RNA–Protein interactions for RNA: snR8

snR8, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR8, Length 190 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR8	snR8	THI21	Q08975	551 aa		3.16	□□□□□ -1.9
snR8	snR8	MVD1	P32377	396 aa	Known RBP	3.15	□□□□□ -1.91
snR8	snR8	PHO11	P35842	467 aa		3.15	□□□□□ -1.91
snR8	snR8	YBR284W	P38150	797 aa		3.15	□□□□□ -1.91
snR8	snR8	PHO12	P38693	467 aa		3.15	□□□□□ -1.91
snR8	snR8	FMP30	Q02883	468 aa		3.15	□□□□□ -1.91
snR8	snR8	LRS4	Q04087	347 aa	Known RBP	3.15	□□□□□ -1.91
snR8	snR8	MLH3	Q12083	715 aa		3.15	□□□□□ -1.91
snR8	snR8	RPA135	P22138	1203 aa	Known RBP	3.14	□□□□□ -1.91
snR8	snR8	APN1	P22936	367 aa		3.14	□□□□□ -1.91
snR8	snR8	STE5	P32917	917 aa		3.14	□□□□□ -1.91
snR8	snR8	LYS9	P38999	446 aa		3.14	□□□□□ -1.91
snR8	snR8	ECM1	P39715	212 aa		3.14	□□□□□ -1.91
snR8	snR8	PRP9	P19736	530 aa	Known RBP	3.13	□□□□□ -1.91
snR8	snR8	MTR3	P48240	250 aa	Predicted RBP	3.13	□□□□□ -1.91
snR8	snR8	TAD1	P53065	400 aa		3.13	□□□□□ -1.91
snR8	snR8	FUB1	P25659	250 aa		3.12	□□□□□ -1.91
snR8	snR8	CDC11	P32458	415 aa		3.12	□□□□□ -1.91
snR8	snR8	SAP190	P36123	1033 aa		3.12	□□□□□ -1.91
snR8	snR8	PET10	P36139	283 aa		3.12	□□□□□ -1.91
snR8	snR8	NUP60	P39705	539 aa		3.12	□□□□□ -1.91
snR8	snR8	NIT3	P49954	291 aa		3.12	□□□□□ -1.91
snR8	snR8	RGC1	Q06108	1083 aa	Known RBP	3.12	□□□□□ -1.91
snR8	snR8	PIN2	Q12057	282 aa		3.12	□□□□□ -1.91
snR8	snR8	MSD1	P15179	658 aa	Known RBP	3.11	□□□□□ -1.91
snR8	snR8	THR1	P17423	357 aa	Known RBP	3.11	□□□□□ -1.91
snR8	snR8	MBR1	P23493	339 aa		3.11	□□□□□ -1.91
snR8	snR8	GMH1	P36125	273 aa		3.11	□□□□□ -1.91
snR8	snR8	PFD1	P46988	109 aa		3.11	□□□□□ -1.91
snR8	snR8	STP1	Q00947	519 aa		3.11	□□□□□ -1.91
snR8	snR8	CTK1	Q03957	528 aa	Known RBP	3.11	□□□□□ -1.91
snR8	snR8	STE12	P13574	688 aa		3.1	□□□□□ -1.91
snR8	snR8	USV1	Q12132	391 aa		3.1	□□□□□ -1.91
snR8	snR8	ADE5,7	P07244	802 aa	Known RBP	3.09	□□□□□ -1.91
snR8	snR8	SAT4	P25333	603 aa	Known RBP	3.09	□□□□□ -1.91
snR8	snR8	YMC1	P32331	307 aa		3.09	□□□□□ -1.91
snR8	snR8	SET3	P36124	751 aa		3.09	□□□□□ -1.91
snR8	snR8	YHR112C	P38716	378 aa		3.09	□□□□□ -1.91
snR8	snR8	SET5	P38890	526 aa	Known RBP	3.09	□□□□□ -1.91
snR8	snR8	MAD1	P40957	749 aa		3.09	□□□□□ -1.91
snR8	snR8	ALR2	P43553	858 aa		3.09	□□□□□ -1.91
snR8	snR8	TAX4	P47030	604 aa		3.09	□□□□□ -1.91
snR8	snR8	PRP31	P49704	494 aa	Predicted RBP	3.09	□□□□□ -1.91
snR8	snR8	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
snR8	snR8	EAF1	Q06337	982 aa		3.09	□□□□□ -1.91
snR8	snR8	KCC4	P25389	1037 aa		3.08	□□□□□ -1.92
snR8	snR8	EMC3	P36039	253 aa		3.08	□□□□□ -1.92
snR8	snR8	YMC2	P38087	329 aa		3.08	□□□□□ -1.92
snR8	snR8	YBR184W	P38299	523 aa		3.08	□□□□□ -1.92
snR8	snR8	ULP2	P40537	1034 aa	Predicted RBP	3.08	□□□□□ -1.92
snR8	snR8	ZIP2	P53061	704 aa		3.08	□□□□□ -1.92
snR8	snR8	HFD1	Q04458	532 aa		3.08	□□□□□ -1.92
snR8	snR8	ZRT2	Q12436	422 aa		3.08	□□□□□ -1.92
snR8	snR8	HBN1	Q96VH4	193 aa		3.08	□□□□□ -1.92
snR8	snR8	SCT1	P32784	759 aa		3.07	□□□□□ -1.92
snR8	snR8	UGP1	P32861	499 aa	Known RBP	3.07	□□□□□ -1.92
snR8	snR8	SPF1	P39986	1215 aa	Known RBP	3.07	□□□□□ -1.92
snR8	snR8	CCT5	P40413	562 aa	Known RBP	3.07	□□□□□ -1.92
snR8	snR8	YBP2	P53169	641 aa		3.07	□□□□□ -1.92
snR8	snR8	YBR182C-A	Q8TGU6	64 aa		3.07	□□□□□ -1.92
snR8	snR8	HRP1	Q99383	534 aa	Known RBP	3.07	□□□□□ -1.92
snR8	snR8	ADE2	P21264	571 aa	Known RBP	3.06	□□□□□ -1.92
snR8	snR8	ERG6	P25087	383 aa	Known RBP	3.06	□□□□□ -1.92
snR8	snR8	TRZ1	P36159	838 aa	Predicted RBP	3.06	□□□□□ -1.92
snR8	snR8	PMC1	P38929	1173 aa	Predicted RBP	3.06	□□□□□ -1.92
snR8	snR8	MIT1	P40002	666 aa		3.06	□□□□□ -1.92
snR8	snR8	GYP8	P43570	497 aa		3.06	□□□□□ -1.92
snR8	snR8	IRC8	P47046	822 aa		3.06	□□□□□ -1.92
snR8	snR8	UTP8	P53276	713 aa	Known RBP	3.06	□□□□□ -1.92
snR8	snR8	PHO5	P00635	467 aa		3.05	□□□□□ -1.92
snR8	snR8	APL2	P36000	726 aa	Predicted RBP	3.05	□□□□□ -1.92
snR8	snR8	PSA1	P41940	361 aa	Known RBP	3.05	□□□□□ -1.92
snR8	snR8	YGR283C	P53336	341 aa	Predicted RBP	3.05	□□□□□ -1.92
snR8	snR8	SPC98	P53540	846 aa		3.05	□□□□□ -1.92
snR8	snR8	FMP25	Q08023	583 aa		3.05	□□□□□ -1.92
snR8	snR8	NOP1	P15646	327 aa	Known RBP	3.04	□□□□□ -1.92
snR8	snR8	ARG5,6	Q01217	863 aa		3.04	□□□□□ -1.92
snR8	snR8	UBX5	Q06682	500 aa		3.04	□□□□□ -1.92
snR8	snR8	REH1	Q06709	432 aa		3.04	□□□□□ -1.92
snR8	snR8	ULA1	Q12059	462 aa		3.04	□□□□□ -1.92
snR8	snR8	CLF1	Q12309	687 aa	Predicted RBP	3.04	□□□□□ -1.92
snR8	snR8	ECM32	P32644	1121 aa	Known RBP	3.03	□□□□□ -1.92
snR8	snR8	HOT13	P36078	116 aa		3.03	□□□□□ -1.92
snR8	snR8	CRP1	P38845	465 aa	Known RBP	3.03	□□□□□ -1.92
snR8	snR8	SHR5	P41912	237 aa		3.03	□□□□□ -1.92
snR8	snR8	ASN1	P49089	572 aa	Known RBP	3.03	□□□□□ -1.92
snR8	snR8	YGR151C	P53287	111 aa		3.03	□□□□□ -1.92
snR8	snR8	TDA5	Q06417	326 aa	Known RBP	3.03	□□□□□ -1.92
snR8	snR8	GET2	P40056	285 aa		3.02	□□□□□ -1.93
snR8	snR8	RLP7	P40693	322 aa	Known RBP	3.02	□□□□□ -1.93
snR8	snR8	HXT16	P47185	567 aa		3.02	□□□□□ -1.93
snR8	snR8	YML020W	Q03722	664 aa		3.02	□□□□□ -1.93
snR8	snR8	MCM21	Q06675	368 aa		3.02	□□□□□ -1.93
snR8	snR8	NOP8	Q08287	484 aa	Predicted RBP	3.02	□□□□□ -1.93
snR8	snR8	NAP1	P25293	417 aa	Known RBP	3.01	□□□□□ -1.93
snR8	snR8	KSP1	P38691	1029 aa	Known RBP	3.01	□□□□□ -1.93
snR8	snR8	UBP6	P43593	499 aa	Known RBP	3.01	□□□□□ -1.93
snR8	snR8	ZDS1	P50111	915 aa	Known RBP	3.01	□□□□□ -1.93
snR8	snR8	YDR514C	Q04408	483 aa		3.01	□□□□□ -1.93
snR8	snR8	DIF1	O13577	133 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms