RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TMEM196Q5HYL7 178 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 ARMC6Q6NXE6 501 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 ETV3LQ6ZN32 361 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 OR56B1Q8NGI3 324 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 OR1J1Q8NGS3 322 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 OR2I1PQ8NGU4 316 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 OR13G1Q8NGZ3 307 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 PTPMT1Q8WUK0 201 aaPredicted RBP15.74■□□□□ 0.11
NUP54-205ENST00000507257 ASB10Q8WXI3 467 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 ADOQ96SZ5 270 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 RTN4RQ9BZR6 473 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 PLEKHA2Q9HB19 425 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 C1orf123Q9NWV4 160 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 SUSD2Q9UGT4 822 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 COL5A1P20908 1838 aaPredicted RBP15.74■□□□□ 0.11
NUP54-205ENST00000507257 LOC101059948A0A1B0GTJ6 334 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 K7EPK0 472 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 SEC11BP0C7V7 166 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 SQSTM1Q13501 440 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 HIST2H3AQ71DI3 136 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 COX15Q7KZN9 410 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 GRINAQ7Z429 371 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 GKN2Q86XP6 184 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 YAF2Q8IY57 180 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 FAM71E2Q8N5Q1 922 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 ZNF248Q8NDW4 579 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 KCNK17Q96T54 332 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 MESP1Q9BRJ9 268 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 NICN1Q9BSH3 213 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 PBOV1Q9GZY1 135 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 CRISPLD2Q9H0B8 497 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 FBXL17Q9UF56 701 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 B3GALT5Q9Y2C3 310 aa15.74■□□□□ 0.11
NUP54-205ENST00000507257 A6NLC8 198 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 ZNF729A6NN14 1252 aaPredicted RBP15.73■□□□□ 0.11
NUP54-205ENST00000507257 FTCDNL1E5RQL4 147 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 H0YIG0 161 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 PPIHO43447 177 aaKnown RBP15.73■□□□□ 0.11
NUP54-205ENST00000507257 TSPAN2O60636 221 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 CDC14BO60729 498 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 DEDDO75618 318 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 TSPAN15O95858 294 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 IGKV3-11P04433 115 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 LMO1P25800 156 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 HAAOP46952 286 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 RAB5CP51148 216 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 DAP3P51398 398 aaKnown RBP15.73■□□□□ 0.11
NUP54-205ENST00000507257 TMEM50BP56557 158 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 SPEM2Q0P670 501 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 KLHL24Q6TFL4 600 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 ZNF101Q8IZC7 436 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 AVL9Q8NBF6 648 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 SNIP1Q8TAD8 396 aaKnown RBP15.73■□□□□ 0.11
NUP54-205ENST00000507257 SMDT1Q9H4I9 107 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 PISDQ9UG56 409 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 MRPS28Q9Y2Q9 187 aaKnown RBP15.73■□□□□ 0.11
NUP54-205ENST00000507257 AMDHD2Q9Y303 409 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 MMACHCQ9Y4U1 282 aa15.73■□□□□ 0.11
NUP54-205ENST00000507257 A0A1B0GW64 132 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 AGPAT2O15120 278 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 CA11O75493 328 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 TNFP01375 233 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 FCGR2CP31995 323 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 S100A10P60903 97 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 GUK1Q16774 197 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 DEFB115Q30KQ5 88 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 GLIPR1L1Q6UWM5 242 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 DBX2Q6ZNG2 339 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 OR13C9Q8NGT0 318 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 INTS12Q96CB8 462 aaKnown RBP15.72■□□□□ 0.11
NUP54-205ENST00000507257 BCL2L14Q9BZR8 327 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 PRKNO60260 465 aaPredicted RBP15.72■□□□□ 0.11
NUP54-205ENST00000507257 SNRNP70P08621 437 aaKnown RBP15.72■□□□□ 0.11
NUP54-205ENST00000507257 DANCRP0C864 163 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 AMY2BP19961 511 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 LINC00346Q8IVM7 164 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 FAM89BQ8N5H3 189 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 CAPNS2Q96L46 248 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 PRRX2Q99811 253 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 URM1Q9BTM9 101 aaKnown RBP15.72■□□□□ 0.11
NUP54-205ENST00000507257 TMEM59Q9BXS4 323 aa15.72■□□□□ 0.11
NUP54-205ENST00000507257 A0A1W2PPH5 198 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 A0A1W2PQF6 199 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 SOCS1O15524 211 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 IFNA17P01571 189 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 IL12BP29460 328 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 OR3A2P47893 321 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 HTR5AP47898 357 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 ACER2Q5QJU3 275 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 POMZP3Q6PJE2 187 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 TMPRSS9Q7Z410 1059 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 ZNF761Q86XN6 746 aaPredicted RBP15.71■□□□□ 0.11
NUP54-205ENST00000507257 OR5AS1Q8N127 324 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 ZNF321PQ8N8H1 164 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 WDSUB1Q8N9V3 476 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 SLAMF6Q96DU3 332 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 TCTN2Q96GX1 697 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 PAPOLGQ9BWT3 736 aaKnown RBP15.71■□□□□ 0.11
NUP54-205ENST00000507257 CHRDQ9H2X0 955 aa15.71■□□□□ 0.11
NUP54-205ENST00000507257 LUZP4Q9P127 313 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms