Protein–RNA interactions for Protein: Q9JM61

Thsd1, Thrombospondin type-1 domain-containing protein 1, mousemouse

Predictions only

Length 851 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thsd1Q9JM61 Gm25239-201ENSMUST00000174915 86 ntBASIC34.98■■■■□ 3.19
Thsd1Q9JM61 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Thsd1Q9JM61 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Thsd1Q9JM61 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Thsd1Q9JM61 Gm24109-201ENSMUST00000175489 103 ntBASIC30.56■■■□□ 2.48
Thsd1Q9JM61 Gm15042-201ENSMUST00000120212 883 ntBASIC30.19■■■□□ 2.42
Thsd1Q9JM61 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Thsd1Q9JM61 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Thsd1Q9JM61 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Thsd1Q9JM61 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Thsd1Q9JM61 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Thsd1Q9JM61 Gm15045-201ENSMUST00000117359 883 ntBASIC29.4■■■□□ 2.3
Thsd1Q9JM61 Gm23366-201ENSMUST00000175022 89 ntBASIC29.18■■■□□ 2.26
Thsd1Q9JM61 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Thsd1Q9JM61 Psd-208ENSMUST00000224556 2034 ntBASIC29■■■□□ 2.23
Thsd1Q9JM61 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Thsd1Q9JM61 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.63■■■□□ 2.17
Thsd1Q9JM61 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.39■■■□□ 2.14
Thsd1Q9JM61 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.32■■■□□ 2.12
Thsd1Q9JM61 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Thsd1Q9JM61 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Thsd1Q9JM61 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Thsd1Q9JM61 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Thsd1Q9JM61 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Thsd1Q9JM61 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Thsd1Q9JM61 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Thsd1Q9JM61 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Thsd1Q9JM61 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.79■■■□□ 2.04
Thsd1Q9JM61 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Thsd1Q9JM61 Gm25238-201ENSMUST00000174914 89 ntBASIC27.72■■■□□ 2.03
Thsd1Q9JM61 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Thsd1Q9JM61 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Thsd1Q9JM61 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Thsd1Q9JM61 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Thsd1Q9JM61 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Thsd1Q9JM61 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Thsd1Q9JM61 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Thsd1Q9JM61 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.16■■□□□ 1.94
Thsd1Q9JM61 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
Thsd1Q9JM61 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Thsd1Q9JM61 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Thsd1Q9JM61 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Thsd1Q9JM61 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Thsd1Q9JM61 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Thsd1Q9JM61 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Thsd1Q9JM61 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Thsd1Q9JM61 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Thsd1Q9JM61 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Thsd1Q9JM61 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Thsd1Q9JM61 Gm25262-201ENSMUST00000174934 133 ntBASIC26.8■■□□□ 1.88
Thsd1Q9JM61 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.79■■□□□ 1.88
Thsd1Q9JM61 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.77■■□□□ 1.88
Thsd1Q9JM61 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Thsd1Q9JM61 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Thsd1Q9JM61 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Thsd1Q9JM61 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.53■■□□□ 1.84
Thsd1Q9JM61 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Thsd1Q9JM61 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.48■■□□□ 1.83
Thsd1Q9JM61 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.42■■□□□ 1.82
Thsd1Q9JM61 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.38■■□□□ 1.81
Thsd1Q9JM61 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.38■■□□□ 1.81
Thsd1Q9JM61 Gm27325-201ENSMUST00000175467 74 ntBASIC26.35■■□□□ 1.81
Thsd1Q9JM61 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Thsd1Q9JM61 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
Thsd1Q9JM61 Gm26115-201ENSMUST00000175605 87 ntBASIC26.3■■□□□ 1.8
Thsd1Q9JM61 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.27■■□□□ 1.8
Thsd1Q9JM61 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Thsd1Q9JM61 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Thsd1Q9JM61 Rab21-202ENSMUST00000218831 843 ntBASIC26.16■■□□□ 1.78
Thsd1Q9JM61 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.14■■□□□ 1.78
Thsd1Q9JM61 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.13■■□□□ 1.77
Thsd1Q9JM61 Gm8109-201ENSMUST00000194076 746 ntBASIC26.11■■□□□ 1.77
Thsd1Q9JM61 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Thsd1Q9JM61 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Thsd1Q9JM61 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Thsd1Q9JM61 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.04■■□□□ 1.76
Thsd1Q9JM61 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Thsd1Q9JM61 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Thsd1Q9JM61 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Thsd1Q9JM61 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Thsd1Q9JM61 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.99■■□□□ 1.75
Thsd1Q9JM61 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Thsd1Q9JM61 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Thsd1Q9JM61 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Thsd1Q9JM61 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Thsd1Q9JM61 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Thsd1Q9JM61 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.85■■□□□ 1.73
Thsd1Q9JM61 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.79■■□□□ 1.72
Thsd1Q9JM61 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Thsd1Q9JM61 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Thsd1Q9JM61 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Thsd1Q9JM61 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Thsd1Q9JM61 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.71■■□□□ 1.71
Thsd1Q9JM61 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.67■■□□□ 1.7
Thsd1Q9JM61 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Thsd1Q9JM61 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Thsd1Q9JM61 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Thsd1Q9JM61 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Thsd1Q9JM61 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Thsd1Q9JM61 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms