RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 ERGIC1Q969X5 290 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 PARD6AQ9NPB6 346 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 TAS2R4Q9NYW5 299 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 LRFN1Q9P244 771 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 TUBD1Q9UJT1 453 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 Q9Y3F1 56 aa12.32□□□□□ -0.44
HDAC1-206ENST00000476391 NPIPA5A0A0B4J1W7 369 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 A0A1W2PPV9 198 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 NPIPA7E9PJI5 369 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 HSPB1P04792 205 aaKnown RBP12.31□□□□□ -0.44
HDAC1-206ENST00000476391 NPIPA8P0DM63 369 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 THPOP40225 353 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 TMEM184AQ6ZMB5 413 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 ZNF550Q7Z398 422 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 CHST4Q8NCG5 386 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 OR13C3Q8NGS6 347 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 OR6N2Q8NGY6 317 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 NKD1Q969G9 470 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 TSSK2Q96PF2 358 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 GAL3ST4Q96RP7 486 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 NUDT16L1Q9BRJ7 211 aaKnown RBP12.31□□□□□ -0.44
HDAC1-206ENST00000476391 TM7SF3Q9NS93 570 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 SLC25A13Q9UJS0 675 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 ZNF346Q9UL40 294 aaKnown RBP12.31□□□□□ -0.44
HDAC1-206ENST00000476391 CYP8B1Q9UNU6 501 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 DCDC2BA2VCK2 349 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 A6NNC1 897 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 CLDN34H7C241 214 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 OR4A8P0C604 315 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 KLK2P20151 261 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 TLX1P31314 330 aaPredicted RBP12.31□□□□□ -0.44
HDAC1-206ENST00000476391 RPS4XP62701 263 aaKnown RBP12.31□□□□□ -0.44
HDAC1-206ENST00000476391 RBX1P62877 108 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 GABREP78334 506 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 IAH1Q2TAA2 248 aaPredicted RBP12.31□□□□□ -0.44
HDAC1-206ENST00000476391 AADACL3Q5VUY0 350 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 TEX38Q6PEX7 206 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 ULK3Q6PHR2 472 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 ZNF547Q8IVP9 402 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 COX18Q8N8Q8 333 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 DNASE2BQ8WZ79 361 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 THOC3Q96J01 351 aaKnown RBP12.31□□□□□ -0.44
HDAC1-206ENST00000476391 RTBDNQ9BSG5 229 aaPredicted RBP12.31□□□□□ -0.44
HDAC1-206ENST00000476391 CAPN10Q9HC96 672 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 DOCK3Q8IZD9 2030 aa12.31□□□□□ -0.44
HDAC1-206ENST00000476391 SCAF4O95104 1147 aaKnown RBP12.3□□□□□ -0.44
HDAC1-206ENST00000476391 SOD2P04179 222 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 GIMD1P0DJR0 217 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 CCKARP32238 428 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 PDLIM4P50479 330 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 RND3P61587 244 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 CST9Q5W186 159 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 FCRL6Q6DN72 434 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 POMZP3Q6PJE2 187 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 KIRREL2Q6UWL6 708 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 DPY19L4Q7Z388 723 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 TMEM156Q8N614 296 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 NKAIN3Q8N8D7 197 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 NOXO1Q8NFA2 376 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 OR10A7Q8NGE5 316 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 OR4X1Q8NH49 305 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 ARSGQ96EG1 525 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 ZPBPQ9BS86 351 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 LPAR2Q9HBW0 351 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 FBXO34Q9NWN3 711 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 SEMA5BQ9P283 1151 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 A0A1W2PPQ1 181 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 E5RGE8 158 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 ACAA2P42765 397 aaKnown RBP12.3□□□□□ -0.44
HDAC1-206ENST00000476391 HLA-DRB3P79483 266 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 METRNLQ641Q3 311 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 NCR3LG1Q68D85 454 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 CSNK1A1LQ8N752 337 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 STT3BQ8TCJ2 826 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 COL26A1Q96A83 441 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 TMEM18Q96B42 140 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 SLC25A44Q96H78 314 aaPredicted RBP12.3□□□□□ -0.44
HDAC1-206ENST00000476391 HHIPL1Q96JK4 782 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 URM1Q9BTM9 101 aaKnown RBP12.3□□□□□ -0.44
HDAC1-206ENST00000476391 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 C1orf123Q9NWV4 160 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 ANAPC10Q9UM13 185 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 GPR34Q9UPC5 381 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 NSG2Q9Y328 171 aa12.3□□□□□ -0.44
HDAC1-206ENST00000476391 A6NIZ1 184 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 DHRS7CA6NNS2 312 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 PPP5D1E7EU14 171 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 SOX8P57073 446 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 RAP1BP61224 184 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 PNRC1Q12796 327 aaPredicted RBP12.29□□□□□ -0.44
HDAC1-206ENST00000476391 OR52N4Q8NGI2 321 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 RHBDD1Q8TEB9 315 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 CMBLQ96DG6 245 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 ACY3Q96HD9 319 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 IGSF21Q96ID5 467 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 NRTNQ99748 197 aa12.29□□□□□ -0.44
HDAC1-206ENST00000476391 ANGPTL4Q9BY76 406 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms