QX29 975 aa27.3■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Gdf11Q9Z1W4 405 aa27.3■■□□□ 1.96
Upf3a-201ENSMUST00000043767 FliiQ9JJ28 1271 aa27.29■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Letm1Q9Z2I0 738 aa27.29■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Zswim8Q3UHH1 1832 aaKnown RBP27.29■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Mtcl1Q3UHU5 1945 aa27.29■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Gm5592Q3V0A6 857 aa27.29■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Lmod1Q8BVA4 595 aa27.29■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Phactr2B1AVP0 632 aa27.28■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Ddit3P35639 168 aa27.28■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Slc7a3P70423 618 aa27.28■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Myh7Q91Z83 1935 aa27.28■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Hspd1P63038 573 aaKnown RBP27.28■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Ppp1r21Q3TDD9 780 aa27.28■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Kcnq3Q8K3F6 873 aa27.28■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Nup188Q6ZQH8 1759 aa27.27■■□□□ 1.96
Upf3a-201ENSMUST00000043767 A0A1W2P7S8 802 aa27.27■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Stat5bP42232 786 aa27.27■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Cdc5lQ6A068 802 aaKnown RBP27.27■■□□□ 1.96
Upf3a-201ENSMUST00000043767 IcoslgQ9JHJ8 322 aa27.27■■□□□ 1.96
Upf3a-201ENSMUST00000043767 Myh3P13541 1940 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Chrna5Q2MKA5 467 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Best3Q6H1V1 669 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 AidaQ8C4Q6 305 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 LlphQ9D945 130 aaKnown RBP27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Ltn1Q6A009 1767 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Siah1aP61092 282 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 IarsQ8BU30 1262 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Tango6Q8C3S2 1079 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Polr3dQ91WD1 398 aa27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Mrpl12Q9DB15 201 aaKnown RBP27.26■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Spryd3E9Q9B3 442 aa27.25■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Prl7d1P04769 244 aa27.25■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Cyp27a1Q9DBG1 533 aa27.25■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Krt24A1L317 512 aa27.25■■□□□ 1.95
Upf3a-201ENSMUST00000043767 RubcnlQ3TD16 648 aa27.25■■□□□ 1.95
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms