RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 IGHV4-61A0A0C4DH41 118 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 H3BN98 237 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 LMX1BO60663 402 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 UBL3O95164 117 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 ATP6V1G2O95670 118 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 PPP1R3DO95685 299 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 TACSTD2P09758 323 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 CD79AP11912 226 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 EPHA2P29317 976 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 POLR2IP36954 125 aaKnown RBP11.49□□□□□ -0.57
CTSA-213ENST00000606782 CDKN2AP42771 156 aaKnown RBP11.49□□□□□ -0.57
CTSA-213ENST00000606782 ZNF133P52736 654 aaPredicted RBP11.49□□□□□ -0.57
CTSA-213ENST00000606782 RAB1AP62820 205 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 MYBPC1Q00872 1141 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 PTGES3Q15185 160 aaKnown RBP11.49□□□□□ -0.57
CTSA-213ENST00000606782 MSMPQ1L6U9 139 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 NRN1LQ496H8 165 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 CLEC12AQ5QGZ9 265 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 HDDC2Q7Z4H3 204 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 SKA3Q8IX90 412 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 PACRGLQ8N7B6 248 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 OR2T33Q8NG76 320 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 OR52L1Q8NGH7 329 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 OR4Q3Q8NH05 313 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 TEX47Q8TBZ9 253 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 NRG4Q8WWG1 115 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 ZNF566Q969W8 418 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
CTSA-213ENST00000606782 MSI2Q96DH6 328 aaKnown RBP11.49□□□□□ -0.57
CTSA-213ENST00000606782 MS4A3Q96HJ5 214 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 GABARAPL3Q9BY60 117 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 TBC1D23Q9NUY8 699 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 ENOPH1Q9UHY7 261 aa11.49□□□□□ -0.57
CTSA-213ENST00000606782 DLGAP1O14490 977 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 DHHO43323 396 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 IGHG1P01857 330 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 HMGN1P05114 100 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 SERPINA5P05154 406 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 ERCC1P07992 297 aaPredicted RBP11.48□□□□□ -0.57
CTSA-213ENST00000606782 HIST1H1CP16403 213 aaKnown RBP11.48□□□□□ -0.57
CTSA-213ENST00000606782 POU1F1P28069 291 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 RAD23AP54725 363 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 EFNB1P98172 346 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 PIGFQ07326 219 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 TOP3AQ13472 1001 aaPredicted RBP11.48□□□□□ -0.57
CTSA-213ENST00000606782 RIN1Q13671 783 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 GGTLC2Q14390 218 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 LRRC36Q1X8D7 754 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 MESTQ5EB52 335 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 THEM4Q5T1C6 240 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 KRT80Q6KB66 452 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 SLC27A4Q6P1M0 643 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 PTCHD4Q6ZW05 846 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 ZNF584Q8IVC4 421 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 SLC22A24Q8N4F4 322 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 RASD2Q96D21 266 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 ZNF570Q96NI8 536 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 SNX18Q96RF0 628 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 ALG12Q9BV10 488 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 BEX2Q9BXY8 128 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 MRPL37Q9BZE1 423 aaKnown RBP11.48□□□□□ -0.57
CTSA-213ENST00000606782 BPESC1Q9GZL8 116 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 SLC25A19Q9HC21 320 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 TMEM38BQ9NVV0 291 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 VSX1Q9NZR4 365 aaPredicted RBP11.48□□□□□ -0.57
CTSA-213ENST00000606782 SPEF1Q9Y4P9 236 aa11.48□□□□□ -0.57
CTSA-213ENST00000606782 TEX13CA0A0J9YWL9 993 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 SLC22A23A1A5C7 686 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 PRSS37A4D1T9 235 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 ZAR1LA6NP61 321 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 XKRYO14609 159 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 SYNGR3O43761 229 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 LILRA1O75019 489 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 RAB36O95755 333 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 QDPRP09417 244 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 OR8G3PP0DMU2 310 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 DAOP14920 347 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 ZNF16P17020 682 aaPredicted RBP11.47□□□□□ -0.57
CTSA-213ENST00000606782 PEX2P28328 305 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 NOS3P29474 1203 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 GRK5P34947 590 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 PTDSS1P48651 473 aaKnown RBP11.47□□□□□ -0.57
CTSA-213ENST00000606782 CLRN1P58418 232 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 RPS23P62266 143 aaKnown RBP11.47□□□□□ -0.57
CTSA-213ENST00000606782 KRR1Q13601 381 aaKnown RBP11.47□□□□□ -0.57
CTSA-213ENST00000606782 SLC35F1Q5T1Q4 408 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 TMEM236Q5W0B7 351 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 SLC25A47Q6Q0C1 308 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 ADCK1Q86TW2 530 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 ZCCHC24Q8N2G6 241 aaKnown RBP11.47□□□□□ -0.57
CTSA-213ENST00000606782 GALNT4Q8N4A0 578 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 SYT14Q8NB59 555 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 NPEPL1Q8NDH3 523 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 OR4K13Q8NH42 304 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 FGFBP3Q8TAT2 258 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 FNDC8Q8TC99 324 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 UBASH3BQ8TF42 649 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 HPS1Q92902 700 aa11.47□□□□□ -0.57
CTSA-213ENST00000606782 MCHR2Q969V1 340 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms