RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Sox7P40646 380 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Nkx2-6P43688 289 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Rps11P62281 158 aaKnown RBP13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Rps15P62843 145 aaKnown RBP13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 MeikinQ5F2C3 434 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Arhgef4Q7TNR9 484 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Slc30a8Q8BGG0 367 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Adgrg7Q8BM96 785 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Cpne5Q8JZW4 593 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Ocel1Q8VCR9 219 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Pop4Q9CR08 221 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 NubplQ9CWD8 319 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Fbxo6Q9QZN4 295 aa13.26□□□□□ -0.29
Nup88-202ENSMUST00000108530 Gpr155A2AWR3 868 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Vmn2r49D3Z6L3 852 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Vmn1r167G3UW71 315 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Vmn2r32K7N686 852 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Tmem178bM0QWJ9 172 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Vmn2r42O35192 852 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 GnrhrQ01776 327 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Btg2Q04211 158 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Bcap31Q61335 245 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 SordQ64442 357 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr1287Q7TQY1 305 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 TecrlQ8BFZ1 361 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Fbxl2Q8BH16 423 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Fate1Q8CEK7 99 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Asb15Q8VHS6 583 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Fam122cQ9D5J5 180 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Dda1Q9D9Z5 102 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Thsd1Q9JM61 851 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Creb3l1Q9Z125 519 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Spta1P08032 2415 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Gm13762A2ATG2 311 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr1224-ps1A3KGY4 311 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Mn1D3YWE6 1297 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr172E9Q8F6 309 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Chst3O88199 472 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 ApelaP0DMC4 54 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Nrsn1P97799 196 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Slc35f3Q1LZI2 421 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 EdnraQ61614 427 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 BckdhbQ6P3A8 390 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr1281Q7TQY6 305 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr201Q7TS38 308 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 BtlaQ7TSA3 306 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Rdh10Q8VCH7 341 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr1491Q8VEZ5 319 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Ogfod3Q9D136 315 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Serinc1Q9QZI8 453 aa13.25□□□□□ -0.29
Nup88-202ENSMUST00000108530 Pramef6A2A8M8 474 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Gsg1lD3Z7H4 322 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr597L7N224 315 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Csf1P07141 552 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Alox5apP30355 161 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 HfeP70387 359 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 CrhbpQ60571 322 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 St8sia4Q64692 359 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Scgb1c1Q7M742 95 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Trmt61aQ80XC2 290 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Stk35Q80ZW0 539 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Rspo4Q8BJ73 228 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Entpd8Q8K0L2 497 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Tm4sf5Q91XF2 196 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Arl4dQ99PE9 201 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Q9CQM1 111 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Ddi2A2ADY9 399 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 JtbO88824 146 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Spsb2O88838 264 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Tcl1aP56280 116 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Art5P70352 309 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Nkx3-2P97503 333 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Serpine2Q07235 397 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Mylk4Q5SUV5 386 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 B630019K06RikQ7TNS5 333 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Gadl1Q80WP8 550 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Spata2lQ8BNN1 426 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr1261Q8VFB0 306 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr768Q8VGC4 312 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr1351Q8VGU6 319 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Nek6Q9ES70 313 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Tinf2Q9QXG9 341 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 H2afb1S4R1E0 115 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 H2afb3S4R1G7 115 aa13.24□□□□□ -0.29
Nup88-202ENSMUST00000108530 Klhl15A2AAX3 604 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Vmn1r152E9Q9N3 307 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Fbxw25F7C9P2 466 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Vmn1r104L7N293 307 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Prl7a1O54830 266 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Hoxb6P09023 224 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Elmod1Q3V1U8 326 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 SypQ62277 314 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Cfap161Q6P8Y0 303 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Nudt15Q8BG93 170 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Nedd4lQ8CFI0 1004 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Vmn1r231Q8R2A3 311 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Seh1lQ8R2U0 360 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Acer2Q8VD53 275 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Thoc3Q8VE80 351 aa13.23□□□□□ -0.29
Nup88-202ENSMUST00000108530 Olfr1277Q8VF41 303 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms