RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 NPIPB4C9JG80 1138 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 TNFRSF10AO00220 468 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 ETV2O00321 342 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 HRGP04196 525 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 ENPP1P22413 925 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 MMP16P51512 607 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 P2RY4P51582 365 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 GRK1Q15835 563 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 MRPL14Q6P1L8 145 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 MUC20Q8N307 709 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 GALNT16Q8N428 558 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 SPICQ8N5J4 248 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 OR4K17Q8NGC6 315 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 OR52N4Q8NGI2 321 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 CMBLQ96DG6 245 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 PBOV1Q9GZY1 135 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 EXO5Q9H790 373 aa16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 C19orf25Q9UFG5 118 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-201ENST00000291842 TMEM235A6NFC5 223 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 SNRPGP15A8MWD9 76 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 MASP2O00187 686 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 SYT7O43581 403 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 UBCP0CG48 685 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 ANOS1P23352 680 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 MECP2P51608 486 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 PRKXP51817 358 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 PMPCAQ10713 525 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 EXOSC2Q13868 293 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 SLC25A53Q5H9E4 307 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 B3GNTL1Q67FW5 361 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 DEGS2Q6QHC5 323 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 OR6N1Q8NGY5 312 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 SOX7Q9BT81 388 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 TINAGL1Q9GZM7 467 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 CLEC4MQ9H2X3 399 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 C1orf198Q9H425 327 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 LHFPL6Q9Y693 200 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 SDK2Q58EX2 2172 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 MEGF11A6BM72 1044 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 G3V3Y1 287 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 CSN2P05814 226 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 PGA4P0DJD7 388 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 PGA3P0DJD8 388 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 GABRA1P14867 456 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 THEM4Q5T1C6 240 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 CHMP1BQ7LBR1 199 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 SPACA5Q96QH8 159 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 TMEM138Q9NPI0 162 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 B3GNT2Q9NY97 397 aa16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 GDF2Q9UK05 429 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 FARSAQ9Y285 508 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-201ENST00000291842 LEUTXA8MZ59 168 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 TRAF3IP2O43734 574 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 RAB3DO95716 219 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 LPLP06858 475 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 H2BFSP57053 126 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 C4orf46Q504U0 113 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 RNF144BQ7Z419 303 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 NOXO1Q8NFA2 376 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 OR1J2Q8NGS2 313 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 OR51E1Q8TCB6 317 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 CDX2Q99626 313 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 KLHL13Q9P2N7 655 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 CHCHD2Q9Y6H1 151 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 IGLV3-32A0A0A0MS00 114 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 LDLRAD4O15165 306 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 IGHG1P01857 330 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 GIPP09681 153 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 CCL4P13236 92 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 CXCL2P19875 107 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 ACTBP60709 375 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 ACTG1P63261 375 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 PCOLCEQ15113 449 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 ZNF813Q6ZN06 617 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 COMMD2Q86X83 199 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 OR4S1Q8NGB4 309 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 OR13C9Q8NGT0 318 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 ELMOD3Q96FG2 381 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 ASH2LQ9UBL3 628 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 RHBDD3Q9Y3P4 386 aa16.3■□□□□ 0.2
SHKBP1-201ENST00000291842 UBE2QL1A1L167 161 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 OR2M5A3KFT3 312 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 GOSR2O14653 212 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 RER1O15258 196 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 DKK1O94907 266 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 BDKRB2P30411 391 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 DMRTC1Q5HYR2 192 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 C1orf100Q5SVJ3 147 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 DCAF12L2Q5VW00 463 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 TMED4Q7Z7H5 227 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 LYPD6Q86Y78 171 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 ELMOD2Q8IZ81 293 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 ELP5Q8TE02 316 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 MR1Q95460 341 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 SLC26A1Q9H2B4 701 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 POFUT1Q9H488 388 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 FANCFQ9NPI8 374 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 B3GALT1Q9Y5Z6 326 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 WIPF3A6NGB9 483 aa16.29■□□□□ 0.2
SHKBP1-201ENST00000291842 M0R233 179 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms