RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SLC25A19Q9HC21 320 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 KRT84Q9NSB2 600 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 C1orf123Q9NWV4 160 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 RNF7Q9UBF6 113 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 POLR3KQ9Y2Y1 108 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 hCG_1807616A0A1W2PRN6 198 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 LYNP07948 512 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 EPHA2P29317 976 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 CD80P33681 288 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 NAA10P41227 235 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 ZNF121P58317 390 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 MZT1Q08AG7 82 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 KPNB1Q14974 876 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 OR8B8Q15620 311 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 LYPD2Q6UXB3 125 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 C12orf54Q6X4T0 127 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 RBMS3Q6XE24 437 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 USP43Q70EL4 1123 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 SLC16A9Q7RTY1 509 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 ZDHHC13Q8IUH4 622 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 ZFAND2BQ8WV99 257 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 RNF133Q8WVZ7 376 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 SGK3Q96BR1 496 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 PGAM5Q96HS1 289 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 OR10A2Q9H208 303 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 C14orf119Q9NWQ9 140 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 CLN8Q9UBY8 286 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 NUP50Q9UKX7 468 aa10.62□□□□□ -0.71
NPLOC4-213ENST00000573519 IGHV3OR16-10A0A075B7F0 116 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 SAC3D1A6NKF1 404 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 PRODHO43272 600 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 PRKYO43930 277 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 FSHBP01225 129 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 FCGR1AP12314 374 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 CPT2P23786 658 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 OPRL1P41146 370 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 HCCSP53701 268 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 FAM3AP98173 230 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 APOFQ13790 326 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 PTGES3Q15185 160 aaKnown RBP10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 KCNJ8Q15842 424 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 LRRN1Q6UXK5 716 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 DCDC5Q6ZRR9 648 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 ZNF826PQ6ZT77 177 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 BCDIN3DQ7Z5W3 292 aaKnown RBP10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 PARP8Q8N3A8 854 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 SPERTQ8NA61 448 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 OR52H1Q8NGJ2 320 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 OTOSQ8NHW6 89 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 DNAJC9Q8WXX5 260 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 SPSB4Q96A44 273 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 TECTBQ96PL2 329 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 MARCH7Q9H992 704 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 OAZ3Q9UMX2 235 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 KLHDC2Q9Y2U9 406 aa10.61□□□□□ -0.71
NPLOC4-213ENST00000573519 FBN3Q75N90 2809 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 IGHV2-70DA0A0C4DH43 119 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 CCDC182A6NF36 153 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 EBAG9O00559 213 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 FSTL3O95633 263 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 MRPL3P09001 348 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 SLC2A5P22732 501 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 CFL1P23528 166 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 POLR2IP36954 125 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 GNALP38405 381 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 DDOSTP39656 456 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 GSK3AP49840 483 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 ACTR3P61158 418 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 ESRRGP62508 458 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 KLF17Q5JT82 389 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 KDM4DQ6B0I6 523 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 SIGLECL1Q8N7X8 197 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 ZNF454Q8N9F8 522 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 PLPP7Q8NBV4 271 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 FAM216AQ8WUB2 273 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 RAB40AQ8WXH6 277 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 GCDHQ92947 438 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 CENPNQ96H22 339 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 CIB1Q99828 191 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 PKP2Q99959 881 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 NUDT16L1Q9BRJ7 211 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 PAPOLGQ9BWT3 736 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 MS4A7Q9GZW8 240 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 GABARAPL1Q9H0R8 117 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 ZNF69Q9UC07 566 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 LAMP5Q9UJQ1 280 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 STAB1Q9NY15 2570 aa10.6□□□□□ -0.71
NPLOC4-213ENST00000573519 TRAV38-1A0A0B4J264 116 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 hCG_38984A0A1B0GV85 526 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 OOEPA6NGQ2 149 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 H3BNX3 289 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 LGALS8O00214 317 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 ADAM20O43506 726 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 PTBP3O95758 552 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 GYPAP02724 150 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 PAX8Q06710 450 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 POU4F2Q12837 409 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 SLC35D3Q5M8T2 416 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 SLX4IPQ5VYV7 408 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms