RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SERPINB7O75635 380 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 GATBO75879 557 aaKnown RBP0.25□□□□□ -2.37
FOXN3-216ENST00000557496 TMEM50AO95807 157 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 IGHV1-46P01743 117 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 DBTP11182 482 aaKnown RBP0.25□□□□□ -2.37
FOXN3-216ENST00000557496 GGT1P19440 569 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 FOXA1P55317 472 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 MRPS22P82650 360 aaKnown RBP0.25□□□□□ -2.37
FOXN3-216ENST00000557496 ZNF726P1Q15940 193 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 NADK2Q4G0N4 442 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 CCDC92Q53HC0 331 aaPredicted RBP0.25□□□□□ -2.37
FOXN3-216ENST00000557496 MS4A15Q8N5U1 240 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 DEFB119Q8N690 84 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 OR1L1Q8NH94 360 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 OTUB2Q96DC9 234 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 MICU1Q9BPX6 476 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 PDCD1LG2Q9BQ51 273 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 POLE3Q9NRF9 147 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 ETNK2Q9NVF9 386 aa0.25□□□□□ -2.37
FOXN3-216ENST00000557496 DENND4AQ7Z401 1863 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 COL4A1P02462 1669 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 SPATA31E1Q6ZUB1 1445 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 SMIM26A0A096LP01 95 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 TRGV4A0A0C4DH28 118 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 IGKV2-29A2NJV5 120 aaPredicted RBP0.24□□□□□ -2.37
FOXN3-216ENST00000557496 LRRIQ3A6PVS8 624 aaPredicted RBP0.24□□□□□ -2.37
FOXN3-216ENST00000557496 HAS3O00219 553 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 TAAR5O14804 337 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 S1PR2O95136 353 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 MT-ND4P03905 459 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 POLR2IP36954 125 aaKnown RBP0.24□□□□□ -2.37
FOXN3-216ENST00000557496 RPS23P62266 143 aaKnown RBP0.24□□□□□ -2.37
FOXN3-216ENST00000557496 FGL1Q08830 312 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 ILKQ13418 452 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 NCF4Q15080 339 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 SS18Q15532 418 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 LDLRAD2Q5SZI1 272 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 GPR107Q5VW38 600 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 CNSTQ6PJW8 725 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 H2BFWTQ7Z2G1 175 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 EFL1Q7Z2Z2 1120 aaKnown RBP0.24□□□□□ -2.37
FOXN3-216ENST00000557496 CHST4Q8NCG5 386 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 OR2T34Q8NGX1 318 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 TMEM243Q9BU79 118 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 TMEM9BQ9NQ34 198 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 TAS2R3Q9NYW6 316 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 PTBP2Q9UKA9 531 aaKnown RBP0.24□□□□□ -2.37
FOXN3-216ENST00000557496 LRRC42Q9Y546 428 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 C2orf16Q68DN1 1984 aa0.24□□□□□ -2.37
FOXN3-216ENST00000557496 LOXHD1Q8IVV2 1947 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 TIMM8AO60220 97 aaPredicted RBP0.23□□□□□ -2.37
FOXN3-216ENST00000557496 CDC40O60508 579 aaKnown RBP eCLIP0.23□□□□□ -2.37
FOXN3-216ENST00000557496 CDS2O95674 445 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 CLIC3O95833 236 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 U2AF2P26368 475 aaKnown RBP eCLIP0.23□□□□□ -2.372e-12■■■□□ 14.7
FOXN3-216ENST00000557496 TALDO1P37837 337 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 SSR1P43307 286 aaKnown RBP0.23□□□□□ -2.37
FOXN3-216ENST00000557496 HTD2P86397 168 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 EXOC3L2Q2M3D2 409 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 LIN9Q5TKA1 542 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 PAGE2Q7Z2X7 111 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 TICAM2Q86XR7 235 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 OR1L6Q8NGR2 347 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 RNASE11Q8TAA1 199 aaKnown RBP0.23□□□□□ -2.37
FOXN3-216ENST00000557496 ZNF606Q8WXB4 792 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 GHSRQ92847 366 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 RAB33BQ9H082 229 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 NT5MQ9NPB1 228 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 MED4Q9NPJ6 270 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 FBXO8Q9NRD0 319 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 LSM7Q9UK45 103 aaKnown RBP0.23□□□□□ -2.37
FOXN3-216ENST00000557496 STRCP1A6NGW2 1772 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 NUP205Q92621 2012 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 DOCK6Q96HP0 2047 aa0.23□□□□□ -2.37
FOXN3-216ENST00000557496 ATG2BQ96BY7 2078 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 SNTNA6NMZ2 147 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 PDZK1P1A8MUH7 402 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 A8MWL6 223 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 TSPAN12O95859 305 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 IGHMP01871 453 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 HSPD1P10809 573 aaKnown RBP0.22□□□□□ -2.37
FOXN3-216ENST00000557496 ATP1B2P14415 290 aaPredicted RBP0.22□□□□□ -2.37
FOXN3-216ENST00000557496 PRKACBP22694 351 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 IFNA8P32881 189 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 CDH6P55285 790 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 KCNJ2P63252 427 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 UBE2UQ5VVX9 321 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 FAM104BQ5XKR9 115 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 GPR26Q8NDV2 337 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 OR1L4Q8NGR5 311 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 PLPPR1Q8TBJ4 325 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 TMEM230Q96A57 120 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 DYRK4Q9NR20 520 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 NUP50Q9UKX7 468 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 FARSAQ9Y285 508 aaKnown RBP0.22□□□□□ -2.37
FOXN3-216ENST00000557496 PLXNA3P51805 1871 aa0.22□□□□□ -2.37
FOXN3-216ENST00000557496 SSH2Q76I76 1423 aa0.21□□□□□ -2.38
FOXN3-216ENST00000557496 IGKV1-27A0A075B6S5 117 aa0.21□□□□□ -2.38
FOXN3-216ENST00000557496 A0A1B0GVL5 298 aa0.21□□□□□ -2.38
FOXN3-216ENST00000557496 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms